FFCP PHASE1:Hg19::chr21:36260495..36260506,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!4.37e-11!42;CL:0000860!1.73e-09!45;CL:0002320!2.33e-08!365;CL:0000134!1.78e-07!358;CL:0000766!1.85e-07!76;CL:0000839!4.62e-07!70;CL:0000557!4.73e-07!71;CL:0000763!5.36e-07!112;CL:0000049!5.36e-07!112;CL:0000219!7.63e-07!390;CL:0002194!9.76e-07!63;CL:0000576!9.76e-07!63;CL:0000040!9.76e-07!63;CL:0000559!9.76e-07!63 | |ontology_enrichment_celltype=CL:0002057!4.37e-11!42;CL:0000860!1.73e-09!45;CL:0002320!2.33e-08!365;CL:0000134!1.78e-07!358;CL:0000766!1.85e-07!76;CL:0000839!4.62e-07!70;CL:0000557!4.73e-07!71;CL:0000763!5.36e-07!112;CL:0000049!5.36e-07!112;CL:0000219!7.63e-07!390;CL:0002194!9.76e-07!63;CL:0000576!9.76e-07!63;CL:0000040!9.76e-07!63;CL:0000559!9.76e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.45e-16;3!CL:0000860;3.35e-10;33!CL:0002057;3.35e-10;33!CL:0000767;1.20e-07;3!CL:0000473;3.82e-07;39!CL:0000234;3.82e-07;39 | |ontology_enrichment_celltype_v019=CL:0000784;3.45e-16;3!CL:0000860;3.35e-10;33!CL:0002057;3.35e-10;33!CL:0000767;1.20e-07;3!CL:0000473;3.82e-07;39!CL:0000234;3.82e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,7.56e-17,3;CL:0000766,1.01e-10,72;CL:0000860,3.57e-10,42;CL:0002057,3.57e-10,42;CL:0000557,5.91e-10,67;CL:0000738,3.41e-09,136;CL:0000473,1.12e-08,48;CL:0000234,1.12e-08,48;CL:0000037,1.20e-08,168;CL:0000839,1.51e-08,66;CL:0000763,1.59e-08,108;CL:0000049,1.59e-08,108;CL:0002194,4.10e-08,59;CL:0000576,4.10e-08,59;CL:0000040,4.10e-08,59;CL:0000559,4.10e-08,59;CL:0000988,5.55e-08,177;CL:0000767,7.04e-08,3;CL:0002009,8.72e-08,61;CL:0000134,3.16e-07,354;CL:0002032,3.84e-07,161;CL:0000837,3.84e-07,161;CL:0002320,5.81e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.13e-09;42 | |ontology_enrichment_development_v019=CL:0002057;3.13e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.62e-08!375;UBERON:0002390!1.16e-07!102;UBERON:0003061!1.16e-07!102 | |ontology_enrichment_uberon=UBERON:0002384!1.62e-08!375;UBERON:0002390!1.16e-07!102;UBERON:0003061!1.16e-07!102 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.15e-10,76;UBERON:0001474,4.42e-09,82;UBERON:0004765,4.95e-08,90;UBERON:0002405,1.10e-07,93;UBERON:0002384,2.61e-07,371;UBERON:0002390,3.72e-07,98;UBERON:0003061,3.72e-07,98;UBERON:0001434,5.85e-07,100 | |||
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| ||
|short_description=p23@RUNX1 | |short_description=p23@RUNX1 | ||
}} | }} |
Revision as of 07:27, 18 November 2012
Short description: | p23@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_RUNX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 480bp_to_ENST00000344691, ENST00000358356, NM_001001890, NM_001122607, uc002yuh.2, uc002yui.2, uc002yuo.1_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | Q01196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 7.56e-17 | 3 |
myeloid leukocyte | 1.01e-10 | 72 |
classical monocyte | 3.57e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.57e-10 | 42 |
granulocyte monocyte progenitor cell | 5.91e-10 | 67 |
leukocyte | 3.41e-09 | 136 |
defensive cell | 1.12e-08 | 48 |
phagocyte | 1.12e-08 | 48 |
hematopoietic stem cell | 1.20e-08 | 168 |
myeloid lineage restricted progenitor cell | 1.51e-08 | 66 |
myeloid cell | 1.59e-08 | 108 |
common myeloid progenitor | 1.59e-08 | 108 |
monopoietic cell | 4.10e-08 | 59 |
monocyte | 4.10e-08 | 59 |
monoblast | 4.10e-08 | 59 |
promonocyte | 4.10e-08 | 59 |
hematopoietic cell | 5.55e-08 | 177 |
basophil | 7.04e-08 | 3 |
macrophage dendritic cell progenitor | 8.72e-08 | 61 |
mesenchymal cell | 3.16e-07 | 354 |
hematopoietic oligopotent progenitor cell | 3.84e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.84e-07 | 161 |
connective tissue cell | 5.81e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.15e-10 | 76 |
bone element | 4.42e-09 | 82 |
skeletal element | 4.95e-08 | 90 |
immune system | 1.10e-07 | 93 |
connective tissue | 2.61e-07 | 371 |
hematopoietic system | 3.72e-07 | 98 |
blood island | 3.72e-07 | 98 |
skeletal system | 5.85e-07 | 100 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.