FFCP PHASE1:Hg19::chr11:48029316..48029335,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002057!3.75e-100!42;CL:0000860!5.81e-93!45;CL:0000766!6.65e-66!76;CL:0002194!4.53e-63!63;CL:0000576!4.53e-63!63;CL:0000040!4.53e-63!63;CL:0000559!4.53e-63!63;CL:0002009!6.33e-61!65;CL:0000839!4.34e-56!70;CL:0000557!3.34e-55!71;CL:0000763!3.00e-42!112;CL:0000049!3.00e-42!112;CL:0000738!5.18e-41!140;CL:0002087!3.61e-39!119;CL:0000037!8.67e-32!172;CL:0000566!8.67e-32!172;CL:0002031!1.50e-30!124;CL:0000988!1.45e-29!182;CL:0002032!8.11e-28!165;CL:0000837!8.11e-28!165;CL:0002393!9.25e-17!9;CL:0002397!9.25e-17!9;CL:0000842!2.74e-13!3;CL:0000134!1.41e-11!358;CL:0002320!3.50e-11!365;CL:0000224!4.42e-10!4;CL:0000219!8.63e-10!390;CL:0000094!1.02e-08!8;CL:0000034!2.77e-08!444;CL:0000048!3.97e-08!430;CL:0000723!6.83e-08!436;CL:0000080!7.46e-07!6 | |ontology_enrichment_celltype=CL:0002057!3.75e-100!42;CL:0000860!5.81e-93!45;CL:0000766!6.65e-66!76;CL:0002194!4.53e-63!63;CL:0000576!4.53e-63!63;CL:0000040!4.53e-63!63;CL:0000559!4.53e-63!63;CL:0002009!6.33e-61!65;CL:0000839!4.34e-56!70;CL:0000557!3.34e-55!71;CL:0000763!3.00e-42!112;CL:0000049!3.00e-42!112;CL:0000738!5.18e-41!140;CL:0002087!3.61e-39!119;CL:0000037!8.67e-32!172;CL:0000566!8.67e-32!172;CL:0002031!1.50e-30!124;CL:0000988!1.45e-29!182;CL:0002032!8.11e-28!165;CL:0000837!8.11e-28!165;CL:0002393!9.25e-17!9;CL:0002397!9.25e-17!9;CL:0000842!2.74e-13!3;CL:0000134!1.41e-11!358;CL:0002320!3.50e-11!365;CL:0000224!4.42e-10!4;CL:0000219!8.63e-10!390;CL:0000094!1.02e-08!8;CL:0000034!2.77e-08!444;CL:0000048!3.97e-08!430;CL:0000723!6.83e-08!436;CL:0000080!7.46e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-38;33!CL:0002057;1.43e-38;33!CL:0000473;1.98e-27;39!CL:0000234;1.98e-27;39!CL:0000576;1.46e-25;48!CL:0000766;3.96e-23;69!CL:0002393;9.45e-13;6!CL:0002397;9.45e-13;6!CL:0000226;5.15e-11;3!CL:0000842;5.15e-11;3!CL:0002087;1.45e-10;104!CL:0000763;2.84e-09;100!CL:0000094;3.55e-09;8!CL:0000738;5.45e-08;136!CL:0000081;8.47e-07;11 | |ontology_enrichment_celltype_v019=CL:0000860;1.43e-38;33!CL:0002057;1.43e-38;33!CL:0000473;1.98e-27;39!CL:0000234;1.98e-27;39!CL:0000576;1.46e-25;48!CL:0000766;3.96e-23;69!CL:0002393;9.45e-13;6!CL:0002397;9.45e-13;6!CL:0000226;5.15e-11;3!CL:0000842;5.15e-11;3!CL:0002087;1.45e-10;104!CL:0000763;2.84e-09;100!CL:0000094;3.55e-09;8!CL:0000738;5.45e-08;136!CL:0000081;8.47e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.26e-50,42;CL:0002057,5.26e-50,42;CL:0000473,2.22e-43,48;CL:0000234,2.22e-43,48;CL:0000766,1.07e-38,72;CL:0002194,4.25e-34,59;CL:0000576,4.25e-34,59;CL:0000040,4.25e-34,59;CL:0000559,4.25e-34,59;CL:0002009,6.72e-33,61;CL:0000839,3.24e-30,66;CL:0000557,1.00e-29,67;CL:0000763,9.20e-25,108;CL:0000049,9.20e-25,108;CL:0000738,1.71e-23,136;CL:0002087,1.29e-20,115;CL:0000037,2.51e-18,168;CL:0000988,3.30e-17,177;CL:0002032,1.72e-15,161;CL:0000837,1.72e-15,161;CL:0002031,2.43e-15,120;CL:0000226,3.25e-11,3;CL:0000842,3.25e-11,3;CL:0000094,3.66e-09,8;CL:0002393,1.14e-08,9;CL:0002397,1.14e-08,9;CL:0000134,1.49e-07,354;CL:0002320,2.50e-07,361;CL:0000081,8.65e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;8.26e-32;42!CL:0000049;2.58e-07;108 | |ontology_enrichment_development_v019=CL:0002057;8.26e-32;42!CL:0000049;2.58e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.84e-62!102;UBERON:0003061!1.84e-62!102;UBERON:0002193!3.77e-56!112;UBERON:0002371!3.30e-48!80;UBERON:0001474!2.39e-44!86;UBERON:0004765!1.10e-36!101;UBERON:0001434!1.10e-36!101;UBERON:0002405!8.16e-36!115;UBERON:0003081!5.93e-25!216;UBERON:0002204!3.03e-19!167;UBERON:0000178!1.05e-16!15;UBERON:0000179!1.05e-16!15;UBERON:0000463!1.05e-16!15;UBERON:0002384!1.21e-10!375;UBERON:0000926!4.41e-08!448;UBERON:0004120!4.41e-08!448;UBERON:0006603!4.41e-08!448 | |ontology_enrichment_uberon=UBERON:0002390!1.84e-62!102;UBERON:0003061!1.84e-62!102;UBERON:0002193!3.77e-56!112;UBERON:0002371!3.30e-48!80;UBERON:0001474!2.39e-44!86;UBERON:0004765!1.10e-36!101;UBERON:0001434!1.10e-36!101;UBERON:0002405!8.16e-36!115;UBERON:0003081!5.93e-25!216;UBERON:0002204!3.03e-19!167;UBERON:0000178!1.05e-16!15;UBERON:0000179!1.05e-16!15;UBERON:0000463!1.05e-16!15;UBERON:0002384!1.21e-10!375;UBERON:0000926!4.41e-08!448;UBERON:0004120!4.41e-08!448;UBERON:0006603!4.41e-08!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-08;15!UBERON:0000179;2.03e-08;15!UBERON:0000463;2.03e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-08;15!UBERON:0000179;2.03e-08;15!UBERON:0000463;2.03e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.16e-31,98;UBERON:0003061,8.16e-31,98;UBERON:0002193,1.18e-27,108;UBERON:0002371,6.84e-26,76;UBERON:0001474,8.52e-24,82;UBERON:0004765,1.97e-21,90;UBERON:0002405,1.20e-20,93;UBERON:0001434,5.32e-19,100;UBERON:0003081,4.77e-13,203;UBERON:0002204,3.63e-10,167;UBERON:0000178,1.67e-08,15;UBERON:0000179,1.67e-08,15;UBERON:0000463,1.67e-08,15;UBERON:0000926,4.59e-07,315;UBERON:0004120,4.59e-07,315;UBERON:0006603,4.59e-07,315;UBERON:0002384,5.09e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0,0,0,0,0,0,0,4.9859586767869,11.2304890583279,10.4165217943609,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,0.512321413058201,1.18241114944293,4.13694816883942,2.5819387343353,1.35426486594342,0.188242339542605,0,0.224723484445085,2.44867113896722,4.17207735198922,2.55734850319616,0,0.199463657621632,1.27867425159808,1.16083695451434,1.13477044938228,1.24564449799115,0,1.0429658368404,0.65156653411535,0,2.20966581592539,1.89877432464531,0.422510572623884,0.637812899895131,0.838634582033504,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.50999940573032,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,2.29391162142713,0,0.476463550915578,0,0,2.70015718619057,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0,0,0,0,0,0,0,4.9859586767869,11.2304890583279,10.4165217943609,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,0.512321413058201,1.18241114944293,4.13694816883942,2.5819387343353,1.35426486594342,0.188242339542605,0,0.224723484445085,2.44867113896722,4.17207735198922,2.55734850319616,0,0.199463657621632,1.27867425159808,1.16083695451434,1.13477044938228,1.24564449799115,0,1.0429658368404,0.65156653411535,0,2.20966581592539,1.89877432464531,0.422510572623884,0.637812899895131,0.838634582033504,0.112328631146495,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.50999940573032,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,2.29391162142713,0,0.476463550915578,0,0,2.70015718619057,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:48029316..48029335,- | |short_description=p@chr11:48029316..48029335,- | ||
}} | }} |
Revision as of 14:40, 17 November 2012
Short description: | p@chr11:48029316..48029335, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:48029316..48029335, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.26e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.26e-50 | 42 |
defensive cell | 2.22e-43 | 48 |
phagocyte | 2.22e-43 | 48 |
myeloid leukocyte | 1.07e-38 | 72 |
monopoietic cell | 4.25e-34 | 59 |
monocyte | 4.25e-34 | 59 |
monoblast | 4.25e-34 | 59 |
promonocyte | 4.25e-34 | 59 |
macrophage dendritic cell progenitor | 6.72e-33 | 61 |
myeloid lineage restricted progenitor cell | 3.24e-30 | 66 |
granulocyte monocyte progenitor cell | 1.00e-29 | 67 |
myeloid cell | 9.20e-25 | 108 |
common myeloid progenitor | 9.20e-25 | 108 |
leukocyte | 1.71e-23 | 136 |
nongranular leukocyte | 1.29e-20 | 115 |
hematopoietic stem cell | 2.51e-18 | 168 |
hematopoietic cell | 3.30e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.72e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 2.43e-15 | 120 |
single nucleate cell | 3.25e-11 | 3 |
mononuclear cell | 3.25e-11 | 3 |
granulocyte | 3.66e-09 | 8 |
intermediate monocyte | 1.14e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.14e-08 | 9 |
mesenchymal cell | 1.49e-07 | 354 |
connective tissue cell | 2.50e-07 | 361 |
blood cell | 8.65e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.16e-31 | 98 |
blood island | 8.16e-31 | 98 |
hemolymphoid system | 1.18e-27 | 108 |
bone marrow | 6.84e-26 | 76 |
bone element | 8.52e-24 | 82 |
skeletal element | 1.97e-21 | 90 |
immune system | 1.20e-20 | 93 |
skeletal system | 5.32e-19 | 100 |
lateral plate mesoderm | 4.77e-13 | 203 |
musculoskeletal system | 3.63e-10 | 167 |
blood | 1.67e-08 | 15 |
haemolymphatic fluid | 1.67e-08 | 15 |
organism substance | 1.67e-08 | 15 |
mesoderm | 4.59e-07 | 315 |
mesoderm-derived structure | 4.59e-07 | 315 |
presumptive mesoderm | 4.59e-07 | 315 |
connective tissue | 5.09e-07 | 371 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.