FFCP PHASE1:Hg19::chr10:18940501..18940583,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!5.71e-21!172;CL:0000566!5.71e-21!172;CL:0002032!2.08e-20!165;CL:0000837!2.08e-20!165;CL:0000988!9.65e-18!182;CL:0000738!7.82e-16!140;CL:0002031!1.20e-14!124;CL:0000542!1.71e-13!53;CL:0000051!1.71e-13!53;CL:0000838!5.57e-13!52;CL:0002087!8.29e-13!119;CL:0000945!1.53e-09!24;CL:0000826!1.53e-09!24;CL:0000763!1.26e-08!112;CL:0000049!1.26e-08!112 | |ontology_enrichment_celltype=CL:0000037!5.71e-21!172;CL:0000566!5.71e-21!172;CL:0002032!2.08e-20!165;CL:0000837!2.08e-20!165;CL:0000988!9.65e-18!182;CL:0000738!7.82e-16!140;CL:0002031!1.20e-14!124;CL:0000542!1.71e-13!53;CL:0000051!1.71e-13!53;CL:0000838!5.57e-13!52;CL:0002087!8.29e-13!119;CL:0000945!1.53e-09!24;CL:0000826!1.53e-09!24;CL:0000763!1.26e-08!112;CL:0000049!1.26e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.21e-09;24!CL:0000542;4.46e-08;53 | |ontology_enrichment_celltype_v019=CL:0000945;1.21e-09;24!CL:0000542;4.46e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.25e-20,168;CL:0002032,4.49e-20,161;CL:0000837,4.49e-20,161;CL:0000988,5.48e-18,177;CL:0000738,1.59e-15,136;CL:0002031,2.34e-14,120;CL:0000542,1.71e-13,53;CL:0000051,1.71e-13,53;CL:0000838,5.54e-13,52;CL:0002087,1.61e-12,115;CL:0000945,1.52e-09,24;CL:0000826,1.52e-09,24;CL:0000763,2.41e-08,108;CL:0000049,2.41e-08,108 | |||
|ontology_enrichment_development_v019=CL:0000051;4.46e-08;53 | |ontology_enrichment_development_v019=CL:0000051;4.46e-08;53 | ||
|ontology_enrichment_disease=DOID:162!4.03e-08!235;DOID:2531!4.09e-08!51;DOID:0060083!4.09e-08!51;DOID:14566!2.09e-07!239 | |ontology_enrichment_disease=DOID:162!4.03e-08!235;DOID:2531!4.09e-08!51;DOID:0060083!4.09e-08!51;DOID:14566!2.09e-07!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,4.02e-08,235;DOID:2531,4.08e-08,51;DOID:0060083,4.08e-08,51;DOID:14566,2.08e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.17e-09!115;UBERON:0001017!7.53e-07!82;UBERON:0002780!9.57e-07!41;UBERON:0001890!9.57e-07!41;UBERON:0006240!9.57e-07!41 | |ontology_enrichment_uberon=UBERON:0007023!7.17e-09!115;UBERON:0001017!7.53e-07!82;UBERON:0002780!9.57e-07!41;UBERON:0001890!9.57e-07!41;UBERON:0006240!9.57e-07!41 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.47e-08,114;UBERON:0001017,5.94e-07,81;UBERON:0001049,7.60e-07,56;UBERON:0005068,7.60e-07,56;UBERON:0006241,7.60e-07,56;UBERON:0007135,7.60e-07,56;UBERON:0002780,9.55e-07,41;UBERON:0001890,9.55e-07,41;UBERON:0003080,9.55e-07,41;UBERON:0006240,9.55e-07,41 | |||
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| ||
|short_description=p1@NSUN6 | |short_description=p1@NSUN6 | ||
}} | }} |
Revision as of 20:18, 19 November 2012
Short description: | p1@NSUN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NSUN6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377304, NM_182543, uc010qcp.1_5end |
EntrezGene: | NSUN6 |
HGNC: | 23529 |
UniProt: | Q8TEA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.25e-20 | 168 |
hematopoietic oligopotent progenitor cell | 4.49e-20 | 161 |
hematopoietic multipotent progenitor cell | 4.49e-20 | 161 |
hematopoietic cell | 5.48e-18 | 177 |
leukocyte | 1.59e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 2.34e-14 | 120 |
lymphocyte | 1.71e-13 | 53 |
common lymphoid progenitor | 1.71e-13 | 53 |
lymphoid lineage restricted progenitor cell | 5.54e-13 | 52 |
nongranular leukocyte | 1.61e-12 | 115 |
lymphocyte of B lineage | 1.52e-09 | 24 |
pro-B cell | 1.52e-09 | 24 |
myeloid cell | 2.41e-08 | 108 |
common myeloid progenitor | 2.41e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.47e-08 | 114 |
central nervous system | 5.94e-07 | 81 |
neural tube | 7.60e-07 | 56 |
neural rod | 7.60e-07 | 56 |
future spinal cord | 7.60e-07 | 56 |
neural keel | 7.60e-07 | 56 |
regional part of forebrain | 9.55e-07 | 41 |
forebrain | 9.55e-07 | 41 |
anterior neural tube | 9.55e-07 | 41 |
future forebrain | 9.55e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.02e-08 | 235 |
hematologic cancer | 4.08e-08 | 51 |
immune system cancer | 4.08e-08 | 51 |
disease of cellular proliferation | 2.08e-07 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.