FFCP PHASE1:Hg19::chr10:5046042..5046058,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100653286,1646|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=385|TSSclassifier=W|UniProt=B4DK69,B4DKR9|association_with_transcript=0bp_to_ENST00000421196,ENST00000455190_5end|description=CAGE_peak_1_at_AKR1C2_5end|id=chr10:5046042..5046058,-|ontology_enrichment_celltype=CL:0000136!1.16e-10!15;CL:0000223!1.15e-08!59;CL:0002076!7.53e-08!43|ontology_enrichment_celltype_v019=CL:0000136;2.66e-10;13|ontology_enrichment_celltype_v019_2=CL:0000136,2.91e-11,15;CL:0000223,4.82e-08,58;CL:0002076,5.12e-07,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!2.39e-20!365;UBERON:0000481!6.27e-18!347;UBERON:0000477!2.58e-14!286;UBERON:0000468!9.25e-14!659;UBERON:0004111!1.37e-13!241;UBERON:0002100!2.87e-12!216;UBERON:0003104!6.62e-12!238;UBERON:0009142!6.62e-12!238;UBERON:0000483!2.24e-11!309;UBERON:0000119!3.68e-11!312;UBERON:0000467!7.89e-11!625;UBERON:0004119!8.89e-11!169;UBERON:0000925!8.89e-11!169;UBERON:0006595!8.89e-11!169;UBERON:0000480!1.35e-10!626;UBERON:0001004!7.70e-10!72;UBERON:0001007!1.07e-09!155;UBERON:0001555!1.07e-09!155;UBERON:0007026!1.07e-09!155;UBERON:0000025!1.25e-08!194;UBERON:0004921!1.52e-08!129;UBERON:0004185!1.52e-08!129;UBERON:0000486!2.09e-08!82;UBERON:0005256!3.48e-08!143;UBERON:0000922!4.72e-08!612;UBERON:0002050!4.73e-08!605;UBERON:0005423!4.73e-08!605;UBERON:0000923!5.29e-08!604;UBERON:0005291!5.29e-08!604;UBERON:0006598!5.29e-08!604;UBERON:0002532!5.29e-08!604;UBERON:0007023!5.84e-08!115;UBERON:0003102!7.50e-08!95;UBERON:0001013!1.84e-07!14;UBERON:0000914!4.12e-07!83;UBERON:0002329!4.12e-07!83;UBERON:0003077!4.12e-07!83;UBERON:0003059!4.12e-07!83;UBERON:0007282!4.12e-07!83;UBERON:0009618!4.12e-07!83;UBERON:0007285!4.12e-07!83;UBERON:0002385!6.43e-07!63;UBERON:0001015!6.43e-07!63;UBERON:0000383!6.43e-07!63;UBERON:0000077!7.61e-07!130|ontology_enrichment_uberon_v019=UBERON:0001013;7.85e-08;14|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.35e-12,240;UBERON:0004119,8.83e-12,160;UBERON:0000925,8.83e-12,160;UBERON:0006595,8.83e-12,160;UBERON:0002100,1.36e-11,199;UBERON:0000483,4.71e-11,306;UBERON:0001007,6.15e-11,145;UBERON:0001555,6.15e-11,145;UBERON:0007026,6.15e-11,145;UBERON:0001004,1.23e-10,74;UBERON:0000119,1.33e-10,309;UBERON:0004921,7.46e-10,118;UBERON:0011216,1.05e-09,223;UBERON:0007023,9.36e-09,114;UBERON:0000486,1.24e-08,83;UBERON:0005256,1.54e-08,122;UBERON:0003104,1.64e-08,160;UBERON:0009142,1.64e-08,160;UBERON:0003102,2.05e-08,99;UBERON:0001013,7.51e-08,14;UBERON:0000025,7.93e-08,192;UBERON:0001041,1.81e-07,87;UBERON:0000915,3.74e-07,52;UBERON:0002385,6.13e-07,64;UBERON:0001015,6.13e-07,64;UBERON:0000383,6.13e-07,64;UBERON:0000065,9.84e-07,54;UBERON:0007524,9.87e-07,73;UBERON:0009569,9.98e-07,112|phase1_expression=70.6728895362465,732.866093278835,425.259437157545,336.246282466518,737.485805805025,52.3403114460221,896.681568715819,564.757566843587,1276.15297938441,6.88055022204225,4.88460817580699,1.09220686065086,2.63766978228454,112.256082134762,106.709954984389,4.03395087871065,3.61616716814386,2.92124036154949,3.90346239032406,0.123121058076788,0,0,0.572471974262113,0,0,0.0764134057479513,0,0,0,0,0.464448369948228,123.202444080176,46.3857114918505,64.3371977690211,0,0,0,0.553995408531877,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0.929119112685311,0,0.256160706529101,0.236482229888585,0.689491361473237,1.29096936716765,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0.199463657621632,0,3.19230162491442,2.26954089876456,2.4912889959823,0.251248665256743,0,0,1.81619850790011,2.57794345191295,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1329612839546,11.4019146149618,2.81297636055767,24.5778623621505,42.6137224040506,109.0694287775,50.1030146642193,21.8985691636186,0,0,0.614843499851882,15.2590622954835,9.83597278389864,47.460408676407,0.324547393654683,0.696518949197069,0,0,0,0,0.993812036833525,11.1830497363796,0.694281003215189,0,0.419499436209906,0.275118041940067,1.04497483268405,0.258416759169329,0.35576626268671,0,1.20848795132744,12.1643536914962,7.80998584154142,0.735326160691737,0,0.535798369704479,0.44905874525234,1.12611480483322,0,0,0.549605231791222,0,0,90.7075628456471,1.49091585508596,9.75054939817264,9.93068856099141,18.0707071071753,17.7334191099179,5.04609840128076,1.06748995729705,0.74000264525148,47.6152884161642,7.40908696383284,2.61539044981534,8.47601594811616,4.03323147135999,0,2.49728061464256,27.3826474341336,13.0020352080067,4.69737994575059,7.93177427403845,6.88208952841018,6.94124182266637,0,22.9383234210199,0,1.23633464639278,8.19145225744224,1.43723628363248,0.336672227908132,0.625592599359821,3.60183350129438,0,1.5324389789951,5.85928429735728,0.794025282120147,4.12596162084383,5.76604949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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100653286,1646 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=385 | |||
|TSSclassifier=W | |||
|UniProt=B4DK69,B4DKR9 | |||
|association_with_transcript=0bp_to_ENST00000421196,ENST00000455190_5end | |||
|description=CAGE_peak_1_at_AKR1C2_5end | |||
|id=chr10:5046042..5046058,- | |||
|ontology_enrichment_celltype=CL:0000136!1.16e-10!15;CL:0000223!1.15e-08!59;CL:0002076!7.53e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.66e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.91e-11,15;CL:0000223,4.82e-08,58;CL:0002076,5.12e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.39e-20!365;UBERON:0000481!6.27e-18!347;UBERON:0000477!2.58e-14!286;UBERON:0000468!9.25e-14!659;UBERON:0004111!1.37e-13!241;UBERON:0002100!2.87e-12!216;UBERON:0003104!6.62e-12!238;UBERON:0009142!6.62e-12!238;UBERON:0000483!2.24e-11!309;UBERON:0000119!3.68e-11!312;UBERON:0000467!7.89e-11!625;UBERON:0004119!8.89e-11!169;UBERON:0000925!8.89e-11!169;UBERON:0006595!8.89e-11!169;UBERON:0000480!1.35e-10!626;UBERON:0001004!7.70e-10!72;UBERON:0001007!1.07e-09!155;UBERON:0001555!1.07e-09!155;UBERON:0007026!1.07e-09!155;UBERON:0000025!1.25e-08!194;UBERON:0004921!1.52e-08!129;UBERON:0004185!1.52e-08!129;UBERON:0000486!2.09e-08!82;UBERON:0005256!3.48e-08!143;UBERON:0000922!4.72e-08!612;UBERON:0002050!4.73e-08!605;UBERON:0005423!4.73e-08!605;UBERON:0000923!5.29e-08!604;UBERON:0005291!5.29e-08!604;UBERON:0006598!5.29e-08!604;UBERON:0002532!5.29e-08!604;UBERON:0007023!5.84e-08!115;UBERON:0003102!7.50e-08!95;UBERON:0001013!1.84e-07!14;UBERON:0000914!4.12e-07!83;UBERON:0002329!4.12e-07!83;UBERON:0003077!4.12e-07!83;UBERON:0003059!4.12e-07!83;UBERON:0007282!4.12e-07!83;UBERON:0009618!4.12e-07!83;UBERON:0007285!4.12e-07!83;UBERON:0002385!6.43e-07!63;UBERON:0001015!6.43e-07!63;UBERON:0000383!6.43e-07!63;UBERON:0000077!7.61e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;7.85e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.35e-12,240;UBERON:0004119,8.83e-12,160;UBERON:0000925,8.83e-12,160;UBERON:0006595,8.83e-12,160;UBERON:0002100,1.36e-11,199;UBERON:0000483,4.71e-11,306;UBERON:0001007,6.15e-11,145;UBERON:0001555,6.15e-11,145;UBERON:0007026,6.15e-11,145;UBERON:0001004,1.23e-10,74;UBERON:0000119,1.33e-10,309;UBERON:0004921,7.46e-10,118;UBERON:0011216,1.05e-09,223;UBERON:0007023,9.36e-09,114;UBERON:0000486,1.24e-08,83;UBERON:0005256,1.54e-08,122;UBERON:0003104,1.64e-08,160;UBERON:0009142,1.64e-08,160;UBERON:0003102,2.05e-08,99;UBERON:0001013,7.51e-08,14;UBERON:0000025,7.93e-08,192;UBERON:0001041,1.81e-07,87;UBERON:0000915,3.74e-07,52;UBERON:0002385,6.13e-07,64;UBERON:0001015,6.13e-07,64;UBERON:0000383,6.13e-07,64;UBERON:0000065,9.84e-07,54;UBERON:0007524,9.87e-07,73;UBERON:0009569,9.98e-07,112 | |||
|phase1_expression=70.6728895362465,732.866093278835,425.259437157545,336.246282466518,737.485805805025,52.3403114460221,896.681568715819,564.757566843587,1276.15297938441,6.88055022204225,4.88460817580699,1.09220686065086,2.63766978228454,112.256082134762,106.709954984389,4.03395087871065,3.61616716814386,2.92124036154949,3.90346239032406,0.123121058076788,0,0,0.572471974262113,0,0,0.0764134057479513,0,0,0,0,0.464448369948228,123.202444080176,46.3857114918505,64.3371977690211,0,0,0,0.553995408531877,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0.929119112685311,0,0.256160706529101,0.236482229888585,0.689491361473237,1.29096936716765,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0.199463657621632,0,3.19230162491442,2.26954089876456,2.4912889959823,0.251248665256743,0,0,1.81619850790011,2.57794345191295,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1329612839546,11.4019146149618,2.81297636055767,24.5778623621505,42.6137224040506,109.0694287775,50.1030146642193,21.8985691636186,0,0,0.614843499851882,15.2590622954835,9.83597278389864,47.460408676407,0.324547393654683,0.696518949197069,0,0,0,0,0.993812036833525,11.1830497363796,0.694281003215189,0,0.419499436209906,0.275118041940067,1.04497483268405,0.258416759169329,0.35576626268671,0,1.20848795132744,12.1643536914962,7.80998584154142,0.735326160691737,0,0.535798369704479,0.44905874525234,1.12611480483322,0,0,0.549605231791222,0,0,90.7075628456471,1.49091585508596,9.75054939817264,9.93068856099141,18.0707071071753,17.7334191099179,5.04609840128076,1.06748995729705,0.74000264525148,47.6152884161642,7.40908696383284,2.61539044981534,8.47601594811616,4.03323147135999,0,2.49728061464256,27.3826474341336,13.0020352080067,4.69737994575059,7.93177427403845,6.88208952841018,6.94124182266637,0,22.9383234210199,0,1.23633464639278,8.19145225744224,1.43723628363248,0.336672227908132,0.625592599359821,3.60183350129438,0,1.5324389789951,5.85928429735728,0.794025282120147,4.12596162084383,5.76604949810132,2.54318281391474,20.7062856298238,15.973142031958,2.31876486041066,5.02515512095292,41.3502013991102,17.4412239238546,9.34004964703224,11.690337127572,55.6062435456713,1.77504796258307,0.806016785821122,0.339121184620975,69.3806462856236,33.2750267120818,22.0839538449533,0,0,0.69716365721711,7.87824018116815,1.7662459561294,0,0,5.78916844373597,0,3.71494342425583,10.1063127433742,23.3064396078492,23.4332719208561,12.5325735539411,29.117608801352,19.6091499683166,10.2026366217772,26.9662616320329,20.2108109079106,15.0051391209092,0,0,2.8810180793198,0,116.614632036084,739.086066941575,340.88577615517,0,68.6275487070574,0.686271241194102,36.8760958972982,5.62008766288098,16.7883383927424,28.146887328193,0,21.8386304908711,0,0.231860809950154,0.469634776943287,28.7289231044537,3.70388410061289,94.7465678128299,76.6498266020497,84.9901300473924,0,0,0.445893486866185,461.170463214943,6.55130299975552,11.2002326821485,17.1952363589469,16.8567684338098,6.51750554580859,0,0.088048434013226,0.621984346622316,0.288239906833923,0.37872730027914,0.063497894292169,0,0,116.32926329544,0,0,0,0.336393253036082,1.74384027533312,0.51336800074665,0.129271715757778,14.3062578340753,10.988935783228,0.26593811658487,1.04007436911366,0.257207374262142,2.83698264046557,0.266422179016099,1.42977993658148,1.08524321078289,0.823240336780769,15.961073030393,0,3.16780749173372,10.8518175741451,6.10073421020206,2.29937879718731,0,0,0,0,2.29723871668228,1.42636905040718,71.0876215737814,31.2324010276583,4.83464600747718,3.6988097517864,0,0,0,0,2.60279707715243,1.54657762555539,8.04078073604874,3.18969375826582,0,0,0,85.2705867448022,30.5104017846403,17.3609615167831,0.207970861530807,0.178428988797162,0,0.819989904948992,7.22270639346525,4.5481500811197,20.694614258501,0.664225598535437,1.65932251687533,11.3817534953189,1.37060810223918,1.37257369524342,0,0,0,0.909382714338778,0,2.11673205330776,13.1497138143952,14.1185015425017,11.2264037773229,39.9794145677787,39.9131654272029,5.62988724002626,38.5886972756977,14.341501523647,13.3171293984845,24.8024011161704,22.3279404548957,18.7098709320534,267.220243047077,17.0430499757792,37.8452864526534,16.8777238801972,0.364182336013434,3.54035920390445,6.76799419361118,1.38627606787947,0.784349769176855,0,4.22206515571503,0,0,0.215915916102139,0,8.39933956385944,2.50844886927427,0,2.49322802678617,1.34324852833307,0,0.261435451024901,0,0,0.325378394664303,87.6879009122116,0,0,26.4162147478239,19.5018073810956,22.4957501781823,4.06017016826912,35.7392791705975,60.480447842095,23.2943807498857,27.499582686278,36.6892235602998,11.6760479560058,9.61545984984763,82.6424576804891,33.8254518562587,27.6919586113248,188.153472391323,39.047026140972,29.5923606020802,23.6992671854604,6.77673876387395,34.0675859402894,23.488190786027,2.22389062924704,8.58749320451947,0.744316738719335,5.06207079549961,2.09693213316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2134047591577,2.9637093513365,0.22910686854405,27.6083683241245,14.3330840846615,2.46081949955143,0.098150233615243,153.982339252606,19.4228651156368,33.1600866145678,3.4794432940146,10.1999308542419,0.467878926924211,0,0.475680363110274,199.462780880803,0,0,4.86197196080051,2.84127428655144,172.606447764679,16.6700858792656,116.188537721102,8.63757255305759,18.4168768202793,8.8757702792514,1.18948980281472,1.78569444161722,1.74036297528658,0,121.238124313242,0,56.4899221491744,73.0336388246517,3.66983426723633,17.3440895613256,0,3.94350643107305,8.29066311646717,22.2191273016468,61.0071829793472,160.374943135102,123.731196767404,0,0,1.14028650910293,0,0,0,0,11.3668047327359,8.03892390468535,9.12086383404657,10.1364335944657,63.5437266064923,15.9503169080706,0.0645889098360061,1.48979314310059,1.12131862580613,11.8383714397387,14.1482032270753,458.076037575207,14.7160319466671,20.3403200104054,130.749580430849,41.5825445682517,7.24489090637673,0.213454691755431,1.9307228228694,39.2536133205785,9.38563769613817,4.40069199058319,3.25516942652591,51.92902838647,50.7209959849386,0.320568492303233 | |||
|short_description=p1@AKR1C2 | |||
}} |
Revision as of 13:34, 10 September 2013
Short description: | p1@AKR1C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AKR1C2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000421196, ENST00000455190_5end |
EntrezGene: | 100653286,1646 |
HGNC: | 385 |
UniProt: | B4DK69B4DKR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.91e-11 | 15 |
endodermal cell | 4.82e-08 | 58 |
endo-epithelial cell | 5.12e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.35e-12 | 240 |
endoderm-derived structure | 8.83e-12 | 160 |
endoderm | 8.83e-12 | 160 |
presumptive endoderm | 8.83e-12 | 160 |
trunk | 1.36e-11 | 199 |
epithelium | 4.71e-11 | 306 |
digestive system | 6.15e-11 | 145 |
digestive tract | 6.15e-11 | 145 |
primitive gut | 6.15e-11 | 145 |
respiratory system | 1.23e-10 | 74 |
cell layer | 1.33e-10 | 309 |
subdivision of digestive tract | 7.46e-10 | 118 |
organ system subdivision | 1.05e-09 | 223 |
adult organism | 9.36e-09 | 114 |
multilaminar epithelium | 1.24e-08 | 83 |
trunk mesenchyme | 1.54e-08 | 122 |
mesenchyme | 1.64e-08 | 160 |
entire embryonic mesenchyme | 1.64e-08 | 160 |
surface structure | 2.05e-08 | 99 |
adipose tissue | 7.51e-08 | 14 |
tube | 7.93e-08 | 192 |
foregut | 1.81e-07 | 87 |
thoracic segment of trunk | 3.74e-07 | 52 |
muscle tissue | 6.13e-07 | 64 |
musculature | 6.13e-07 | 64 |
musculature of body | 6.13e-07 | 64 |
respiratory tract | 9.84e-07 | 54 |
dense mesenchyme tissue | 9.87e-07 | 73 |
subdivision of trunk | 9.98e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.