FFCP PHASE1:Hg19::chr11:18211346..18211354,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2116|description=CAGE_peak_at_chr11:18211346..18211354,+|id=chr11:18211346..18211354,+|ontology_enrichment_celltype=CL:0002057!1.34e-24!42;CL:0000860!8.18e-22!45;CL:0000839!3.19e-15!70;CL:0000557!6.55e-15!71;CL:0000766!9.98e-15!76;CL:0002009!1.44e-14!65;CL:0002194!1.68e-14!63;CL:0000576!1.68e-14!63;CL:0000040!1.68e-14!63;CL:0000559!1.68e-14!63;CL:0000738!5.04e-12!140;CL:0002031!9.34e-12!124;CL:0002087!3.04e-10!119;CL:0000763!3.54e-09!112;CL:0000049!3.54e-09!112;CL:0000037!1.39e-08!172;CL:0000566!1.39e-08!172;CL:0000988!2.85e-08!182;CL:0002032!3.91e-08!165;CL:0000837!3.91e-08!165|ontology_enrichment_celltype_v019=CL:0000860;1.04e-41;33!CL:0002057;1.04e-41;33!CL:0000473;1.22e-33;39!CL:0000234;1.22e-33;39!CL:0000576;4.25e-28;48!CL:0000766;5.35e-17;69!CL:0000197;2.79e-09;6!CL:0000098;2.79e-09;6!CL:0002167;2.79e-09;6!CL:0000763;3.60e-08;100!CL:0002087;9.91e-07;104|ontology_enrichment_celltype_v019_2=CL:0000860,8.69e-50,42;CL:0002057,8.69e-50,42;CL:0000473,1.15e-48,48;CL:0000234,1.15e-48,48;CL:0002009,2.20e-37,61;CL:0002194,9.13e-37,59;CL:0000576,9.13e-37,59;CL:0000040,9.13e-37,59;CL:0000559,9.13e-37,59;CL:0000557,4.04e-33,67;CL:0000766,2.63e-32,72;CL:0000839,8.22e-32,66;CL:0000763,3.03e-19,108;CL:0000049,3.03e-19,108;CL:0002087,3.02e-16,115;CL:0002031,3.57e-16,120;CL:0000738,4.35e-15,136;CL:0002032,3.87e-11,161;CL:0000837,3.87e-11,161;CL:0000037,2.93e-10,168;CL:0000197,2.22e-09,6;CL:0000098,2.22e-09,6;CL:0002167,2.22e-09,6;CL:0000988,3.06e-09,177;CL:0000048,3.34e-07,427;CL:0000723,6.85e-07,433|ontology_enrichment_development_v019=CL:0002057;1.96e-36;42!CL:0000049;1.05e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.65e-13!80;UBERON:0001474!6.25e-12!86;UBERON:0004765!5.63e-10!101;UBERON:0001434!5.63e-10!101;UBERON:0002390!2.89e-09!102;UBERON:0003061!2.89e-09!102;UBERON:0002193!9.08e-09!112;UBERON:0002405!4.48e-08!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.47e-28,76;UBERON:0001474,3.40e-25,82;UBERON:0004765,3.89e-25,90;UBERON:0002405,2.99e-24,93;UBERON:0001434,1.47e-21,100;UBERON:0002390,1.93e-19,98;UBERON:0003061,1.93e-19,98;UBERON:0002193,2.08e-19,108;UBERON:0002204,4.94e-16,167;UBERON:0003081,5.02e-09,203|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,1.0007329835313,0,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,8.74022690387308,6.62963980826375,9.49403117503585,3.90346239032406,0,0,0,0.286235987131057,0,0,0,0,0,0,0.767658796194425,1.23852898652861,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0.257575567634187,2.4717700592526,3.02300754951048,1.4555043671269,3.71886459049095,1.23350366406548,1.85823822537062,4.02769349251011,1.5369642391746,0.945928919554341,3.7922024881028,3.87290810150296,0,5.27078550719293,3.27487380069415,2.47195832889593,3.97909060082173,1.92557416245656,1.27867425159808,2.63881040149373,2.79249120670285,2.13112375266347,1.7412554317715,0.56738522469114,0,3.51748131359441,2.60741459210101,1.08594422352558,1.81619850790011,1.10483290796269,1.58231193720442,2.11255286311942,1.4882300997553,1.46761051855863,1.12328631146495,4.05477610672067,0.964353520182481,0.855038231223746,1.19350006319454,3.47061892152804,0,0.546138611262131,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0.205601498999509,0.668745981562712,0.32592226663359,0.473447805734733,0,0.891283655081389,2.06224135232386,1.10766947291811,0,0.640456598628376,0.390178042679635,0.657751618414705,0.276350017785848,0.869409257205157,0.593146252648242,0,1.04535523804977,1.0197840842781,0.766440987203842,0.34362744548263,0,0.637130828648193,0.651083453856419,0,1.05402583354441,0.511946444617674,0,0.236777252044017,0.821127996921047,0,0.267440195783507,0.144824403882799,0,0,3.19656404608826,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0.571994910780128,0.74291500265913,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0.496971951695318,0.506522046658319,0.794455084879313,0,0,0,0,0,0,0.404132016209064,0,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,1.0126579934476,0.0974370051611986,0,0,1.93975268182574,0,0,0,0,0.272746120590835,0,0,0,0,0,0.504641701751257,0.36497735907583,0,1.28648187638577,0,0,0,0.946454400318751,0.674338760312407,1.20505514941741,1.10293972732394,0.871517776369625,0.949082476444386,1.07865046528132,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,3.08822058537346,0.219500570817251,0,0.201057944823262,0.277765335475589,0,0,0,1.62302566965108,0.939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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2116 | |||
|description=CAGE_peak_at_chr11:18211346..18211354,+ | |||
|id=chr11:18211346..18211354,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.34e-24!42;CL:0000860!8.18e-22!45;CL:0000839!3.19e-15!70;CL:0000557!6.55e-15!71;CL:0000766!9.98e-15!76;CL:0002009!1.44e-14!65;CL:0002194!1.68e-14!63;CL:0000576!1.68e-14!63;CL:0000040!1.68e-14!63;CL:0000559!1.68e-14!63;CL:0000738!5.04e-12!140;CL:0002031!9.34e-12!124;CL:0002087!3.04e-10!119;CL:0000763!3.54e-09!112;CL:0000049!3.54e-09!112;CL:0000037!1.39e-08!172;CL:0000566!1.39e-08!172;CL:0000988!2.85e-08!182;CL:0002032!3.91e-08!165;CL:0000837!3.91e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-41;33!CL:0002057;1.04e-41;33!CL:0000473;1.22e-33;39!CL:0000234;1.22e-33;39!CL:0000576;4.25e-28;48!CL:0000766;5.35e-17;69!CL:0000197;2.79e-09;6!CL:0000098;2.79e-09;6!CL:0002167;2.79e-09;6!CL:0000763;3.60e-08;100!CL:0002087;9.91e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.69e-50,42;CL:0002057,8.69e-50,42;CL:0000473,1.15e-48,48;CL:0000234,1.15e-48,48;CL:0002009,2.20e-37,61;CL:0002194,9.13e-37,59;CL:0000576,9.13e-37,59;CL:0000040,9.13e-37,59;CL:0000559,9.13e-37,59;CL:0000557,4.04e-33,67;CL:0000766,2.63e-32,72;CL:0000839,8.22e-32,66;CL:0000763,3.03e-19,108;CL:0000049,3.03e-19,108;CL:0002087,3.02e-16,115;CL:0002031,3.57e-16,120;CL:0000738,4.35e-15,136;CL:0002032,3.87e-11,161;CL:0000837,3.87e-11,161;CL:0000037,2.93e-10,168;CL:0000197,2.22e-09,6;CL:0000098,2.22e-09,6;CL:0002167,2.22e-09,6;CL:0000988,3.06e-09,177;CL:0000048,3.34e-07,427;CL:0000723,6.85e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-36;42!CL:0000049;1.05e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.65e-13!80;UBERON:0001474!6.25e-12!86;UBERON:0004765!5.63e-10!101;UBERON:0001434!5.63e-10!101;UBERON:0002390!2.89e-09!102;UBERON:0003061!2.89e-09!102;UBERON:0002193!9.08e-09!112;UBERON:0002405!4.48e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.47e-28,76;UBERON:0001474,3.40e-25,82;UBERON:0004765,3.89e-25,90;UBERON:0002405,2.99e-24,93;UBERON:0001434,1.47e-21,100;UBERON:0002390,1.93e-19,98;UBERON:0003061,1.93e-19,98;UBERON:0002193,2.08e-19,108;UBERON:0002204,4.94e-16,167;UBERON:0003081,5.02e-09,203 | |||
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| |||
|short_description=p@chr11:18211346..18211354,+ | |||
}} |
Revision as of 16:59, 10 September 2013
Short description: | p@chr11:18211346..18211354, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:18211346..18211354, + |
Coexpression cluster: | C2116_Aortic_Mallassezderived_mesenchymal_Lymphatic_Melanocyte_CD14CD16_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.69e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.69e-50 | 42 |
defensive cell | 1.15e-48 | 48 |
phagocyte | 1.15e-48 | 48 |
macrophage dendritic cell progenitor | 2.20e-37 | 61 |
monopoietic cell | 9.13e-37 | 59 |
monocyte | 9.13e-37 | 59 |
monoblast | 9.13e-37 | 59 |
promonocyte | 9.13e-37 | 59 |
granulocyte monocyte progenitor cell | 4.04e-33 | 67 |
myeloid leukocyte | 2.63e-32 | 72 |
myeloid lineage restricted progenitor cell | 8.22e-32 | 66 |
myeloid cell | 3.03e-19 | 108 |
common myeloid progenitor | 3.03e-19 | 108 |
nongranular leukocyte | 3.02e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 3.57e-16 | 120 |
leukocyte | 4.35e-15 | 136 |
hematopoietic oligopotent progenitor cell | 3.87e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.87e-11 | 161 |
hematopoietic stem cell | 2.93e-10 | 168 |
receptor cell | 2.22e-09 | 6 |
sensory epithelial cell | 2.22e-09 | 6 |
olfactory epithelial cell | 2.22e-09 | 6 |
hematopoietic cell | 3.06e-09 | 177 |
multi fate stem cell | 3.34e-07 | 427 |
somatic stem cell | 6.85e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.47e-28 | 76 |
bone element | 3.40e-25 | 82 |
skeletal element | 3.89e-25 | 90 |
immune system | 2.99e-24 | 93 |
skeletal system | 1.47e-21 | 100 |
hematopoietic system | 1.93e-19 | 98 |
blood island | 1.93e-19 | 98 |
hemolymphoid system | 2.08e-19 | 108 |
musculoskeletal system | 4.94e-16 | 167 |
lateral plate mesoderm | 5.02e-09 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.