FFCP PHASE1:Hg19::chr10:72141310..72141325,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55222|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23421|TSSclassifier=S|UniProt=Q8TCA0|association_with_transcript=88bp_to_ENST00000395010,ENST00000395011,NM_207119,uc001jqx.1_5end|coexpression_cluster_id=C72|description=CAGE_peak_5_at_LRRC20_5end|id=chr10:72141310..72141325,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004874;1.67e-23;1!UBERON:0008801;5.73e-23;1!UBERON:0008814;2.90e-12;2!UBERON:0010056;2.90e-12;2|ontology_enrichment_disease=DOID:114!6.29e-16!2;DOID:178!1.05e-08!1;DOID:326!1.05e-08!1;DOID:3978!1.05e-08!1;DOID:3394!1.05e-08!1;DOID:5844!1.05e-08!1;DOID:6193!1.91e-08!1;DOID:1287!2.07e-08!4|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.15e-20!115;UBERON:0001630!1.37e-16!2;UBERON:0005090!1.37e-16!2;UBERON:0001829!4.65e-16!2;UBERON:0001723!3.11e-11!3;UBERON:0001033!3.11e-11!3;UBERON:0010056!3.11e-11!3;UBERON:0003135!4.88e-11!11;UBERON:0000078!2.12e-10!18;UBERON:0005418!3.31e-09!1;UBERON:0001389!3.31e-09!1;UBERON:0000026!3.31e-09!1;UBERON:0008784!3.31e-09!1;UBERON:0006058!3.31e-09!1;UBERON:0003663!3.31e-09!1;UBERON:0001383!3.31e-09!1;UBERON:0004256!3.31e-09!1;UBERON:0002529!3.31e-09!1;UBERON:0004708!3.31e-09!1;UBERON:0002101!3.31e-09!1;UBERON:0004709!3.31e-09!1;UBERON:0003661!3.31e-09!1;UBERON:0002471!3.31e-09!1;UBERON:0004357!3.31e-09!1;UBERON:0009872!3.31e-09!1;UBERON:0004347!3.31e-09!1;UBERON:0005420!3.31e-09!1;UBERON:0005732!3.31e-09!1;UBERON:0006057!3.31e-09!1;UBERON:0000978!3.31e-09!1;UBERON:0002103!3.31e-09!1;UBERON:0001665!3.31e-09!1;UBERON:0003823!3.31e-09!1;UBERON:0000154!3.31e-09!1;UBERON:0005733!3.31e-09!1;UBERON:0005730!3.31e-09!1;UBERON:0000989!3.58e-09!1;UBERON:0008811!3.58e-09!1;UBERON:0006258!3.58e-09!1;UBERON:0005876!3.58e-09!1;UBERON:0004874!3.58e-09!1;UBERON:0002426!4.19e-09!1;UBERON:0003831!4.19e-09!1;UBERON:0003898!4.19e-09!1;UBERON:0004830!4.19e-09!1;UBERON:0001774!4.19e-09!1;UBERON:0003830!4.19e-09!1;UBERON:0005175!4.19e-09!1;UBERON:0003897!4.19e-09!1;UBERON:0001103!4.19e-09!1;UBERON:0010084!4.19e-09!1;UBERON:0003103!4.53e-09!69;UBERON:0001831!5.70e-09!1;UBERON:0001567!5.70e-09!1;UBERON:0008801!5.70e-09!1;UBERON:0002372!6.65e-09!1;UBERON:0001961!6.65e-09!1;UBERON:0001744!6.65e-09!1;UBERON:0001735!6.65e-09!1;UBERON:0000166!6.94e-09!21;UBERON:0001736!8.36e-09!1;UBERON:0006298!8.36e-09!1;UBERON:0002146!9.02e-09!1;UBERON:0005623!9.02e-09!1;UBERON:0001301!1.78e-08!1;UBERON:0001042!2.03e-07!10;UBERON:0009145!2.03e-07!10;UBERON:0006562!8.79e-07!11|ontology_enrichment_uberon_v019=UBERON:0005090;5.59e-45;2!UBERON:0001630;5.59e-45;2!UBERON:0001723;4.49e-30;3!UBERON:0001033;4.49e-30;3!UBERON:0001389;1.34e-23;1!UBERON:0000026;1.34e-23;1!UBERON:0008784;1.34e-23;1!UBERON:0006058;1.34e-23;1!UBERON:0003663;1.34e-23;1!UBERON:0004256;1.34e-23;1!UBERON:0004708;1.34e-23;1!UBERON:0002101;1.34e-23;1!UBERON:0004709;1.34e-23;1!UBERON:0002529;1.34e-23;1!UBERON:0010538;1.34e-23;1!UBERON:0003661;1.34e-23;1!UBERON:0010890;1.34e-23;1!UBERON:0002471;1.34e-23;1!UBERON:0001383;1.34e-23;1!UBERON:0010758;1.34e-23;1!UBERON:0010707;1.34e-23;1!UBERON:0000978;1.34e-23;1!UBERON:0002103;1.34e-23;1!UBERON:0001665;1.34e-23;1!UBERON:0003823;1.34e-23;1!UBERON:0000154;1.34e-23;1!UBERON:0010709;1.34e-23;1!UBERON:0000989;1.67e-23;1!UBERON:0008811;1.67e-23;1!UBERON:0002426;2.93e-23;1!UBERON:0003831;2.93e-23;1!UBERON:0003898;2.93e-23;1!UBERON:0004830;2.93e-23;1!UBERON:0003830;2.93e-23;1!UBERON:0005175;2.93e-23;1!UBERON:0001774;2.93e-23;1!UBERON:0001103;2.93e-23;1!UBERON:0001831;5.73e-23;1!UBERON:0001567;5.73e-23;1!UBERON:0001134;3.43e-13;16!UBERON:0002036;3.43e-13;16!UBERON:0000341;2.07e-12;2!UBERON:0003127;3.43e-12;2!UBERON:0001829;3.43e-12;2!UBERON:0004089;3.43e-12;2!UBERON:0000165;1.11e-07;28!UBERON:0002385;2.52e-07;31!UBERON:0001015;2.52e-07;31!UBERON:0000383;2.52e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0005090,5.00e-45,2;UBERON:0001630,5.00e-45,2;UBERON:0001723,4.84e-30,3;UBERON:0001033,4.84e-30,3;UBERON:0010056,4.84e-30,3;UBERON:0005418,1.34e-23,1;UBERON:0001389,1.34e-23,1;UBERON:0000026,1.34e-23,1;UBERON:0008784,1.34e-23,1;UBERON:0006058,1.34e-23,1;UBERON:0003663,1.34e-23,1;UBERON:0004256,1.34e-23,1;UBERON:0004708,1.34e-23,1;UBERON:0002101,1.34e-23,1;UBERON:0004709,1.34e-23,1;UBERON:0002529,1.34e-23,1;UBERON:0010538,1.34e-23,1;UBERON:0003661,1.34e-23,1;UBERON:0010890,1.34e-23,1;UBERON:0002471,1.34e-23,1;UBERON:0001383,1.34e-23,1;UBERON:0004357,1.34e-23,1;UBERON:0004347,1.34e-23,1;UBERON:0005420,1.34e-23,1;UBERON:0005732,1.34e-23,1;UBERON:0010758,1.34e-23,1;UBERON:0010707,1.34e-23,1;UBERON:0000978,1.34e-23,1;UBERON:0002103,1.34e-23,1;UBERON:0001665,1.34e-23,1;UBERON:0003823,1.34e-23,1;UBERON:0000154,1.34e-23,1;UBERON:0010709,1.34e-23,1;UBERON:0005733,1.34e-23,1;UBERON:0005730,1.34e-23,1;UBERON:0000989,1.67e-23,1;UBERON:0008811,1.67e-23,1;UBERON:0006258,1.67e-23,1;UBERON: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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55222 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23421 | |||
|TSSclassifier=S | |||
|UniProt=Q8TCA0 | |||
|association_with_transcript=88bp_to_ENST00000395010,ENST00000395011,NM_207119,uc001jqx.1_5end | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_5_at_LRRC20_5end | |||
|id=chr10:72141310..72141325,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.67e-23;1!UBERON:0008801;5.73e-23;1!UBERON:0008814;2.90e-12;2!UBERON:0010056;2.90e-12;2 | |||
|ontology_enrichment_disease=DOID:114!6.29e-16!2;DOID:178!1.05e-08!1;DOID:326!1.05e-08!1;DOID:3978!1.05e-08!1;DOID:3394!1.05e-08!1;DOID:5844!1.05e-08!1;DOID:6193!1.91e-08!1;DOID:1287!2.07e-08!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@LRRC20 | |||
}} |
Revision as of 14:10, 10 September 2013
Short description: | p5@LRRC20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LRRC20_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 88bp_to_ENST00000395010, ENST00000395011, NM_207119, uc001jqx.1_5end |
EntrezGene: | LRRC20 |
HGNC: | 23421 |
UniProt: | Q8TCA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.