FFCP PHASE1:Hg19::chr15:89764876..89764890,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6017|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10024|TSSclassifier=S|UniProt=P12271|association_with_transcript=31bp_to_ENST00000268125,NM_000326,uc002bnl.2_5end|coexpression_cluster_id=C40|description=CAGE_peak_2_at_RLBP1_5end|id=chr15:89764876..89764890,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;5.69e-21;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.60e-61!57;UBERON:0005068!1.60e-61!57;UBERON:0006241!1.60e-61!57;UBERON:0007135!1.60e-61!57;UBERON:0005743!2.81e-61!86;UBERON:0002616!3.07e-59!59;UBERON:0001017!6.08e-57!82;UBERON:0002780!3.45e-55!41;UBERON:0001890!3.45e-55!41;UBERON:0006240!3.45e-55!41;UBERON:0000073!7.43e-55!94;UBERON:0001016!7.43e-55!94;UBERON:0003080!9.05e-54!42;UBERON:0000955!1.27e-52!69;UBERON:0006238!1.27e-52!69;UBERON:0003075!2.24e-51!86;UBERON:0007284!2.24e-51!86;UBERON:0001893!2.26e-50!34;UBERON:0002346!8.74e-49!90;UBERON:0001869!1.23e-48!32;UBERON:0002791!6.11e-47!33;UBERON:0003056!3.76e-46!61;UBERON:0002020!1.89e-45!34;UBERON:0003528!1.89e-45!34;UBERON:0000956!7.64e-40!25;UBERON:0000203!7.64e-40!25;UBERON:0000033!8.09e-36!123;UBERON:0002619!9.98e-35!22;UBERON:0000153!8.01e-34!129;UBERON:0007811!8.01e-34!129;UBERON:0001950!4.58e-33!20;UBERON:0004121!3.07e-31!169;UBERON:0000924!2.42e-30!173;UBERON:0006601!2.42e-30!173;UBERON:0007023!8.35e-30!115;UBERON:0001871!1.21e-13!7;UBERON:0001896!1.41e-13!3;UBERON:0005290!1.41e-13!3;UBERON:0010096!1.41e-13!3;UBERON:0000025!1.93e-13!194;UBERON:0004733!2.41e-12!12;UBERON:0002028!2.41e-12!12;UBERON:0007277!2.41e-12!12;UBERON:0000200!1.26e-11!6;UBERON:0004732!2.38e-11!13;UBERON:0000369!2.32e-10!4;UBERON:0002435!2.32e-10!4;UBERON:0000204!2.32e-10!4;UBERON:0010082!2.32e-10!4;UBERON:0000064!3.74e-10!219;UBERON:0000483!8.21e-10!309;UBERON:0003076!9.32e-10!15;UBERON:0003057!9.32e-10!15;UBERON:0000119!1.21e-09!312;UBERON:0004111!1.57e-09!241;UBERON:0002298!9.19e-09!8;UBERON:0001872!1.11e-08!5;UBERON:0002021!1.44e-08!5;UBERON:0000349!1.91e-08!5;UBERON:0002420!7.33e-08!9;UBERON:0007245!7.33e-08!9;UBERON:0010009!7.33e-08!9;UBERON:0010011!7.33e-08!9;UBERON:0000454!7.33e-08!9;UBERON:0000475!7.85e-08!365;UBERON:0002308!7.89e-08!9;UBERON:0000125!7.89e-08!9;UBERON:0000477!9.23e-08!286;UBERON:0000481!4.04e-07!347|ontology_enrichment_uberon_v019=UBERON:0001905;5.69e-21;2!UBERON:0002757;5.69e-21;2!UBERON:0010134;5.69e-21;2!UBERON:0005408;5.69e-21;2!UBERON:0001899;5.69e-21;2!UBERON:0003296;3.42e-11;4!UBERON:0010133;3.42e-11;4!UBERON:0002784;3.42e-11;4!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0001872;3.22e-09;5!UBERON:0000970;5.26e-09;20!UBERON:0002104;1.27e-08;21!UBERON:0000020;5.87e-08;23!UBERON:0001032;1.15e-07;24!UBERON:0004456;1.15e-07;24!UBERON:0001894;6.04e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.96e-21,2;UBERON:0002757,6.96e-21,2;UBERON:0010134,6.96e-21,2;UBERON:0005408,6.96e-21,2;UBERON:0001899,6.96e-21,2;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0002784,3.79e-11,4;UBERON:0001872,2.97e-09,5;UBERON:0000970,1.27e-08,21;UBERON:0002104,1.27e-08,21;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000020,1.15e-07,24;UBERON:0001032,1.15e-07,24;UBERON:0004456,1.15e-07,24;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.937057782901357,0,0,0,0,0,0.306072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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6017 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10024 | |||
|TSSclassifier=S | |||
|UniProt=P12271 | |||
|association_with_transcript=31bp_to_ENST00000268125,NM_000326,uc002bnl.2_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_2_at_RLBP1_5end | |||
|id=chr15:89764876..89764890,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;5.69e-21;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.60e-61!57;UBERON:0005068!1.60e-61!57;UBERON:0006241!1.60e-61!57;UBERON:0007135!1.60e-61!57;UBERON:0005743!2.81e-61!86;UBERON:0002616!3.07e-59!59;UBERON:0001017!6.08e-57!82;UBERON:0002780!3.45e-55!41;UBERON:0001890!3.45e-55!41;UBERON:0006240!3.45e-55!41;UBERON:0000073!7.43e-55!94;UBERON:0001016!7.43e-55!94;UBERON:0003080!9.05e-54!42;UBERON:0000955!1.27e-52!69;UBERON:0006238!1.27e-52!69;UBERON:0003075!2.24e-51!86;UBERON:0007284!2.24e-51!86;UBERON:0001893!2.26e-50!34;UBERON:0002346!8.74e-49!90;UBERON:0001869!1.23e-48!32;UBERON:0002791!6.11e-47!33;UBERON:0003056!3.76e-46!61;UBERON:0002020!1.89e-45!34;UBERON:0003528!1.89e-45!34;UBERON:0000956!7.64e-40!25;UBERON:0000203!7.64e-40!25;UBERON:0000033!8.09e-36!123;UBERON:0002619!9.98e-35!22;UBERON:0000153!8.01e-34!129;UBERON:0007811!8.01e-34!129;UBERON:0001950!4.58e-33!20;UBERON:0004121!3.07e-31!169;UBERON:0000924!2.42e-30!173;UBERON:0006601!2.42e-30!173;UBERON:0007023!8.35e-30!115;UBERON:0001871!1.21e-13!7;UBERON:0001896!1.41e-13!3;UBERON:0005290!1.41e-13!3;UBERON:0010096!1.41e-13!3;UBERON:0000025!1.93e-13!194;UBERON:0004733!2.41e-12!12;UBERON:0002028!2.41e-12!12;UBERON:0007277!2.41e-12!12;UBERON:0000200!1.26e-11!6;UBERON:0004732!2.38e-11!13;UBERON:0000369!2.32e-10!4;UBERON:0002435!2.32e-10!4;UBERON:0000204!2.32e-10!4;UBERON:0010082!2.32e-10!4;UBERON:0000064!3.74e-10!219;UBERON:0000483!8.21e-10!309;UBERON:0003076!9.32e-10!15;UBERON:0003057!9.32e-10!15;UBERON:0000119!1.21e-09!312;UBERON:0004111!1.57e-09!241;UBERON:0002298!9.19e-09!8;UBERON:0001872!1.11e-08!5;UBERON:0002021!1.44e-08!5;UBERON:0000349!1.91e-08!5;UBERON:0002420!7.33e-08!9;UBERON:0007245!7.33e-08!9;UBERON:0010009!7.33e-08!9;UBERON:0010011!7.33e-08!9;UBERON:0000454!7.33e-08!9;UBERON:0000475!7.85e-08!365;UBERON:0002308!7.89e-08!9;UBERON:0000125!7.89e-08!9;UBERON:0000477!9.23e-08!286;UBERON:0000481!4.04e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.69e-21;2!UBERON:0002757;5.69e-21;2!UBERON:0010134;5.69e-21;2!UBERON:0005408;5.69e-21;2!UBERON:0001899;5.69e-21;2!UBERON:0003296;3.42e-11;4!UBERON:0010133;3.42e-11;4!UBERON:0002784;3.42e-11;4!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0001872;3.22e-09;5!UBERON:0000970;5.26e-09;20!UBERON:0002104;1.27e-08;21!UBERON:0000020;5.87e-08;23!UBERON:0001032;1.15e-07;24!UBERON:0004456;1.15e-07;24!UBERON:0001894;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.96e-21,2;UBERON:0002757,6.96e-21,2;UBERON:0010134,6.96e-21,2;UBERON:0005408,6.96e-21,2;UBERON:0001899,6.96e-21,2;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0002784,3.79e-11,4;UBERON:0001872,2.97e-09,5;UBERON:0000970,1.27e-08,21;UBERON:0002104,1.27e-08,21;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000020,1.15e-07,24;UBERON:0001032,1.15e-07,24;UBERON:0004456,1.15e-07,24;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
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|short_description=p2@RLBP1 | |||
}} |
Revision as of 08:46, 11 September 2013
Short description: | p2@RLBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RLBP1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 31bp_to_ENST00000268125, NM_000326, uc002bnl.2_5end |
EntrezGene: | RLBP1 |
HGNC: | 10024 |
UniProt: | P12271 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 6.96e-21 | 2 |
regional part of epithalamus | 6.96e-21 | 2 |
secretory circumventricular organ | 6.96e-21 | 2 |
circumventricular organ | 6.96e-21 | 2 |
epithalamus | 6.96e-21 | 2 |
gland of diencephalon | 3.79e-11 | 4 |
neuroendocrine gland | 3.79e-11 | 4 |
regional part of diencephalon | 3.79e-11 | 4 |
parietal lobe | 2.97e-09 | 5 |
eye | 1.27e-08 | 21 |
visual system | 1.27e-08 | 21 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
sense organ | 1.15e-07 | 24 |
sensory system | 1.15e-07 | 24 |
entire sense organ system | 1.15e-07 | 24 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.