FFCP PHASE1:Hg19::chr14:81425833..81425857,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=145508|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20359|TSSclassifier=S|UniProt=G3V3F4,G3V3U2|association_with_transcript=0bp_to_ENST00000556042,ENST00000556800,ENST00000556981_5end|coexpression_cluster_id=C28|description=CAGE_peak_4_at_CEP128_5end|id=chr14:81425833..81425857,-|ontology_enrichment_celltype=CL:0000542!7.75e-39!53;CL:0000051!7.75e-39!53;CL:0000838!3.43e-37!52;CL:0000945!1.38e-19!24;CL:0000826!1.38e-19!24;CL:0000236!3.61e-17!14;CL:0002087!5.02e-16!119;CL:0000084!9.16e-15!25;CL:0000827!9.16e-15!25;CL:0000738!1.00e-14!140;CL:0000624!1.27e-12!6;CL:0000080!1.59e-11!6;CL:0002031!2.55e-11!124;CL:0000988!5.42e-11!182;CL:0000037!6.18e-10!172;CL:0000566!6.18e-10!172;CL:0000791!3.49e-09!18;CL:0000789!3.49e-09!18;CL:0002420!3.49e-09!18;CL:0002419!3.49e-09!18;CL:0000790!3.49e-09!18;CL:0002032!4.41e-08!165;CL:0000837!4.41e-08!165;CL:0000898!3.80e-07!3;CL:0000817!6.22e-07!3|ontology_enrichment_celltype_v019=CL:0000236;7.22e-26;13!CL:0000945;4.23e-24;24!CL:0000542;7.70e-23;53!CL:0000624;1.89e-17;6!CL:0000084;8.95e-10;25!CL:0000898;9.97e-07;3|ontology_enrichment_celltype_v019_2=CL:0000542,3.10e-31,53;CL:0000051,3.10e-31,53;CL:0000838,7.96e-29,52;CL:0000945,3.51e-24,24;CL:0000826,3.51e-24,24;CL:0000236,5.36e-24,14;CL:0000624,2.46e-17,6;CL:0002087,1.48e-11,115;CL:0000738,3.29e-10,136;CL:0000084,1.05e-09,25;CL:0000827,1.05e-09,25;CL:0002031,1.06e-09,120;CL:0000988,1.70e-08,177;CL:0000037,2.36e-07,168;CL:0002032,5.92e-07,161;CL:0000837,5.92e-07,161|ontology_enrichment_development_v019=CL:0000051;7.70e-23;53|ontology_enrichment_disease=DOID:0060058!8.53e-10!10|ontology_enrichment_disease_v019=DOID:0060058;1.89e-07;10|ontology_enrichment_disease_v019_2=DOID:0060058,1.83e-07,10|ontology_enrichment_uberon=UBERON:0000178!1.26e-16!15;UBERON:0000179!1.26e-16!15;UBERON:0000463!1.26e-16!15;UBERON:0004177!4.59e-14!7;UBERON:0007023!4.28e-12!115;UBERON:0003408!2.91e-09!10;UBERON:0002370!5.58e-09!4;UBERON:0005058!5.58e-09!4;UBERON:0009113!5.58e-09!4;UBERON:0003295!5.58e-09!4;UBERON:0005562!5.58e-09!4;UBERON:0000974!2.70e-07!10;UBERON:0001042!4.61e-07!10;UBERON:0009145!4.61e-07!10;UBERON:0002106!9.50e-07!3;UBERON:0004854!9.50e-07!3;UBERON:0009034!9.50e-07!3;UBERON:0002095!9.50e-07!3;UBERON:0004782!9.50e-07!3;UBERON:0003281!9.50e-07!3;UBERON:0009664!9.50e-07!3;UBERON:0002296!9.50e-07!3;UBERON:0005602!9.50e-07!3;UBERON:0001179!9.50e-07!3;UBERON:0006293!9.50e-07!3|ontology_enrichment_uberon_v019=UBERON:0004177;1.30e-14;5!UBERON:0005057;1.30e-14;5!UBERON:0002370;1.46e-10;2!UBERON:0005058;1.46e-10;2!UBERON:0009113;1.46e-10;2!UBERON:0000341;2.01e-09;2!UBERON:0002390;6.81e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.65e-15,7;UBERON:0005057,1.65e-15,7;UBERON:0000974,7.74e-11,10;UBERON:0002370,9.66e-11,4;UBERON:0005058,9.66e-11,4;UBERON:0009113,9.66e-11,4;UBERON:0003295,9.66e-11,4;UBERON:0005562,9.66e-11,4;UBERON:0009722,1.20e-09,11;UBERON:0007690,1.20e-09,11;UBERON:0000341,1.62e-09,2;UBERON:0001042,2.51e-07,10;UBERON:0009145,2.51e-07,10;UBERON:0003351,2.71e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,4.6480320348181,0.853015394924529,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,5.46138611262132,2.66852776159066,5.9742231159311,2.40237592221607,6.8970292794538,2.64417949113945,3.81621501814146,0,0,0,0,0,0.263384084775077,1.37696839079683,1.17903228824749,2.2616164889946,0.334372990781356,0.651844533267181,0.946895611469467,0,2.45103005147382,9.42738903919479,8.86135578334484,14.8942125070759,1.92136979588513,1.69077151827842,0.164437904603676,0,0,0,0,0,0.339928028092699,1.14966148080576,1.03088233644789,1.01207876807801,0,0,0,0.451725357233318,0.511946444617674,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4243763742446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,0.952927101831156,0.822724546172388,0.648473311192717,0.540031437238115,0,0,0,0,1.85803175125719,0.865615277858669,6.26048221466044,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0.19924798825107,1.9339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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=145508 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20359 | |||
|TSSclassifier=S | |||
|UniProt=G3V3F4,G3V3U2 | |||
|association_with_transcript=0bp_to_ENST00000556042,ENST00000556800,ENST00000556981_5end | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_4_at_CEP128_5end | |||
|id=chr14:81425833..81425857,- | |||
|ontology_enrichment_celltype=CL:0000542!7.75e-39!53;CL:0000051!7.75e-39!53;CL:0000838!3.43e-37!52;CL:0000945!1.38e-19!24;CL:0000826!1.38e-19!24;CL:0000236!3.61e-17!14;CL:0002087!5.02e-16!119;CL:0000084!9.16e-15!25;CL:0000827!9.16e-15!25;CL:0000738!1.00e-14!140;CL:0000624!1.27e-12!6;CL:0000080!1.59e-11!6;CL:0002031!2.55e-11!124;CL:0000988!5.42e-11!182;CL:0000037!6.18e-10!172;CL:0000566!6.18e-10!172;CL:0000791!3.49e-09!18;CL:0000789!3.49e-09!18;CL:0002420!3.49e-09!18;CL:0002419!3.49e-09!18;CL:0000790!3.49e-09!18;CL:0002032!4.41e-08!165;CL:0000837!4.41e-08!165;CL:0000898!3.80e-07!3;CL:0000817!6.22e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;7.22e-26;13!CL:0000945;4.23e-24;24!CL:0000542;7.70e-23;53!CL:0000624;1.89e-17;6!CL:0000084;8.95e-10;25!CL:0000898;9.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.10e-31,53;CL:0000051,3.10e-31,53;CL:0000838,7.96e-29,52;CL:0000945,3.51e-24,24;CL:0000826,3.51e-24,24;CL:0000236,5.36e-24,14;CL:0000624,2.46e-17,6;CL:0002087,1.48e-11,115;CL:0000738,3.29e-10,136;CL:0000084,1.05e-09,25;CL:0000827,1.05e-09,25;CL:0002031,1.06e-09,120;CL:0000988,1.70e-08,177;CL:0000037,2.36e-07,168;CL:0002032,5.92e-07,161;CL:0000837,5.92e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;7.70e-23;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.53e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.89e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.83e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.26e-16!15;UBERON:0000179!1.26e-16!15;UBERON:0000463!1.26e-16!15;UBERON:0004177!4.59e-14!7;UBERON:0007023!4.28e-12!115;UBERON:0003408!2.91e-09!10;UBERON:0002370!5.58e-09!4;UBERON:0005058!5.58e-09!4;UBERON:0009113!5.58e-09!4;UBERON:0003295!5.58e-09!4;UBERON:0005562!5.58e-09!4;UBERON:0000974!2.70e-07!10;UBERON:0001042!4.61e-07!10;UBERON:0009145!4.61e-07!10;UBERON:0002106!9.50e-07!3;UBERON:0004854!9.50e-07!3;UBERON:0009034!9.50e-07!3;UBERON:0002095!9.50e-07!3;UBERON:0004782!9.50e-07!3;UBERON:0003281!9.50e-07!3;UBERON:0009664!9.50e-07!3;UBERON:0002296!9.50e-07!3;UBERON:0005602!9.50e-07!3;UBERON:0001179!9.50e-07!3;UBERON:0006293!9.50e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.30e-14;5!UBERON:0005057;1.30e-14;5!UBERON:0002370;1.46e-10;2!UBERON:0005058;1.46e-10;2!UBERON:0009113;1.46e-10;2!UBERON:0000341;2.01e-09;2!UBERON:0002390;6.81e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.65e-15,7;UBERON:0005057,1.65e-15,7;UBERON:0000974,7.74e-11,10;UBERON:0002370,9.66e-11,4;UBERON:0005058,9.66e-11,4;UBERON:0009113,9.66e-11,4;UBERON:0003295,9.66e-11,4;UBERON:0005562,9.66e-11,4;UBERON:0009722,1.20e-09,11;UBERON:0007690,1.20e-09,11;UBERON:0000341,1.62e-09,2;UBERON:0001042,2.51e-07,10;UBERON:0009145,2.51e-07,10;UBERON:0003351,2.71e-07,6 | |||
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|short_description=p4@CEP128 | |||
}} |
Revision as of 05:46, 11 September 2013
Short description: | p4@CEP128 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CEP128_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000556042, ENST00000556800, ENST00000556981_5end |
EntrezGene: | CEP128 |
HGNC: | 20359 |
UniProt: | G3V3F4G3V3U2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.10e-31 | 53 |
common lymphoid progenitor | 3.10e-31 | 53 |
lymphoid lineage restricted progenitor cell | 7.96e-29 | 52 |
lymphocyte of B lineage | 3.51e-24 | 24 |
pro-B cell | 3.51e-24 | 24 |
B cell | 5.36e-24 | 14 |
CD4-positive, alpha-beta T cell | 2.46e-17 | 6 |
nongranular leukocyte | 1.48e-11 | 115 |
leukocyte | 3.29e-10 | 136 |
T cell | 1.05e-09 | 25 |
pro-T cell | 1.05e-09 | 25 |
hematopoietic lineage restricted progenitor cell | 1.06e-09 | 120 |
hematopoietic cell | 1.70e-08 | 177 |
hematopoietic stem cell | 2.36e-07 | 168 |
hematopoietic oligopotent progenitor cell | 5.92e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.92e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.65e-15 | 7 |
immune organ | 1.65e-15 | 7 |
neck | 7.74e-11 | 10 |
thymus | 9.66e-11 | 4 |
hemolymphoid system gland | 9.66e-11 | 4 |
thymic region | 9.66e-11 | 4 |
pharyngeal gland | 9.66e-11 | 4 |
thymus primordium | 9.66e-11 | 4 |
entire pharyngeal arch endoderm | 1.20e-09 | 11 |
early pharyngeal endoderm | 1.20e-09 | 11 |
throat | 1.62e-09 | 2 |
chordate pharynx | 2.51e-07 | 10 |
pharyngeal region of foregut | 2.51e-07 | 10 |
pharyngeal epithelium | 2.71e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.83e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.