FFCP PHASE1:Hg19::chr12:12510270..12510289,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!1.52e-34!140;CL:0002087!1.36e-26!119;CL:0002031!1.78e-25!124;CL:0000988!1.97e-25!182;CL:0000037!3.46e-25!172;CL:0000566!3.46e-25!172;CL:0002032!5.90e-23!165;CL:0000837!5.90e-23!165;CL:0000766!3.03e-21!76;CL:0002057!8.93e-20!42;CL:0000860!1.93e-18!45;CL:0000557!2.14e-18!71;CL:0002009!1.12e-16!65;CL:0002194!1.08e-15!63;CL:0000576!1.08e-15!63;CL:0000040!1.08e-15!63;CL:0000559!1.08e-15!63;CL:0000839!1.56e-15!70;CL:0000763!1.86e-13!112;CL:0000049!1.86e-13!112;CL:0000542!1.82e-09!53;CL:0000051!1.82e-09!53;CL:0000838!3.10e-09!52 | |ontology_enrichment_celltype=CL:0000738!1.52e-34!140;CL:0002087!1.36e-26!119;CL:0002031!1.78e-25!124;CL:0000988!1.97e-25!182;CL:0000037!3.46e-25!172;CL:0000566!3.46e-25!172;CL:0002032!5.90e-23!165;CL:0000837!5.90e-23!165;CL:0000766!3.03e-21!76;CL:0002057!8.93e-20!42;CL:0000860!1.93e-18!45;CL:0000557!2.14e-18!71;CL:0002009!1.12e-16!65;CL:0002194!1.08e-15!63;CL:0000576!1.08e-15!63;CL:0000040!1.08e-15!63;CL:0000559!1.08e-15!63;CL:0000839!1.56e-15!70;CL:0000763!1.86e-13!112;CL:0000049!1.86e-13!112;CL:0000542!1.82e-09!53;CL:0000051!1.82e-09!53;CL:0000838!3.10e-09!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-20;33!CL:0002057;1.19e-20;33!CL:0000473;1.29e-16;39!CL:0000234;1.29e-16;39!CL:0000576;1.70e-16;48!CL:0000766;2.53e-15;69!CL:0002087;8.32e-13;104!CL:0000738;9.83e-12;136!CL:0000094;3.37e-11;8!CL:0000624;4.21e-10;6!CL:0000081;7.55e-10;11!CL:0000451;6.81e-09;10!CL:0000840;2.10e-08;5!CL:0002393;3.61e-08;6!CL:0002397;3.61e-08;6!CL:0000988;1.69e-07;177!CL:0000542;2.38e-07;53!CL:0000990;8.80e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;1.19e-20;33!CL:0002057;1.19e-20;33!CL:0000473;1.29e-16;39!CL:0000234;1.29e-16;39!CL:0000576;1.70e-16;48!CL:0000766;2.53e-15;69!CL:0002087;8.32e-13;104!CL:0000738;9.83e-12;136!CL:0000094;3.37e-11;8!CL:0000624;4.21e-10;6!CL:0000081;7.55e-10;11!CL:0000451;6.81e-09;10!CL:0000840;2.10e-08;5!CL:0002393;3.61e-08;6!CL:0002397;3.61e-08;6!CL:0000988;1.69e-07;177!CL:0000542;2.38e-07;53!CL:0000990;8.80e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.12e-55,136;CL:0000988,7.56e-43,177;CL:0000037,3.09e-42,168;CL:0002087,4.49e-42,115;CL:0002031,3.11e-41,120;CL:0002032,5.55e-38,161;CL:0000837,5.55e-38,161;CL:0000766,1.50e-37,72;CL:0000557,6.73e-32,67;CL:0000860,1.26e-31,42;CL:0002057,1.26e-31,42;CL:0000473,9.25e-30,48;CL:0000234,9.25e-30,48;CL:0002009,9.92e-30,61;CL:0002194,9.26e-28,59;CL:0000576,9.26e-28,59;CL:0000040,9.26e-28,59;CL:0000559,9.26e-28,59;CL:0000839,1.81e-27,66;CL:0000763,4.67e-25,108;CL:0000049,4.67e-25,108;CL:0000838,4.74e-12,52;CL:0000542,1.14e-11,53;CL:0000051,1.14e-11,53;CL:0002393,1.64e-11,9;CL:0002397,1.64e-11,9;CL:0000094,2.59e-11,8;CL:0000624,4.50e-10,6;CL:0000081,6.12e-10,11;CL:0000451,8.38e-09,10;CL:0000134,1.63e-08,354;CL:0000840,2.37e-08,5;CL:0001029,2.37e-08,5;CL:0002320,6.25e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.83e-23;42!CL:0000051;2.38e-07;53!CL:0000049;3.27e-07;108 | |ontology_enrichment_development_v019=CL:0002057;2.83e-23;42!CL:0000051;2.38e-07;53!CL:0000049;3.27e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.47e-18!102;UBERON:0003061!1.47e-18!102;UBERON:0002371!2.72e-16!80;UBERON:0001474!4.01e-15!86;UBERON:0002193!9.15e-15!112;UBERON:0004765!1.04e-11!101;UBERON:0001434!1.04e-11!101;UBERON:0002405!1.97e-09!115;UBERON:0002780!3.57e-08!41;UBERON:0001890!3.57e-08!41;UBERON:0006240!3.57e-08!41;UBERON:0001893!8.75e-08!34;UBERON:0003080!1.18e-07!42;UBERON:0002020!1.45e-07!34;UBERON:0003528!1.45e-07!34;UBERON:0001869!1.89e-07!32;UBERON:0002791!2.12e-07!33;UBERON:0001950!2.13e-07!20;UBERON:0001049!2.64e-07!57;UBERON:0005068!2.64e-07!57;UBERON:0006241!2.64e-07!57;UBERON:0007135!2.64e-07!57 | |ontology_enrichment_uberon=UBERON:0002390!1.47e-18!102;UBERON:0003061!1.47e-18!102;UBERON:0002371!2.72e-16!80;UBERON:0001474!4.01e-15!86;UBERON:0002193!9.15e-15!112;UBERON:0004765!1.04e-11!101;UBERON:0001434!1.04e-11!101;UBERON:0002405!1.97e-09!115;UBERON:0002780!3.57e-08!41;UBERON:0001890!3.57e-08!41;UBERON:0006240!3.57e-08!41;UBERON:0001893!8.75e-08!34;UBERON:0003080!1.18e-07!42;UBERON:0002020!1.45e-07!34;UBERON:0003528!1.45e-07!34;UBERON:0001869!1.89e-07!32;UBERON:0002791!2.12e-07!33;UBERON:0001950!2.13e-07!20;UBERON:0001049!2.64e-07!57;UBERON:0005068!2.64e-07!57;UBERON:0006241!2.64e-07!57;UBERON:0007135!2.64e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.40e-11;20!UBERON:0002619;9.41e-10;22!UBERON:0001869;1.58e-09;32!UBERON:0002791;7.09e-09;32!UBERON:0001893;8.49e-09;34!UBERON:0000956;3.69e-08;25!UBERON:0000203;3.69e-08;25!UBERON:0003528;9.78e-08;34!UBERON:0002020;9.78e-08;34 | |ontology_enrichment_uberon_v019=UBERON:0001950;4.40e-11;20!UBERON:0002619;9.41e-10;22!UBERON:0001869;1.58e-09;32!UBERON:0002791;7.09e-09;32!UBERON:0001893;8.49e-09;34!UBERON:0000956;3.69e-08;25!UBERON:0000203;3.69e-08;25!UBERON:0003528;9.78e-08;34!UBERON:0002020;9.78e-08;34 | ||
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| ||
|short_description=p5@LOH12CR1 | |short_description=p5@LOH12CR1 | ||
}} | }} |
Revision as of 16:25, 18 November 2012
Short description: | p5@LOH12CR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LOH12CR1_5end |
Coexpression cluster: | C890_CD19_CD4_Peripheral_CD8_Natural_Dendritic_Mast |
Association with transcript: | -2bp_to_ENST00000543990_5end |
EntrezGene: | LOH12CR1 |
HGNC: | 17950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.25e-27 | 98 |
blood island | 1.25e-27 | 98 |
bone marrow | 2.53e-26 | 76 |
hemolymphoid system | 2.07e-24 | 108 |
bone element | 2.20e-24 | 82 |
immune system | 5.08e-21 | 93 |
skeletal element | 6.87e-21 | 90 |
skeletal system | 2.58e-18 | 100 |
neocortex | 2.87e-11 | 20 |
cerebral hemisphere | 7.00e-11 | 32 |
telencephalon | 6.16e-10 | 34 |
regional part of cerebral cortex | 6.43e-10 | 22 |
regional part of telencephalon | 1.07e-09 | 32 |
regional part of forebrain | 3.88e-09 | 41 |
forebrain | 3.88e-09 | 41 |
anterior neural tube | 3.88e-09 | 41 |
future forebrain | 3.88e-09 | 41 |
brain grey matter | 7.64e-09 | 34 |
gray matter | 7.64e-09 | 34 |
cerebral cortex | 2.67e-08 | 25 |
pallium | 2.67e-08 | 25 |
lateral plate mesoderm | 1.90e-07 | 203 |
connective tissue | 3.76e-07 | 371 |
musculoskeletal system | 4.88e-07 | 167 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.