FFCP PHASE1:Hg19::chr16:85589349..85589370,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3595|description=CAGE_peak_at_chr16:85589349..85589370,+|id=chr16:85589349..85589370,+|ontology_enrichment_celltype=CL:0000763!8.20e-20!112;CL:0000049!8.20e-20!112;CL:0000766!1.10e-16!76;CL:0000037!2.94e-15!172;CL:0000566!2.94e-15!172;CL:0002032!8.19e-15!165;CL:0000837!8.19e-15!165;CL:0000988!1.84e-14!182;CL:0002057!2.50e-14!42;CL:0000860!3.76e-14!45;CL:0000839!1.62e-13!70;CL:0000557!5.61e-13!71;CL:0002194!2.32e-10!63;CL:0000576!2.32e-10!63;CL:0000040!2.32e-10!63;CL:0000559!2.32e-10!63;CL:0000738!5.34e-10!140;CL:0002009!5.92e-10!65;CL:0002031!1.07e-08!124;CL:0002087!2.99e-07!119|ontology_enrichment_celltype_v019=CL:0000860;4.46e-13;33!CL:0002057;4.46e-13;33!CL:0000576;6.47e-09;48!CL:0000766;1.30e-08;69!CL:0000473;3.14e-08;39!CL:0000234;3.14e-08;39!CL:0000763;4.24e-07;100!CL:0000094;4.72e-07;8|ontology_enrichment_celltype_v019_2=CL:0000763,4.13e-21,108;CL:0000049,4.13e-21,108;CL:0000766,7.53e-18,72;CL:0000037,4.20e-15,168;CL:0000988,8.86e-15,177;CL:0002032,1.41e-14,161;CL:0000837,1.41e-14,161;CL:0000860,2.32e-14,42;CL:0002057,2.32e-14,42;CL:0000839,7.25e-14,66;CL:0000557,6.49e-13,67;CL:0000473,4.61e-11,48;CL:0000234,4.61e-11,48;CL:0002194,5.67e-10,59;CL:0000576,5.67e-10,59;CL:0000040,5.67e-10,59;CL:0000559,5.67e-10,59;CL:0000738,1.11e-09,136;CL:0002009,2.94e-09,61;CL:0002031,8.09e-08,120;CL:0000094,3.11e-07,8|ontology_enrichment_development_v019=CL:0002057;3.99e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.83e-16!102;UBERON:0003061!1.83e-16!102;UBERON:0002193!1.68e-14!112;UBERON:0002405!1.47e-11!115;UBERON:0002371!2.55e-11!80;UBERON:0001474!5.74e-11!86;UBERON:0007023!8.53e-09!115;UBERON:0004765!3.92e-07!101;UBERON:0001434!3.92e-07!101|ontology_enrichment_uberon_v019=UBERON:0000178;1.27e-07;15!UBERON:0000179;1.27e-07;15!UBERON:0000463;1.27e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.55e-16,98;UBERON:0003061,3.55e-16,98;UBERON:0002193,9.01e-13,108;UBERON:0002371,5.36e-11,76;UBERON:0001474,4.49e-10,82;UBERON:0004765,2.67e-08,90;UBERON:0002405,5.50e-08,93;UBERON:0000178,6.66e-08,15;UBERON:0000179,6.66e-08,15;UBERON:0000463,6.66e-08,15|phase1_expression=0,0.642301571672949,0.563817616383885,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0.492484232307152,0.204000691244253,0,1.14494394852423,0.547497700291537,0,1.14620108621927,0.738905305049512,1.33808328233255,5.90046415273356,7.67658796194425,4.4896675761662,0,0,0,0,0,2.34880351467878,6.64794490238253,6.61796676651468,5.20826089718044,0.223915474239924,0,0,2.90796477559129,2.26725566213286,8.24785808038575,3.25400651667958,2.05583944010913,5.88442104700697,1.7261543539329,2.56160706529101,4.25668013799453,6.20542225325913,6.45484683583826,5.41705946377367,1.12945403725563,1.63743690034707,1.34834090667051,0.918251677112708,4.17207735198922,5.75403413219137,1.64925650093358,3.98927315243264,3.83602275479425,0.870627715885752,2.8369261234557,3.73693349397345,3.26623264833766,5.21482918420201,8.03598725408932,0.605399502633369,5.89244217580104,6.64571013625857,0.845021145247767,0.637812899895131,2.93522103711726,1.12328631146495,1.20141514273205,4.66104201421532,0.285012743741249,0.39783335439818,2.00930569141097,0,0,0,0.426730222566507,0,0,0.661044872784862,0,1.70763890732835,1.17447437874188,1.52909291250092,2.64342657158052,6.1655941927969,3.68737718685108,1.96709770113833,1.96505381374582,0.616804496998528,0,0,0,1.94826728407911,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0.296573126324121,0,0,0,0.383220493601921,1.03088233644789,1.51811815211702,1.27426165729639,0,0,0.451725357233318,0.127986611154418,0,1.18388626022008,0.821127996921047,5.24177532384304,5.08136371988664,2.31719046212478,2.43806866313962,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0.175669571386252,1.11332214173056,0,0,1.29818957461873,1.39303789839414,0.26591592103773,0.476981248610684,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0,0.622422070799533,0,0.163461903113459,1.81628913173918,2.88087962239999,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,0,0.113432183160021,0.358779271377724,0,0,0.300091096084402,0,0.515281080091258,0,0.337552664482532,0.0974370051611986,1.00973509697646,0.0920498986422993,0,0.355009592516614,0,0,0,0.545492241181669,0,1.21973706129595,0.795178609928912,1.62671520017326,0.932949495138334,1.00928340350251,0,0,0,0,0,0,0.118306800039844,0,0,0,0.435758888184812,0,0.269662616320329,0,0,0,0,0.4115740113314,0,2.53510069643662,1.96565443335525,1.18157981336281,0.882926198829301,0.491953754172454,0.343135620597051,0,0,0,0,0.651616610620649,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3595 | |||
|description=CAGE_peak_at_chr16:85589349..85589370,+ | |||
|id=chr16:85589349..85589370,+ | |||
|ontology_enrichment_celltype=CL:0000763!8.20e-20!112;CL:0000049!8.20e-20!112;CL:0000766!1.10e-16!76;CL:0000037!2.94e-15!172;CL:0000566!2.94e-15!172;CL:0002032!8.19e-15!165;CL:0000837!8.19e-15!165;CL:0000988!1.84e-14!182;CL:0002057!2.50e-14!42;CL:0000860!3.76e-14!45;CL:0000839!1.62e-13!70;CL:0000557!5.61e-13!71;CL:0002194!2.32e-10!63;CL:0000576!2.32e-10!63;CL:0000040!2.32e-10!63;CL:0000559!2.32e-10!63;CL:0000738!5.34e-10!140;CL:0002009!5.92e-10!65;CL:0002031!1.07e-08!124;CL:0002087!2.99e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.46e-13;33!CL:0002057;4.46e-13;33!CL:0000576;6.47e-09;48!CL:0000766;1.30e-08;69!CL:0000473;3.14e-08;39!CL:0000234;3.14e-08;39!CL:0000763;4.24e-07;100!CL:0000094;4.72e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.13e-21,108;CL:0000049,4.13e-21,108;CL:0000766,7.53e-18,72;CL:0000037,4.20e-15,168;CL:0000988,8.86e-15,177;CL:0002032,1.41e-14,161;CL:0000837,1.41e-14,161;CL:0000860,2.32e-14,42;CL:0002057,2.32e-14,42;CL:0000839,7.25e-14,66;CL:0000557,6.49e-13,67;CL:0000473,4.61e-11,48;CL:0000234,4.61e-11,48;CL:0002194,5.67e-10,59;CL:0000576,5.67e-10,59;CL:0000040,5.67e-10,59;CL:0000559,5.67e-10,59;CL:0000738,1.11e-09,136;CL:0002009,2.94e-09,61;CL:0002031,8.09e-08,120;CL:0000094,3.11e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.99e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.83e-16!102;UBERON:0003061!1.83e-16!102;UBERON:0002193!1.68e-14!112;UBERON:0002405!1.47e-11!115;UBERON:0002371!2.55e-11!80;UBERON:0001474!5.74e-11!86;UBERON:0007023!8.53e-09!115;UBERON:0004765!3.92e-07!101;UBERON:0001434!3.92e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.27e-07;15!UBERON:0000179;1.27e-07;15!UBERON:0000463;1.27e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.55e-16,98;UBERON:0003061,3.55e-16,98;UBERON:0002193,9.01e-13,108;UBERON:0002371,5.36e-11,76;UBERON:0001474,4.49e-10,82;UBERON:0004765,2.67e-08,90;UBERON:0002405,5.50e-08,93;UBERON:0000178,6.66e-08,15;UBERON:0000179,6.66e-08,15;UBERON:0000463,6.66e-08,15 | |||
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| |||
|short_description=p@chr16:85589349..85589370,+ | |||
}} |
Revision as of 11:52, 11 September 2013
Short description: | p@chr16:85589349..85589370, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:85589349..85589370, + |
Coexpression cluster: | C3595_acute_Mast_parietal_chronic_placenta_choriocarcinoma_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.13e-21 | 108 |
common myeloid progenitor | 4.13e-21 | 108 |
myeloid leukocyte | 7.53e-18 | 72 |
hematopoietic stem cell | 4.20e-15 | 168 |
hematopoietic cell | 8.86e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.41e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-14 | 161 |
classical monocyte | 2.32e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.32e-14 | 42 |
myeloid lineage restricted progenitor cell | 7.25e-14 | 66 |
granulocyte monocyte progenitor cell | 6.49e-13 | 67 |
defensive cell | 4.61e-11 | 48 |
phagocyte | 4.61e-11 | 48 |
monopoietic cell | 5.67e-10 | 59 |
monocyte | 5.67e-10 | 59 |
monoblast | 5.67e-10 | 59 |
promonocyte | 5.67e-10 | 59 |
leukocyte | 1.11e-09 | 136 |
macrophage dendritic cell progenitor | 2.94e-09 | 61 |
hematopoietic lineage restricted progenitor cell | 8.09e-08 | 120 |
granulocyte | 3.11e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.55e-16 | 98 |
blood island | 3.55e-16 | 98 |
hemolymphoid system | 9.01e-13 | 108 |
bone marrow | 5.36e-11 | 76 |
bone element | 4.49e-10 | 82 |
skeletal element | 2.67e-08 | 90 |
immune system | 5.50e-08 | 93 |
blood | 6.66e-08 | 15 |
haemolymphatic fluid | 6.66e-08 | 15 |
organism substance | 6.66e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.