FFCP PHASE1:Hg19::chr12:100535504..100535511,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C17|description=CAGE_peak_at_chr12:100535504..100535511,-|id=chr12:100535504..100535511,-|ontology_enrichment_celltype=CL:0002057!7.05e-42!42;CL:0000860!9.73e-39!45;CL:0000557!1.57e-35!71;CL:0000839!3.34e-33!70;CL:0000766!5.58e-33!76;CL:0002009!4.48e-30!65;CL:0002194!2.29e-28!63;CL:0000576!2.29e-28!63;CL:0000040!2.29e-28!63;CL:0000559!2.29e-28!63;CL:0000763!4.05e-26!112;CL:0000049!4.05e-26!112;CL:0002031!2.06e-19!124;CL:0000738!4.57e-18!140;CL:0002032!6.24e-17!165;CL:0000837!6.24e-17!165;CL:0000037!5.79e-16!172;CL:0000566!5.79e-16!172;CL:0000988!6.11e-16!182;CL:0002087!5.09e-14!119;CL:0000134!2.21e-09!358;CL:0002320!4.81e-09!365;CL:0002274!1.38e-08!5;CL:0000457!1.38e-08!5;CL:0002191!1.38e-08!5;CL:0000097!1.38e-08!5;CL:0000831!1.38e-08!5;CL:0002028!1.38e-08!5;CL:0000219!1.49e-08!390;CL:0000048!1.86e-08!430;CL:0000723!3.21e-08!436;CL:0000034!6.49e-08!444|ontology_enrichment_celltype_v019=CL:0000860;2.38e-14;33!CL:0002057;2.38e-14;33!CL:0000775;2.07e-12;3!CL:0000473;2.60e-10;39!CL:0000234;2.60e-10;39!CL:0000766;5.44e-09;69!CL:0000576;1.64e-08;48!CL:0000097;5.35e-08;5|ontology_enrichment_celltype_v019_2=CL:0000766,1.10e-16,72;CL:0000860,4.27e-13,42;CL:0002057,4.27e-13,42;CL:0000839,9.20e-13,66;CL:0000557,1.39e-12,67;CL:0000775,2.07e-12,3;CL:0000473,1.56e-11,48;CL:0000234,1.56e-11,48;CL:0000763,2.52e-11,108;CL:0000049,2.52e-11,108;CL:0002194,2.45e-09,59;CL:0000576,2.45e-09,59;CL:0000040,2.45e-09,59;CL:0000559,2.45e-09,59;CL:0000738,4.36e-09,136;CL:0002009,4.72e-09,61;CL:0000097,5.35e-08,5;CL:0002028,5.35e-08,5;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0002031,3.03e-07,120;CL:0000988,4.60e-07,177|ontology_enrichment_development_v019=CL:0002057;5.31e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.72e-33!80;UBERON:0001474!9.89e-31!86;UBERON:0002390!5.21e-27!102;UBERON:0003061!5.21e-27!102;UBERON:0004765!2.97e-25!101;UBERON:0001434!2.97e-25!101;UBERON:0002193!5.01e-24!112;UBERON:0002405!2.01e-21!115;UBERON:0002204!1.29e-16!167;UBERON:0003081!2.44e-12!216;UBERON:0002384!1.39e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.64e-11,76;UBERON:0001474,2.17e-10,82;UBERON:0004765,1.64e-09,90;UBERON:0002405,3.19e-09,93;UBERON:0002390,8.92e-09,98;UBERON:0003061,8.92e-09,98;UBERON:0001434,1.31e-08,100;UBERON:0002193,5.27e-08,108|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.436194716338694,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0.28769239232215,0.256160706529101,0.709446689665756,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0,0,0,0.56738522469114,0.622822248995575,1.25624332628372,0.521482918420201,1.52032191293582,0,1.10483290796269,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8385912337108,0.616339038092582,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr12:100535504..100535511,- | |||
|id=chr12:100535504..100535511,- | |||
|ontology_enrichment_celltype=CL:0002057!7.05e-42!42;CL:0000860!9.73e-39!45;CL:0000557!1.57e-35!71;CL:0000839!3.34e-33!70;CL:0000766!5.58e-33!76;CL:0002009!4.48e-30!65;CL:0002194!2.29e-28!63;CL:0000576!2.29e-28!63;CL:0000040!2.29e-28!63;CL:0000559!2.29e-28!63;CL:0000763!4.05e-26!112;CL:0000049!4.05e-26!112;CL:0002031!2.06e-19!124;CL:0000738!4.57e-18!140;CL:0002032!6.24e-17!165;CL:0000837!6.24e-17!165;CL:0000037!5.79e-16!172;CL:0000566!5.79e-16!172;CL:0000988!6.11e-16!182;CL:0002087!5.09e-14!119;CL:0000134!2.21e-09!358;CL:0002320!4.81e-09!365;CL:0002274!1.38e-08!5;CL:0000457!1.38e-08!5;CL:0002191!1.38e-08!5;CL:0000097!1.38e-08!5;CL:0000831!1.38e-08!5;CL:0002028!1.38e-08!5;CL:0000219!1.49e-08!390;CL:0000048!1.86e-08!430;CL:0000723!3.21e-08!436;CL:0000034!6.49e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.38e-14;33!CL:0002057;2.38e-14;33!CL:0000775;2.07e-12;3!CL:0000473;2.60e-10;39!CL:0000234;2.60e-10;39!CL:0000766;5.44e-09;69!CL:0000576;1.64e-08;48!CL:0000097;5.35e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.10e-16,72;CL:0000860,4.27e-13,42;CL:0002057,4.27e-13,42;CL:0000839,9.20e-13,66;CL:0000557,1.39e-12,67;CL:0000775,2.07e-12,3;CL:0000473,1.56e-11,48;CL:0000234,1.56e-11,48;CL:0000763,2.52e-11,108;CL:0000049,2.52e-11,108;CL:0002194,2.45e-09,59;CL:0000576,2.45e-09,59;CL:0000040,2.45e-09,59;CL:0000559,2.45e-09,59;CL:0000738,4.36e-09,136;CL:0002009,4.72e-09,61;CL:0000097,5.35e-08,5;CL:0002028,5.35e-08,5;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0002031,3.03e-07,120;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.31e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.72e-33!80;UBERON:0001474!9.89e-31!86;UBERON:0002390!5.21e-27!102;UBERON:0003061!5.21e-27!102;UBERON:0004765!2.97e-25!101;UBERON:0001434!2.97e-25!101;UBERON:0002193!5.01e-24!112;UBERON:0002405!2.01e-21!115;UBERON:0002204!1.29e-16!167;UBERON:0003081!2.44e-12!216;UBERON:0002384!1.39e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.64e-11,76;UBERON:0001474,2.17e-10,82;UBERON:0004765,1.64e-09,90;UBERON:0002405,3.19e-09,93;UBERON:0002390,8.92e-09,98;UBERON:0003061,8.92e-09,98;UBERON:0001434,1.31e-08,100;UBERON:0002193,5.27e-08,108 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.436194716338694,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0.28769239232215,0.256160706529101,0.709446689665756,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0,0,0,0.56738522469114,0.622822248995575,1.25624332628372,0.521482918420201,1.52032191293582,0,1.10483290796269,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8385912337108,0.616339038092582,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:100535504..100535511,- | |||
}} |
Revision as of 20:21, 10 September 2013
Short description: | p@chr12:100535504..100535511, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:100535504..100535511, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.10e-16 | 72 |
classical monocyte | 4.27e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.27e-13 | 42 |
myeloid lineage restricted progenitor cell | 9.20e-13 | 66 |
granulocyte monocyte progenitor cell | 1.39e-12 | 67 |
neutrophil | 2.07e-12 | 3 |
defensive cell | 1.56e-11 | 48 |
phagocyte | 1.56e-11 | 48 |
myeloid cell | 2.52e-11 | 108 |
common myeloid progenitor | 2.52e-11 | 108 |
monopoietic cell | 2.45e-09 | 59 |
monocyte | 2.45e-09 | 59 |
monoblast | 2.45e-09 | 59 |
promonocyte | 2.45e-09 | 59 |
leukocyte | 4.36e-09 | 136 |
macrophage dendritic cell progenitor | 4.72e-09 | 61 |
mast cell | 5.35e-08 | 5 |
basophil mast progenitor cell | 5.35e-08 | 5 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic lineage restricted progenitor cell | 3.03e-07 | 120 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.64e-11 | 76 |
bone element | 2.17e-10 | 82 |
skeletal element | 1.64e-09 | 90 |
immune system | 3.19e-09 | 93 |
hematopoietic system | 8.92e-09 | 98 |
blood island | 8.92e-09 | 98 |
skeletal system | 1.31e-08 | 100 |
hemolymphoid system | 5.27e-08 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.