FFCP PHASE1:Hg19::chr12:50401950..50401952,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:50401950..50401952,-|id=chr12:50401950..50401952,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;3.59e-07;2!CL:0000558;3.59e-07;2|ontology_enrichment_celltype_v019_2=CL:0000764,2.58e-07,2;CL:0000765,2.58e-07,2;CL:0000050,2.58e-07,2;CL:0000038,2.58e-07,2;CL:0000558,2.58e-07,2;CL:0000547,2.58e-07,2;CL:0000549,2.58e-07,2;CL:0000550,2.58e-07,2;CL:0000552,2.58e-07,2|ontology_enrichment_development_v019=UBERON:0005425;4.48e-13;1|ontology_enrichment_disease=DOID:162!1.89e-16!235;DOID:14566!3.64e-16!239;DOID:0050687!6.73e-10!143;DOID:2531!1.03e-08!51;DOID:0060083!1.03e-08!51;DOID:0050686!4.77e-08!137|ontology_enrichment_disease_v019=DOID:1799;4.48e-13;1!DOID:10165;4.48e-13;1!DOID:1798;4.48e-13;1|ontology_enrichment_disease_v019_2=DOID:1799,7.68e-13,1;DOID:10165,7.68e-13,1;DOID:1798,7.68e-13,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000941;4.48e-13;1!UBERON:0001785;4.48e-13;1!UBERON:0002464;4.48e-13;1!UBERON:0004904;4.48e-13;1!UBERON:0001021;4.48e-13;1!UBERON:0002346;1.09e-12;4!UBERON:0000923;1.09e-12;4!UBERON:0010316;1.09e-12;4!UBERON:0005291;1.09e-12;4!UBERON:0002050;2.46e-10;5!UBERON:0005423;2.46e-10;5!UBERON:0003714;3.59e-07;2!UBERON:0005162;3.59e-07;2!UBERON:0000122;3.59e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.76e-13,1;UBERON:0001785,3.76e-13,1;UBERON:0002464,3.76e-13,1;UBERON:0004904,3.76e-13,1;UBERON:0001021,3.76e-13,1;UBERON:0003902,3.76e-13,1;UBERON:0005425,3.76e-13,1;UBERON:0003714,3.28e-07,2;UBERON:0005162,3.28e-07,2;UBERON:0000122,3.28e-07,2|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.273748850145768,0.502170558379211,0.229240217243854,0.246301768349837,0.314843125254717,0,0,0,0,0,0,0.774672005803016,1.27952309238679,0.293600439334847,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.384273959177026,0.130059347559878,0.164437904603676,0.552700035571697,0,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.175669571386252,0.130979075497713,0,0.370784442784429,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.357198913136319,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,1.43418310374407,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.485618833104395,0.140450806702248,0.408308342509787,0.368502951935304,0,0,0.247266929278557,0,0,0.841680569770331,0.125118519871964,0,0.438977620880838,0,0,0,0.717558542755448,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0.201504196455281,0.339121184620975,0,0,0,0.121973706129595,0,0,0.310983165046111,0,0.72995471815166,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,1.58040879591855,0,0,0,0.297262324577456,0,0,0,0,0.290633938513962,0,0.492663237895943,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0.35142424497814,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,1.53481913652154,0.522870902049801,0,0,0,0,0.27470839445503,0.330037999682352,0,0,0,0,0.462145851343933,0,0.275673144969061,0.322260734604821,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0.79312517629427,0.106824071127473,0,0.245040215981032,0.929015875628594,0.432807638929335,0.711418433484141,0,0.798317485731266,0,0.423347165447766,0.649243880549111,0,0.456469358066384,0,0,0.169291777801603,0.481764225311099,0.403599414382095,0.425846237690326,0.343505344755765,0.307240764308458,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0.422008249231538,0,0.6592154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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:50401950..50401952,- | |||
|id=chr12:50401950..50401952,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.59e-07;2!CL:0000558;3.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.58e-07,2;CL:0000765,2.58e-07,2;CL:0000050,2.58e-07,2;CL:0000038,2.58e-07,2;CL:0000558,2.58e-07,2;CL:0000547,2.58e-07,2;CL:0000549,2.58e-07,2;CL:0000550,2.58e-07,2;CL:0000552,2.58e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.48e-13;1 | |||
|ontology_enrichment_disease=DOID:162!1.89e-16!235;DOID:14566!3.64e-16!239;DOID:0050687!6.73e-10!143;DOID:2531!1.03e-08!51;DOID:0060083!1.03e-08!51;DOID:0050686!4.77e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1799;4.48e-13;1!DOID:10165;4.48e-13;1!DOID:1798;4.48e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,7.68e-13,1;DOID:10165,7.68e-13,1;DOID:1798,7.68e-13,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.48e-13;1!UBERON:0001785;4.48e-13;1!UBERON:0002464;4.48e-13;1!UBERON:0004904;4.48e-13;1!UBERON:0001021;4.48e-13;1!UBERON:0002346;1.09e-12;4!UBERON:0000923;1.09e-12;4!UBERON:0010316;1.09e-12;4!UBERON:0005291;1.09e-12;4!UBERON:0002050;2.46e-10;5!UBERON:0005423;2.46e-10;5!UBERON:0003714;3.59e-07;2!UBERON:0005162;3.59e-07;2!UBERON:0000122;3.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.76e-13,1;UBERON:0001785,3.76e-13,1;UBERON:0002464,3.76e-13,1;UBERON:0004904,3.76e-13,1;UBERON:0001021,3.76e-13,1;UBERON:0003902,3.76e-13,1;UBERON:0005425,3.76e-13,1;UBERON:0003714,3.28e-07,2;UBERON:0005162,3.28e-07,2;UBERON:0000122,3.28e-07,2 | |||
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| |||
|short_description=p@chr12:50401950..50401952,- | |||
}} |
Revision as of 22:58, 10 September 2013
Short description: | p@chr12:50401950..50401952, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:50401950..50401952, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.58e-07 | 2 |
erythroblast | 2.58e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 2.58e-07 | 2 |
erythroid progenitor cell | 2.58e-07 | 2 |
reticulocyte | 2.58e-07 | 2 |
proerythroblast | 2.58e-07 | 2 |
basophilic erythroblast | 2.58e-07 | 2 |
polychromatophilic erythroblast | 2.58e-07 | 2 |
orthochromatic erythroblast | 2.58e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.76e-13 | 1 |
cranial nerve | 3.76e-13 | 1 |
nerve trunk | 3.76e-13 | 1 |
nerve connecting eye with brain | 3.76e-13 | 1 |
nerve | 3.76e-13 | 1 |
retinal neural layer | 3.76e-13 | 1 |
presumptive neural retina | 3.76e-13 | 1 |
neural tissue | 3.28e-07 | 2 |
multi cell component structure | 3.28e-07 | 2 |
neuron projection bundle | 3.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 7.68e-13 | 1 |
endocrine pancreas cancer | 7.68e-13 | 1 |
pancreatic endocrine carcinoma | 7.68e-13 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.