FFCP PHASE1:Hg19::chr14:103602735..103602746,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7127|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11895|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000561217_5end|coexpression_cluster_id=C2278|description=CAGE_peak_9_at_TNFAIP2_5end|id=chr14:103602735..103602746,+|ontology_enrichment_celltype=CL:0002057!7.74e-39!42;CL:0002194!2.15e-37!63;CL:0000576!2.15e-37!63;CL:0000040!2.15e-37!63;CL:0000559!2.15e-37!63;CL:0002009!2.52e-37!65;CL:0000766!5.60e-37!76;CL:0000860!3.87e-35!45;CL:0000557!7.14e-34!71;CL:0000839!4.45e-33!70;CL:0000763!3.31e-25!112;CL:0000049!3.31e-25!112;CL:0000738!1.72e-18!140;CL:0002087!6.66e-16!119;CL:0002031!1.12e-13!124;CL:0000037!7.45e-13!172;CL:0000566!7.45e-13!172;CL:0002032!2.65e-12!165;CL:0000837!2.65e-12!165;CL:0000988!5.55e-12!182;CL:0002393!4.77e-07!9;CL:0002397!4.77e-07!9|ontology_enrichment_celltype_v019=CL:0000860;5.38e-52;33!CL:0002057;5.38e-52;33!CL:0000473;5.27e-46;39!CL:0000234;5.27e-46;39!CL:0000576;1.79e-35;48!CL:0000766;2.78e-25;69!CL:0000763;6.75e-13;100!CL:0000771;1.41e-09;2!CL:0002087;1.14e-07;104!CL:0002393;6.85e-07;6!CL:0002397;6.85e-07;6!CL:0000235;8.40e-07;6|ontology_enrichment_celltype_v019_2=CL:0000473,1.62e-63,48;CL:0000234,1.62e-63,48;CL:0000860,3.41e-58,42;CL:0002057,3.41e-58,42;CL:0002194,2.02e-53,59;CL:0000576,2.02e-53,59;CL:0000040,2.02e-53,59;CL:0000559,2.02e-53,59;CL:0000766,9.64e-53,72;CL:0002009,1.80e-51,61;CL:0000839,4.15e-47,66;CL:0000557,2.59e-46,67;CL:0000763,3.67e-35,108;CL:0000049,3.67e-35,108;CL:0000738,2.09e-26,136;CL:0002087,2.89e-24,115;CL:0002031,5.62e-23,120;CL:0002032,3.76e-21,161;CL:0000837,3.76e-21,161;CL:0000037,5.85e-20,168;CL:0000988,1.45e-18,177;CL:0000771,1.39e-09,2;CL:0000235,9.51e-07,6|ontology_enrichment_development_v019=CL:0002057;9.89e-41;42!CL:0000049;3.32e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.72e-29!80;UBERON:0001474!5.85e-28!86;UBERON:0002390!7.84e-28!102;UBERON:0003061!7.84e-28!102;UBERON:0002193!4.01e-25!112;UBERON:0004765!8.48e-24!101;UBERON:0001434!8.48e-24!101;UBERON:0002405!1.31e-21!115;UBERON:0002204!1.30e-10!167;UBERON:0000926!1.33e-08!448;UBERON:0004120!1.33e-08!448;UBERON:0006603!1.33e-08!448;UBERON:0000062!8.38e-07!511|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.40e-40,76;UBERON:0001474,1.11e-36,82;UBERON:0004765,7.67e-33,90;UBERON:0002405,1.43e-31,93;UBERON:0002390,1.26e-29,98;UBERON:0003061,1.26e-29,98;UBERON:0001434,6.70e-29,100;UBERON:0002193,2.87e-26,108;UBERON:0002204,1.24e-14,167;UBERON:0003081,6.97e-12,203|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0,0,1.18009283054671,0.383829398097213,0.619264493264304,0,0,0,0,0,0,4.9859586767869,1.20326668482085,1.73608696572681,0.895661896959697,0.971680998056939,2.83333124397605,0.290796477559129,0.377875943688809,0.727752183563449,3.0215774797739,1.23350366406548,1.23882548358041,4.02769349251011,3.07392847834921,2.83778675866302,1.72372840368309,0.645484683583826,0,0.752969358170419,1.09162460023138,0.898893937780338,2.14258724659632,3.20929027076094,1.27867425159808,2.63881040149373,1.59570926097305,2.55734850319616,2.03146467040009,5.10646702222026,7.4738669879469,2.26123798731069,2.60741459210101,0.868755378820466,0.605399502633369,9.94349617166425,6.64571013625857,0.422510572623884,0.425208599930087,0.209658645508376,0.336985893439485,0.450530678524519,1.28580469357664,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.97364218096405,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,1.47730203652438,0,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.82707210449155,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7127 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11895 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000561217_5end | |||
|coexpression_cluster_id=C2278 | |||
|description=CAGE_peak_9_at_TNFAIP2_5end | |||
|id=chr14:103602735..103602746,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.74e-39!42;CL:0002194!2.15e-37!63;CL:0000576!2.15e-37!63;CL:0000040!2.15e-37!63;CL:0000559!2.15e-37!63;CL:0002009!2.52e-37!65;CL:0000766!5.60e-37!76;CL:0000860!3.87e-35!45;CL:0000557!7.14e-34!71;CL:0000839!4.45e-33!70;CL:0000763!3.31e-25!112;CL:0000049!3.31e-25!112;CL:0000738!1.72e-18!140;CL:0002087!6.66e-16!119;CL:0002031!1.12e-13!124;CL:0000037!7.45e-13!172;CL:0000566!7.45e-13!172;CL:0002032!2.65e-12!165;CL:0000837!2.65e-12!165;CL:0000988!5.55e-12!182;CL:0002393!4.77e-07!9;CL:0002397!4.77e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.38e-52;33!CL:0002057;5.38e-52;33!CL:0000473;5.27e-46;39!CL:0000234;5.27e-46;39!CL:0000576;1.79e-35;48!CL:0000766;2.78e-25;69!CL:0000763;6.75e-13;100!CL:0000771;1.41e-09;2!CL:0002087;1.14e-07;104!CL:0002393;6.85e-07;6!CL:0002397;6.85e-07;6!CL:0000235;8.40e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.62e-63,48;CL:0000234,1.62e-63,48;CL:0000860,3.41e-58,42;CL:0002057,3.41e-58,42;CL:0002194,2.02e-53,59;CL:0000576,2.02e-53,59;CL:0000040,2.02e-53,59;CL:0000559,2.02e-53,59;CL:0000766,9.64e-53,72;CL:0002009,1.80e-51,61;CL:0000839,4.15e-47,66;CL:0000557,2.59e-46,67;CL:0000763,3.67e-35,108;CL:0000049,3.67e-35,108;CL:0000738,2.09e-26,136;CL:0002087,2.89e-24,115;CL:0002031,5.62e-23,120;CL:0002032,3.76e-21,161;CL:0000837,3.76e-21,161;CL:0000037,5.85e-20,168;CL:0000988,1.45e-18,177;CL:0000771,1.39e-09,2;CL:0000235,9.51e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;9.89e-41;42!CL:0000049;3.32e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.72e-29!80;UBERON:0001474!5.85e-28!86;UBERON:0002390!7.84e-28!102;UBERON:0003061!7.84e-28!102;UBERON:0002193!4.01e-25!112;UBERON:0004765!8.48e-24!101;UBERON:0001434!8.48e-24!101;UBERON:0002405!1.31e-21!115;UBERON:0002204!1.30e-10!167;UBERON:0000926!1.33e-08!448;UBERON:0004120!1.33e-08!448;UBERON:0006603!1.33e-08!448;UBERON:0000062!8.38e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.40e-40,76;UBERON:0001474,1.11e-36,82;UBERON:0004765,7.67e-33,90;UBERON:0002405,1.43e-31,93;UBERON:0002390,1.26e-29,98;UBERON:0003061,1.26e-29,98;UBERON:0001434,6.70e-29,100;UBERON:0002193,2.87e-26,108;UBERON:0002204,1.24e-14,167;UBERON:0003081,6.97e-12,203 | |||
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| |||
|short_description=p9@TNFAIP2 | |||
}} |
Revision as of 03:23, 11 September 2013
Short description: | p9@TNFAIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_TNFAIP2_5end |
Coexpression cluster: | C2278_squamous_CD14_embryonic_mesothelioma_malignant_Monocytederived_glassy |
Association with transcript: | 0bp_to_ENST00000561217_5end |
EntrezGene: | TNFAIP2 |
HGNC: | 11895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.62e-63 | 48 |
phagocyte | 1.62e-63 | 48 |
classical monocyte | 3.41e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.41e-58 | 42 |
monopoietic cell | 2.02e-53 | 59 |
monocyte | 2.02e-53 | 59 |
monoblast | 2.02e-53 | 59 |
promonocyte | 2.02e-53 | 59 |
myeloid leukocyte | 9.64e-53 | 72 |
macrophage dendritic cell progenitor | 1.80e-51 | 61 |
myeloid lineage restricted progenitor cell | 4.15e-47 | 66 |
granulocyte monocyte progenitor cell | 2.59e-46 | 67 |
myeloid cell | 3.67e-35 | 108 |
common myeloid progenitor | 3.67e-35 | 108 |
leukocyte | 2.09e-26 | 136 |
nongranular leukocyte | 2.89e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 5.62e-23 | 120 |
hematopoietic oligopotent progenitor cell | 3.76e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.76e-21 | 161 |
hematopoietic stem cell | 5.85e-20 | 168 |
hematopoietic cell | 1.45e-18 | 177 |
eosinophil | 1.39e-09 | 2 |
macrophage | 9.51e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.40e-40 | 76 |
bone element | 1.11e-36 | 82 |
skeletal element | 7.67e-33 | 90 |
immune system | 1.43e-31 | 93 |
hematopoietic system | 1.26e-29 | 98 |
blood island | 1.26e-29 | 98 |
skeletal system | 6.70e-29 | 100 |
hemolymphoid system | 2.87e-26 | 108 |
musculoskeletal system | 1.24e-14 | 167 |
lateral plate mesoderm | 6.97e-12 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.