FFCP PHASE1:Hg19::chr5:132083164..132083173,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000791!2.03e-12!18;CL:0000789!2.03e-12!18;CL:0002420!2.03e-12!18;CL:0002419!2.03e-12!18;CL:0000790!2.03e-12!18;CL:0000542!5.66e-12!53;CL:0000051!5.66e-12!53;CL:0000838!1.97e-11!52;CL:0000084!1.42e-10!25;CL:0000827!1.42e-10!25;CL:0000624!4.90e-08!6;CL:0000625!2.23e-07!11 | |ontology_enrichment_celltype=CL:0000791!2.03e-12!18;CL:0000789!2.03e-12!18;CL:0002420!2.03e-12!18;CL:0002419!2.03e-12!18;CL:0000790!2.03e-12!18;CL:0000542!5.66e-12!53;CL:0000051!5.66e-12!53;CL:0000838!1.97e-11!52;CL:0000084!1.42e-10!25;CL:0000827!1.42e-10!25;CL:0000624!4.90e-08!6;CL:0000625!2.23e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000624;4.30e-12;6!CL:0000084;1.11e-11;25!CL:0000791;2.94e-11;18!CL:0000789;2.94e-11;18!CL:0002419;2.94e-11;18!CL:0000623;9.64e-09;3!CL:0000542;1.54e-08;53 | |ontology_enrichment_celltype_v019=CL:0000624;4.30e-12;6!CL:0000084;1.11e-11;25!CL:0000791;2.94e-11;18!CL:0000789;2.94e-11;18!CL:0002419;2.94e-11;18!CL:0000623;9.64e-09;3!CL:0000542;1.54e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.70e-17,52;CL:0000542,9.82e-17,53;CL:0000051,9.82e-17,53;CL:0000624,5.66e-12,6;CL:0000084,1.02e-11,25;CL:0000827,1.02e-11,25;CL:0000791,2.98e-11,18;CL:0000789,2.98e-11,18;CL:0002420,2.98e-11,18;CL:0002419,2.98e-11,18;CL:0000790,2.98e-11,18;CL:0000623,4.85e-09,3;CL:0000825,4.85e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.94e-11;18!UBERON:0006241;3.21e-09;3!UBERON:0003057;3.21e-09;3!CL:0000051;1.54e-08;53 | |ontology_enrichment_development_v019=CL:0000790;2.94e-11;18!UBERON:0006241;3.21e-09;3!UBERON:0003057;3.21e-09;3!CL:0000051;1.54e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;8.86e-07;2 | |ontology_enrichment_disease_v019=DOID:3493;8.86e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,6.01e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.01e-22!115;UBERON:0001049!3.51e-13!57;UBERON:0005068!3.51e-13!57;UBERON:0006241!3.51e-13!57;UBERON:0007135!3.51e-13!57;UBERON:0002780!3.17e-10!41;UBERON:0001890!3.17e-10!41;UBERON:0006240!3.17e-10!41;UBERON:0003080!8.20e-10!42;UBERON:0002616!2.59e-09!59;UBERON:0001893!6.40e-09!34;UBERON:0005743!6.64e-09!86;UBERON:0002020!8.07e-09!34;UBERON:0003528!8.07e-09!34;UBERON:0003075!1.86e-08!86;UBERON:0007284!1.86e-08!86;UBERON:0002791!2.07e-08!33;UBERON:0003056!8.23e-08!61;UBERON:0000073!9.49e-08!94;UBERON:0001016!9.49e-08!94;UBERON:0002346!1.23e-07!90;UBERON:0001869!1.52e-07!32;UBERON:0001017!3.31e-07!82;UBERON:0000955!4.05e-07!69;UBERON:0006238!4.05e-07!69;UBERON:0000153!8.85e-07!129;UBERON:0007811!8.85e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!3.01e-22!115;UBERON:0001049!3.51e-13!57;UBERON:0005068!3.51e-13!57;UBERON:0006241!3.51e-13!57;UBERON:0007135!3.51e-13!57;UBERON:0002780!3.17e-10!41;UBERON:0001890!3.17e-10!41;UBERON:0006240!3.17e-10!41;UBERON:0003080!8.20e-10!42;UBERON:0002616!2.59e-09!59;UBERON:0001893!6.40e-09!34;UBERON:0005743!6.64e-09!86;UBERON:0002020!8.07e-09!34;UBERON:0003528!8.07e-09!34;UBERON:0003075!1.86e-08!86;UBERON:0007284!1.86e-08!86;UBERON:0002791!2.07e-08!33;UBERON:0003056!8.23e-08!61;UBERON:0000073!9.49e-08!94;UBERON:0001016!9.49e-08!94;UBERON:0002346!1.23e-07!90;UBERON:0001869!1.52e-07!32;UBERON:0001017!3.31e-07!82;UBERON:0000955!4.05e-07!69;UBERON:0006238!4.05e-07!69;UBERON:0000153!8.85e-07!129;UBERON:0007811!8.85e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;7.47e-13;22!UBERON:0004921;3.33e-10;33!UBERON:0002240;3.21e-09;3!UBERON:0005174;3.21e-09;3!UBERON:0001137;3.21e-09;3!UBERON:0000160;7.69e-09;17!UBERON:0002370;8.73e-07;2!UBERON:0005058;8.73e-07;2!UBERON:0009113;8.73e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0005409;7.47e-13;22!UBERON:0004921;3.33e-10;33!UBERON:0002240;3.21e-09;3!UBERON:0005174;3.21e-09;3!UBERON:0001137;3.21e-09;3!UBERON:0000160;7.69e-09;17!UBERON:0002370;8.73e-07;2!UBERON:0005058;8.73e-07;2!UBERON:0009113;8.73e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.49e-11,25;UBERON:0002240,3.99e-09,3;UBERON:0005174,3.99e-09,3;UBERON:0001137,3.99e-09,3;UBERON:0000160,6.12e-09,17;UBERON:0003408,3.65e-07,10;UBERON:0007023,4.89e-07,114;UBERON:0002370,5.14e-07,4;UBERON:0005058,5.14e-07,4;UBERON:0009113,5.14e-07,4;UBERON:0003295,5.14e-07,4;UBERON:0005562,5.14e-07,4 | |||
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| ||
|short_description=p1@CCNI2 | |short_description=p1@CCNI2 | ||
}} | }} |
Revision as of 04:40, 20 November 2012
Short description: | p1@CCNI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CCNI2_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000378731, NM_001039780, uc003kxq.1, uc011cxg.1, uc011cxh.1_5end |
EntrezGene: | CCNI2 |
HGNC: | 33869 |
UniProt: | Q6ZMN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.70e-17 | 52 |
lymphocyte | 9.82e-17 | 53 |
common lymphoid progenitor | 9.82e-17 | 53 |
CD4-positive, alpha-beta T cell | 5.66e-12 | 6 |
T cell | 1.02e-11 | 25 |
pro-T cell | 1.02e-11 | 25 |
mature alpha-beta T cell | 2.98e-11 | 18 |
alpha-beta T cell | 2.98e-11 | 18 |
immature T cell | 2.98e-11 | 18 |
mature T cell | 2.98e-11 | 18 |
immature alpha-beta T cell | 2.98e-11 | 18 |
natural killer cell | 4.85e-09 | 3 |
pro-NK cell | 4.85e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.49e-11 | 25 |
spinal cord | 3.99e-09 | 3 |
dorsal region element | 3.99e-09 | 3 |
dorsum | 3.99e-09 | 3 |
intestine | 6.12e-09 | 17 |
gland of gut | 3.65e-07 | 10 |
adult organism | 4.89e-07 | 114 |
thymus | 5.14e-07 | 4 |
hemolymphoid system gland | 5.14e-07 | 4 |
thymic region | 5.14e-07 | 4 |
pharyngeal gland | 5.14e-07 | 4 |
thymus primordium | 5.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.01e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.