FFCP PHASE1:Hg19::chr11:47378179..47378192,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C13|description=CAGE_peak_at_chr11:47378179..47378192,+|id=chr11:47378179..47378192,+|ontology_enrichment_celltype=CL:0002057!2.51e-49!42;CL:0000860!2.38e-45!45;CL:0000763!2.40e-39!112;CL:0000049!2.40e-39!112;CL:0000037!3.49e-33!172;CL:0000566!3.49e-33!172;CL:0002194!5.35e-33!63;CL:0000576!5.35e-33!63;CL:0000040!5.35e-33!63;CL:0000559!5.35e-33!63;CL:0000766!1.10e-31!76;CL:0002009!1.12e-31!65;CL:0000988!1.15e-31!182;CL:0002032!9.17e-31!165;CL:0000837!9.17e-31!165;CL:0000839!1.05e-28!70;CL:0000557!3.67e-28!71;CL:0002087!6.55e-25!119;CL:0000738!1.66e-24!140;CL:0002031!2.30e-19!124;CL:0002393!1.51e-08!9;CL:0002397!1.51e-08!9;CL:0000775!2.53e-08!3;CL:0000842!7.48e-08!3;CL:0000134!8.68e-08!358;CL:0002320!2.28e-07!365|ontology_enrichment_celltype_v019=CL:0000860;1.58e-58;33!CL:0002057;1.58e-58;33!CL:0000473;4.79e-42;39!CL:0000234;4.79e-42;39!CL:0000576;7.62e-35;48!CL:0000766;2.96e-27;69!CL:0000775;2.30e-21;3!CL:0000763;6.81e-12;100!CL:0000738;4.07e-10;136!CL:0000226;5.47e-10;3!CL:0000842;5.47e-10;3!CL:0002087;1.93e-08;104!CL:0000094;2.49e-08;8!CL:0000785;6.18e-08;1!CL:0000819;6.18e-08;1|ontology_enrichment_celltype_v019_2=CL:0000860,7.25e-60,42;CL:0002057,7.25e-60,42;CL:0000473,6.63e-52,48;CL:0000234,6.63e-52,48;CL:0000766,2.31e-44,72;CL:0002194,9.40e-41,59;CL:0000576,9.40e-41,59;CL:0000040,9.40e-41,59;CL:0000559,9.40e-41,59;CL:0002009,2.59e-39,61;CL:0000839,4.33e-36,66;CL:0000557,1.68e-35,67;CL:0000763,4.31e-31,108;CL:0000049,4.31e-31,108;CL:0000738,1.78e-28,136;CL:0002087,3.65e-26,115;CL:0000037,2.95e-24,168;CL:0000988,8.67e-23,177;CL:0002032,2.39e-21,161;CL:0000837,2.39e-21,161;CL:0000775,3.15e-21,3;CL:0002031,2.63e-20,120;CL:0000226,6.87e-10,3;CL:0000842,6.87e-10,3;CL:0000134,5.71e-09,354;CL:0002320,1.07e-08,361;CL:0000094,2.79e-08,8;CL:0000819,8.12e-08,1;CL:0000219,9.64e-08,386|ontology_enrichment_development_v019=CL:0002057;3.27e-48;42!CL:0000049;1.18e-11;108|ontology_enrichment_disease=DOID:8692!9.19e-09!31;DOID:1240!1.93e-07!39;DOID:2531!8.42e-07!51;DOID:0060083!8.42e-07!51|ontology_enrichment_disease_v019=DOID:0060073;6.18e-08;1!DOID:8675;6.18e-08;1|ontology_enrichment_disease_v019_2=DOID:0060073,8.12e-08,1;DOID:8675,8.12e-08,1|ontology_enrichment_uberon=UBERON:0002390!3.43e-31!102;UBERON:0003061!3.43e-31!102;UBERON:0002193!7.01e-29!112;UBERON:0002371!6.99e-24!80;UBERON:0001474!1.56e-21!86;UBERON:0004765!4.44e-18!101;UBERON:0001434!4.44e-18!101;UBERON:0002405!4.48e-18!115;UBERON:0003081!4.24e-09!216;UBERON:0000178!2.05e-08!15;UBERON:0000179!2.05e-08!15;UBERON:0000463!2.05e-08!15;UBERON:0002204!2.47e-07!167;UBERON:0002384!8.36e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;2.67e-07;15!UBERON:0000179;2.67e-07;15!UBERON:0000463;2.67e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.96e-34,98;UBERON:0003061,1.96e-34,98;UBERON:0002371,6.75e-31,76;UBERON:0002193,7.22e-31,108;UBERON:0001474,2.22e-28,82;UBERON:0004765,1.53e-25,90;UBERON:0002405,1.34e-24,93;UBERON:0001434,1.27e-22,100;UBERON:0003081,2.19e-14,203;UBERON:0002204,5.05e-12,167;UBERON:0002384,2.50e-08,371;UBERON:0000926,1.19e-07,315;UBERON:0004120,1.19e-07,315;UBERON:0006603,1.19e-07,315;UBERON:0000178,3.16e-07,15;UBERON:0000179,3.16e-07,15;UBERON:0000463,3.16e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246301768349837,0,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,11.0299446108578,4.99125002646459,0,0,0,1.30858414901608,2.26725566213286,1.69808842831471,1.85943229524548,1.23350366406548,1.54853185447552,0.575384784644301,0.768482119587302,0,2.06847408441971,0,1.35426486594342,1.88242339542605,1.63743690034707,0,0.612167784741805,0,1.27867425159808,0.989553900560148,1.59570926097305,1.70489900213078,4.06292934080018,1.13477044938228,0.622822248995575,1.00499466102697,1.5644487552606,0,3.02699751316684,0.736555271975129,0,0.211255286311942,0,0,0.22465726229299,0,0.32145117339416,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0.254094624222463,0,0,0,0,3.74503511973591,29.9161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.5885704098234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr11:47378179..47378192,+ | |||
|id=chr11:47378179..47378192,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.51e-49!42;CL:0000860!2.38e-45!45;CL:0000763!2.40e-39!112;CL:0000049!2.40e-39!112;CL:0000037!3.49e-33!172;CL:0000566!3.49e-33!172;CL:0002194!5.35e-33!63;CL:0000576!5.35e-33!63;CL:0000040!5.35e-33!63;CL:0000559!5.35e-33!63;CL:0000766!1.10e-31!76;CL:0002009!1.12e-31!65;CL:0000988!1.15e-31!182;CL:0002032!9.17e-31!165;CL:0000837!9.17e-31!165;CL:0000839!1.05e-28!70;CL:0000557!3.67e-28!71;CL:0002087!6.55e-25!119;CL:0000738!1.66e-24!140;CL:0002031!2.30e-19!124;CL:0002393!1.51e-08!9;CL:0002397!1.51e-08!9;CL:0000775!2.53e-08!3;CL:0000842!7.48e-08!3;CL:0000134!8.68e-08!358;CL:0002320!2.28e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.58e-58;33!CL:0002057;1.58e-58;33!CL:0000473;4.79e-42;39!CL:0000234;4.79e-42;39!CL:0000576;7.62e-35;48!CL:0000766;2.96e-27;69!CL:0000775;2.30e-21;3!CL:0000763;6.81e-12;100!CL:0000738;4.07e-10;136!CL:0000226;5.47e-10;3!CL:0000842;5.47e-10;3!CL:0002087;1.93e-08;104!CL:0000094;2.49e-08;8!CL:0000785;6.18e-08;1!CL:0000819;6.18e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.25e-60,42;CL:0002057,7.25e-60,42;CL:0000473,6.63e-52,48;CL:0000234,6.63e-52,48;CL:0000766,2.31e-44,72;CL:0002194,9.40e-41,59;CL:0000576,9.40e-41,59;CL:0000040,9.40e-41,59;CL:0000559,9.40e-41,59;CL:0002009,2.59e-39,61;CL:0000839,4.33e-36,66;CL:0000557,1.68e-35,67;CL:0000763,4.31e-31,108;CL:0000049,4.31e-31,108;CL:0000738,1.78e-28,136;CL:0002087,3.65e-26,115;CL:0000037,2.95e-24,168;CL:0000988,8.67e-23,177;CL:0002032,2.39e-21,161;CL:0000837,2.39e-21,161;CL:0000775,3.15e-21,3;CL:0002031,2.63e-20,120;CL:0000226,6.87e-10,3;CL:0000842,6.87e-10,3;CL:0000134,5.71e-09,354;CL:0002320,1.07e-08,361;CL:0000094,2.79e-08,8;CL:0000819,8.12e-08,1;CL:0000219,9.64e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.27e-48;42!CL:0000049;1.18e-11;108 | |||
|ontology_enrichment_disease=DOID:8692!9.19e-09!31;DOID:1240!1.93e-07!39;DOID:2531!8.42e-07!51;DOID:0060083!8.42e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060073;6.18e-08;1!DOID:8675;6.18e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,8.12e-08,1;DOID:8675,8.12e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.43e-31!102;UBERON:0003061!3.43e-31!102;UBERON:0002193!7.01e-29!112;UBERON:0002371!6.99e-24!80;UBERON:0001474!1.56e-21!86;UBERON:0004765!4.44e-18!101;UBERON:0001434!4.44e-18!101;UBERON:0002405!4.48e-18!115;UBERON:0003081!4.24e-09!216;UBERON:0000178!2.05e-08!15;UBERON:0000179!2.05e-08!15;UBERON:0000463!2.05e-08!15;UBERON:0002204!2.47e-07!167;UBERON:0002384!8.36e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.67e-07;15!UBERON:0000179;2.67e-07;15!UBERON:0000463;2.67e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.96e-34,98;UBERON:0003061,1.96e-34,98;UBERON:0002371,6.75e-31,76;UBERON:0002193,7.22e-31,108;UBERON:0001474,2.22e-28,82;UBERON:0004765,1.53e-25,90;UBERON:0002405,1.34e-24,93;UBERON:0001434,1.27e-22,100;UBERON:0003081,2.19e-14,203;UBERON:0002204,5.05e-12,167;UBERON:0002384,2.50e-08,371;UBERON:0000926,1.19e-07,315;UBERON:0004120,1.19e-07,315;UBERON:0006603,1.19e-07,315;UBERON:0000178,3.16e-07,15;UBERON:0000179,3.16e-07,15;UBERON:0000463,3.16e-07,15 | |||
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|short_description=p@chr11:47378179..47378192,+ | |||
}} |
Revision as of 17:58, 10 September 2013
Short description: | p@chr11:47378179..47378192, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:47378179..47378192, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.25e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.25e-60 | 42 |
defensive cell | 6.63e-52 | 48 |
phagocyte | 6.63e-52 | 48 |
myeloid leukocyte | 2.31e-44 | 72 |
monopoietic cell | 9.40e-41 | 59 |
monocyte | 9.40e-41 | 59 |
monoblast | 9.40e-41 | 59 |
promonocyte | 9.40e-41 | 59 |
macrophage dendritic cell progenitor | 2.59e-39 | 61 |
myeloid lineage restricted progenitor cell | 4.33e-36 | 66 |
granulocyte monocyte progenitor cell | 1.68e-35 | 67 |
myeloid cell | 4.31e-31 | 108 |
common myeloid progenitor | 4.31e-31 | 108 |
leukocyte | 1.78e-28 | 136 |
nongranular leukocyte | 3.65e-26 | 115 |
hematopoietic stem cell | 2.95e-24 | 168 |
hematopoietic cell | 8.67e-23 | 177 |
hematopoietic oligopotent progenitor cell | 2.39e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.39e-21 | 161 |
neutrophil | 3.15e-21 | 3 |
hematopoietic lineage restricted progenitor cell | 2.63e-20 | 120 |
single nucleate cell | 6.87e-10 | 3 |
mononuclear cell | 6.87e-10 | 3 |
mesenchymal cell | 5.71e-09 | 354 |
connective tissue cell | 1.07e-08 | 361 |
granulocyte | 2.79e-08 | 8 |
B-1 B cell | 8.12e-08 | 1 |
motile cell | 9.64e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.96e-34 | 98 |
blood island | 1.96e-34 | 98 |
bone marrow | 6.75e-31 | 76 |
hemolymphoid system | 7.22e-31 | 108 |
bone element | 2.22e-28 | 82 |
skeletal element | 1.53e-25 | 90 |
immune system | 1.34e-24 | 93 |
skeletal system | 1.27e-22 | 100 |
lateral plate mesoderm | 2.19e-14 | 203 |
musculoskeletal system | 5.05e-12 | 167 |
connective tissue | 2.50e-08 | 371 |
mesoderm | 1.19e-07 | 315 |
mesoderm-derived structure | 1.19e-07 | 315 |
presumptive mesoderm | 1.19e-07 | 315 |
blood | 3.16e-07 | 15 |
haemolymphatic fluid | 3.16e-07 | 15 |
organism substance | 3.16e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 8.12e-08 | 1 |
lymphosarcoma | 8.12e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.