FFCP PHASE1:Hg19::chr14:22538852..22538859,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=12119|TSSclassifier=S|UniProt=|association_with_transcript=32bp_to_ENST00000390450_5end|coexpression_cluster_id=C52|description=CAGE_peak_3_at_TRAV22_5end|id=chr14:22538852..22538859,+|ontology_enrichment_celltype=CL:0000791!5.71e-21!18;CL:0000789!5.71e-21!18;CL:0002420!5.71e-21!18;CL:0002419!5.71e-21!18;CL:0000790!5.71e-21!18;CL:0000084!7.73e-18!25;CL:0000827!7.73e-18!25;CL:0000624!8.85e-17!6;CL:0000898!6.81e-13!3;CL:0000838!4.17e-12!52;CL:0000542!8.06e-12!53;CL:0000051!8.06e-12!53;CL:0000625!2.47e-09!11;CL:0000815!3.99e-09!2;CL:0000792!3.99e-09!2;CL:0002677!3.99e-09!2;CL:0000037!6.96e-07!172;CL:0000566!6.96e-07!172;CL:0000738!9.30e-07!140|ontology_enrichment_celltype_v019=CL:0000084;2.24e-07;25|ontology_enrichment_celltype_v019_2=CL:0000084,2.14e-07,25;CL:0000827,2.14e-07,25|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!1.50e-10!10;UBERON:0002370!2.34e-10!4;UBERON:0005058!2.34e-10!4;UBERON:0009113!2.34e-10!4;UBERON:0003295!2.34e-10!4;UBERON:0005562!2.34e-10!4;UBERON:0004177!1.02e-09!7;UBERON:0003351!4.98e-07!6;UBERON:0001042!7.68e-07!10;UBERON:0009145!7.68e-07!10|ontology_enrichment_uberon_v019=UBERON:0002370;5.15e-21;2!UBERON:0005058;5.15e-21;2!UBERON:0009113;5.15e-21;2!UBERON:0002114;1.71e-14;2!UBERON:0002108;3.10e-09;4!UBERON:0004177;3.10e-09;5!UBERON:0005057;3.10e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0002114,2.09e-14,2;UBERON:0002370,3.10e-11,4;UBERON:0005058,3.10e-11,4;UBERON:0009113,3.10e-11,4;UBERON:0003295,3.10e-11,4;UBERON:0005562,3.10e-11,4;UBERON:0002108,3.49e-09,4;UBERON:0003351,6.34e-08,6;UBERON:0004177,5.70e-07,7;UBERON:0005057,5.70e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0,1.33749196312542,0.32592226663359,0.473447805734733,0,0.668462741311041,0.294605907474837,0.221533894583621,0,0.384273959177026,0.390178042679635,0.822189523018381,0.276350017785848,0,0.14828656316206,0,0,0.906474741580529,0.383220493601921,0,0.759059076058509,0.95569624297229,0,0,0,0.255973222308837,0,0.473554504088034,1.64225599384209,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,19.3911488642812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839655827868079,1.61394257169231,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@TRAV22}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12119 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=32bp_to_ENST00000390450_5end | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_3_at_TRAV22_5end | |||
|id=chr14:22538852..22538859,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.71e-21!18;CL:0000789!5.71e-21!18;CL:0002420!5.71e-21!18;CL:0002419!5.71e-21!18;CL:0000790!5.71e-21!18;CL:0000084!7.73e-18!25;CL:0000827!7.73e-18!25;CL:0000624!8.85e-17!6;CL:0000898!6.81e-13!3;CL:0000838!4.17e-12!52;CL:0000542!8.06e-12!53;CL:0000051!8.06e-12!53;CL:0000625!2.47e-09!11;CL:0000815!3.99e-09!2;CL:0000792!3.99e-09!2;CL:0002677!3.99e-09!2;CL:0000037!6.96e-07!172;CL:0000566!6.96e-07!172;CL:0000738!9.30e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.24e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.14e-07,25;CL:0000827,2.14e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!1.50e-10!10;UBERON:0002370!2.34e-10!4;UBERON:0005058!2.34e-10!4;UBERON:0009113!2.34e-10!4;UBERON:0003295!2.34e-10!4;UBERON:0005562!2.34e-10!4;UBERON:0004177!1.02e-09!7;UBERON:0003351!4.98e-07!6;UBERON:0001042!7.68e-07!10;UBERON:0009145!7.68e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.15e-21;2!UBERON:0005058;5.15e-21;2!UBERON:0009113;5.15e-21;2!UBERON:0002114;1.71e-14;2!UBERON:0002108;3.10e-09;4!UBERON:0004177;3.10e-09;5!UBERON:0005057;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,2.09e-14,2;UBERON:0002370,3.10e-11,4;UBERON:0005058,3.10e-11,4;UBERON:0009113,3.10e-11,4;UBERON:0003295,3.10e-11,4;UBERON:0005562,3.10e-11,4;UBERON:0002108,3.49e-09,4;UBERON:0003351,6.34e-08,6;UBERON:0004177,5.70e-07,7;UBERON:0005057,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0,1.33749196312542,0.32592226663359,0.473447805734733,0,0.668462741311041,0.294605907474837,0.221533894583621,0,0.384273959177026,0.390178042679635,0.822189523018381,0.276350017785848,0,0.14828656316206,0,0,0.906474741580529,0.383220493601921,0,0.759059076058509,0.95569624297229,0,0,0,0.255973222308837,0,0.473554504088034,1.64225599384209,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,19.3911488642812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839655827868079,1.61394257169231,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@TRAV22 | |||
}} |
Revision as of 03:49, 11 September 2013
Short description: | p3@TRAV22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TRAV22_5end |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | 32bp_to_ENST00000390450_5end |
EntrezGene: | NA |
HGNC: | 12119 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.14e-07 | 25 |
pro-T cell | 2.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
duodenum | 2.09e-14 | 2 |
thymus | 3.10e-11 | 4 |
hemolymphoid system gland | 3.10e-11 | 4 |
thymic region | 3.10e-11 | 4 |
pharyngeal gland | 3.10e-11 | 4 |
thymus primordium | 3.10e-11 | 4 |
small intestine | 3.49e-09 | 4 |
pharyngeal epithelium | 6.34e-08 | 6 |
hemopoietic organ | 5.70e-07 | 7 |
immune organ | 5.70e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.