FFCP PHASE1:Hg19::chr12:9823796..9823803,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3295|description=CAGE_peak_at_chr12:9823796..9823803,-|id=chr12:9823796..9823803,-|ontology_enrichment_celltype=CL:0000542!1.77e-49!53;CL:0000051!1.77e-49!53;CL:0000838!6.41e-48!52;CL:0002087!1.93e-43!119;CL:0000791!3.99e-39!18;CL:0000789!3.99e-39!18;CL:0002420!3.99e-39!18;CL:0002419!3.99e-39!18;CL:0000790!3.99e-39!18;CL:0000738!6.23e-38!140;CL:0000084!1.25e-36!25;CL:0000827!1.25e-36!25;CL:0002031!2.49e-34!124;CL:0000037!3.43e-29!172;CL:0000566!3.43e-29!172;CL:0000988!6.35e-28!182;CL:0002032!4.28e-27!165;CL:0000837!4.28e-27!165;CL:0000625!1.06e-24!11;CL:0000624!2.89e-14!6;CL:0000945!2.48e-10!24;CL:0000826!2.48e-10!24;CL:0000898!2.40e-08!3;CL:0000623!3.50e-08!3;CL:0000825!3.50e-08!3;CL:0002057!1.74e-07!42;CL:0000842!4.18e-07!3;CL:0000134!6.37e-07!358;CL:0000860!9.02e-07!45|ontology_enrichment_celltype_v019=CL:0000791;3.95e-57;18!CL:0000789;3.95e-57;18!CL:0002419;3.95e-57;18!CL:0000084;1.14e-50;25!CL:0000625;1.94e-37;11!CL:0000542;2.51e-25;53!CL:0000624;7.11e-25;6!CL:0000898;7.51e-14;3!CL:0000623;1.21e-13;3!CL:0000815;8.79e-10;2!CL:0000792;8.79e-10;2!CL:0002677;8.79e-10;2|ontology_enrichment_celltype_v019_2=CL:0000791,5.48e-57,18;CL:0000789,5.48e-57,18;CL:0002420,5.48e-57,18;CL:0002419,5.48e-57,18;CL:0000790,5.48e-57,18;CL:0000084,2.01e-50,25;CL:0000827,2.01e-50,25;CL:0000838,1.19e-48,52;CL:0000542,1.30e-47,53;CL:0000051,1.30e-47,53;CL:0000625,2.87e-37,11;CL:0000624,6.69e-25,6;CL:0002087,1.60e-23,115;CL:0000738,1.64e-20,136;CL:0002031,6.53e-19,120;CL:0000037,2.61e-15,168;CL:0000988,3.46e-14,177;CL:0000898,5.09e-14,3;CL:0002032,9.25e-14,161;CL:0000837,9.25e-14,161;CL:0000623,1.02e-13,3;CL:0000825,1.02e-13,3;CL:0000815,7.24e-10,2;CL:0000792,7.24e-10,2;CL:0002677,7.24e-10,2|ontology_enrichment_development_v019=CL:0000790;3.95e-57;18!CL:0000051;2.51e-25;53|ontology_enrichment_disease=DOID:0060058!2.23e-07!10|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.58e-11!102;UBERON:0003061!3.58e-11!102;UBERON:0002193!2.44e-10!112;UBERON:0004177!2.96e-10!7;UBERON:0000178!5.31e-08!15;UBERON:0000179!5.31e-08!15;UBERON:0000463!5.31e-08!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0.393364276848904,3.0706351847777,0,0,0,0,0.309868802321207,1.42169232487422,0,0,0.601633342410425,0.651032612147555,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0.580418477257168,0,0,0,0.521482918420201,0.217188844705117,0,1.47311054395026,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0,0,0.574752439954483,1.98313461835459,1.90810750907073,0,0,0,0,0.560508562981536,0,1.37696839079683,1.57204305099666,2.05601498999509,0.83593247695339,2.93330039970231,2.8406868344084,5.84480185223734,3.56513462032555,4.41908861212256,3.76607620792156,4.33286182024025,2.94610035369053,3.77172107923647,10.0307121808242,10.7776506936481,2.89803085735052,2.81744470007915,1.60524496853828,3.1360657141493,3.51258962362455,3.83220493601921,4.12352934579156,1.77113784413652,3.18565414324097,2.60433381542567,2.85135613334512,0.301150238155546,2.8157054453972,7.49584359314075,3.07810427657222,4.10563998460523,2.82249440514625,3.20928234940209,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,2.75843064282698,4.52817907204986,2.95188983443421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.07857100409308,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952927101831156,0,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22587722705226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1067874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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3295 | |||
|description=CAGE_peak_at_chr12:9823796..9823803,- | |||
|id=chr12:9823796..9823803,- | |||
|ontology_enrichment_celltype=CL:0000542!1.77e-49!53;CL:0000051!1.77e-49!53;CL:0000838!6.41e-48!52;CL:0002087!1.93e-43!119;CL:0000791!3.99e-39!18;CL:0000789!3.99e-39!18;CL:0002420!3.99e-39!18;CL:0002419!3.99e-39!18;CL:0000790!3.99e-39!18;CL:0000738!6.23e-38!140;CL:0000084!1.25e-36!25;CL:0000827!1.25e-36!25;CL:0002031!2.49e-34!124;CL:0000037!3.43e-29!172;CL:0000566!3.43e-29!172;CL:0000988!6.35e-28!182;CL:0002032!4.28e-27!165;CL:0000837!4.28e-27!165;CL:0000625!1.06e-24!11;CL:0000624!2.89e-14!6;CL:0000945!2.48e-10!24;CL:0000826!2.48e-10!24;CL:0000898!2.40e-08!3;CL:0000623!3.50e-08!3;CL:0000825!3.50e-08!3;CL:0002057!1.74e-07!42;CL:0000842!4.18e-07!3;CL:0000134!6.37e-07!358;CL:0000860!9.02e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.95e-57;18!CL:0000789;3.95e-57;18!CL:0002419;3.95e-57;18!CL:0000084;1.14e-50;25!CL:0000625;1.94e-37;11!CL:0000542;2.51e-25;53!CL:0000624;7.11e-25;6!CL:0000898;7.51e-14;3!CL:0000623;1.21e-13;3!CL:0000815;8.79e-10;2!CL:0000792;8.79e-10;2!CL:0002677;8.79e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.48e-57,18;CL:0000789,5.48e-57,18;CL:0002420,5.48e-57,18;CL:0002419,5.48e-57,18;CL:0000790,5.48e-57,18;CL:0000084,2.01e-50,25;CL:0000827,2.01e-50,25;CL:0000838,1.19e-48,52;CL:0000542,1.30e-47,53;CL:0000051,1.30e-47,53;CL:0000625,2.87e-37,11;CL:0000624,6.69e-25,6;CL:0002087,1.60e-23,115;CL:0000738,1.64e-20,136;CL:0002031,6.53e-19,120;CL:0000037,2.61e-15,168;CL:0000988,3.46e-14,177;CL:0000898,5.09e-14,3;CL:0002032,9.25e-14,161;CL:0000837,9.25e-14,161;CL:0000623,1.02e-13,3;CL:0000825,1.02e-13,3;CL:0000815,7.24e-10,2;CL:0000792,7.24e-10,2;CL:0002677,7.24e-10,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.95e-57;18!CL:0000051;2.51e-25;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.23e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.58e-11!102;UBERON:0003061!3.58e-11!102;UBERON:0002193!2.44e-10!112;UBERON:0004177!2.96e-10!7;UBERON:0000178!5.31e-08!15;UBERON:0000179!5.31e-08!15;UBERON:0000463!5.31e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0.393364276848904,3.0706351847777,0,0,0,0,0.309868802321207,1.42169232487422,0,0,0.601633342410425,0.651032612147555,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0.580418477257168,0,0,0,0.521482918420201,0.217188844705117,0,1.47311054395026,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0,0,0.574752439954483,1.98313461835459,1.90810750907073,0,0,0,0,0.560508562981536,0,1.37696839079683,1.57204305099666,2.05601498999509,0.83593247695339,2.93330039970231,2.8406868344084,5.84480185223734,3.56513462032555,4.41908861212256,3.76607620792156,4.33286182024025,2.94610035369053,3.77172107923647,10.0307121808242,10.7776506936481,2.89803085735052,2.81744470007915,1.60524496853828,3.1360657141493,3.51258962362455,3.83220493601921,4.12352934579156,1.77113784413652,3.18565414324097,2.60433381542567,2.85135613334512,0.301150238155546,2.8157054453972,7.49584359314075,3.07810427657222,4.10563998460523,2.82249440514625,3.20928234940209,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,2.75843064282698,4.52817907204986,2.95188983443421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.07857100409308,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952927101831156,0,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22587722705226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19992437512958,0,12.5716935152395,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0.999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:9823796..9823803,- | |||
}} |
Revision as of 01:11, 11 September 2013
Short description: | p@chr12:9823796..9823803, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:9823796..9823803, - |
Coexpression cluster: | C3295_myeloma_lymphangiectasia_CD4_adult_mycosis_CD8_hereditary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.48e-57 | 18 |
alpha-beta T cell | 5.48e-57 | 18 |
immature T cell | 5.48e-57 | 18 |
mature T cell | 5.48e-57 | 18 |
immature alpha-beta T cell | 5.48e-57 | 18 |
T cell | 2.01e-50 | 25 |
pro-T cell | 2.01e-50 | 25 |
lymphoid lineage restricted progenitor cell | 1.19e-48 | 52 |
lymphocyte | 1.30e-47 | 53 |
common lymphoid progenitor | 1.30e-47 | 53 |
CD8-positive, alpha-beta T cell | 2.87e-37 | 11 |
CD4-positive, alpha-beta T cell | 6.69e-25 | 6 |
nongranular leukocyte | 1.60e-23 | 115 |
leukocyte | 1.64e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 6.53e-19 | 120 |
hematopoietic stem cell | 2.61e-15 | 168 |
hematopoietic cell | 3.46e-14 | 177 |
naive T cell | 5.09e-14 | 3 |
hematopoietic oligopotent progenitor cell | 9.25e-14 | 161 |
hematopoietic multipotent progenitor cell | 9.25e-14 | 161 |
natural killer cell | 1.02e-13 | 3 |
pro-NK cell | 1.02e-13 | 3 |
regulatory T cell | 7.24e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.24e-10 | 2 |
naive regulatory T cell | 7.24e-10 | 2 |
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