FFCP PHASE1:Hg19::chr17:46703478..46703488,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3219|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5120|TSSclassifier=S|UniProt=|association_with_transcript=125bp_to_AK056123_5end|coexpression_cluster_id=C21|description=CAGE_peak_9_at_HOXB9_5end|id=chr17:46703478..46703488,-|ontology_enrichment_celltype=CL:0000066!1.36e-13!254;CL:0000077!1.58e-07!19|ontology_enrichment_celltype_v019=CL:0002554;3.52e-11;2!CL:0002573;7.02e-08;2!CL:0002615;7.02e-08;3|ontology_enrichment_celltype_v019_2=CL:0002554,3.02e-11,2;CL:0002573,7.76e-08,2;CL:0002615,8.29e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!1.15e-23!239;DOID:162!1.21e-22!235;DOID:0050687!1.13e-19!143;DOID:305!2.94e-16!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006554!1.27e-11!44;UBERON:0002113!2.49e-11!27;UBERON:0003918!2.49e-11!27;UBERON:0005095!2.49e-11!27;UBERON:0007687!2.49e-11!27;UBERON:0001008!3.09e-11!45;UBERON:0000489!2.87e-10!32;UBERON:0000058!4.72e-09!26;UBERON:0002417!5.35e-08!61;UBERON:0000916!5.35e-08!61;UBERON:0003064!5.85e-07!37;UBERON:0006947!6.01e-07!3;UBERON:0004054!6.01e-07!3;UBERON:0000080!8.44e-07!18;UBERON:0002120!8.44e-07!18;UBERON:0004875!8.44e-07!18;UBERON:0005721!8.44e-07!18;UBERON:0005754!8.44e-07!18;UBERON:0007297!8.44e-07!18;UBERON:0005177!8.56e-07!107|ontology_enrichment_uberon_v019=UBERON:0001000;5.71e-21;1!UBERON:0005352;5.71e-21;1!UBERON:0002331;8.92e-19;10!UBERON:0000178;9.44e-13;15!UBERON:0000179;9.44e-13;15!UBERON:0000463;9.44e-13;15!UBERON:0000478;3.37e-08;24!UBERON:0006947;7.02e-08;3!UBERON:0004054;7.02e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0001000,6.31e-21,1;UBERON:0005352,6.31e-21,1;UBERON:0002331,8.92e-19,10;UBERON:0000358,8.92e-19,10;UBERON:0000307,8.92e-19,10;UBERON:0000091,8.92e-19,10;UBERON:0000087,8.92e-19,10;UBERON:0007010,8.92e-19,10;UBERON:0007806,8.92e-19,10;UBERON:0008780,8.92e-19,10;UBERON:0005728,8.92e-19,10;UBERON:0000178,9.45e-13,15;UBERON:0000179,9.45e-13,15;UBERON:0000463,9.45e-13,15;UBERON:0000478,3.37e-08,24;UBERON:0006947,7.26e-08,3;UBERON:0004054,7.26e-08,3|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.385076685522074,0.784349769176855,0,0.316654886678627,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,1.44876399560722,0.852408440419239,0,0,0,0,0,0,0,0,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0.113942055847001,0.23056390438806,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0.632994193584081,0,0,0.432777279484182,0,0,0,7.41302821701555,7.41383633679017,4.59456577824004,0,0,0,0,0,0,1.18375320854817,0,0,0,0.300646838828985,0.311064574191741,0,0,0.313932918407225,0,0.853828638089378,0.554698692052555,0,0.0979923974143777,0.261177619741208,0.873633341210151,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0.572682980829578,0.514784993585894,0.14405479798815,0.248505071130865,0,0,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0.367182116944987,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,1.18566979138767,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.303298235083296,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0.57785949122191,0,0.521988583930423,0,0.694567422971502,0.734210113519403,0.179088841081487,0,0.657852148736121,0,0.192914038270915,0,0.512483037175893,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0.690359926060101,0,0,0.80682027481408,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.460935950223117,0,0,0,0.354581522651905,0.111231401892069,0,0,0,0,0.215927591218621,0.9555033757741,0,0,0.23248285073625,0.173858272302579,0,0,0,0,0,0.236664001461131,1.02256085710989,0.846774100381858,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0.5647304101948,0,0.301925687133347,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0.357107877211315,0.705789743431384,0.320965466756673,0,0,0,0.631086248772738,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0.533636729388577,0,0.0898252021065869,0,0,0,0,0,0|short_description=p9@HOXB9}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3219 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5120 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=125bp_to_AK056123_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_9_at_HOXB9_5end | |||
|id=chr17:46703478..46703488,- | |||
|ontology_enrichment_celltype=CL:0000066!1.36e-13!254;CL:0000077!1.58e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002554;3.52e-11;2!CL:0002573;7.02e-08;2!CL:0002615;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002554,3.02e-11,2;CL:0002573,7.76e-08,2;CL:0002615,8.29e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.15e-23!239;DOID:162!1.21e-22!235;DOID:0050687!1.13e-19!143;DOID:305!2.94e-16!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!1.27e-11!44;UBERON:0002113!2.49e-11!27;UBERON:0003918!2.49e-11!27;UBERON:0005095!2.49e-11!27;UBERON:0007687!2.49e-11!27;UBERON:0001008!3.09e-11!45;UBERON:0000489!2.87e-10!32;UBERON:0000058!4.72e-09!26;UBERON:0002417!5.35e-08!61;UBERON:0000916!5.35e-08!61;UBERON:0003064!5.85e-07!37;UBERON:0006947!6.01e-07!3;UBERON:0004054!6.01e-07!3;UBERON:0000080!8.44e-07!18;UBERON:0002120!8.44e-07!18;UBERON:0004875!8.44e-07!18;UBERON:0005721!8.44e-07!18;UBERON:0005754!8.44e-07!18;UBERON:0007297!8.44e-07!18;UBERON:0005177!8.56e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;5.71e-21;1!UBERON:0005352;5.71e-21;1!UBERON:0002331;8.92e-19;10!UBERON:0000178;9.44e-13;15!UBERON:0000179;9.44e-13;15!UBERON:0000463;9.44e-13;15!UBERON:0000478;3.37e-08;24!UBERON:0006947;7.02e-08;3!UBERON:0004054;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,6.31e-21,1;UBERON:0005352,6.31e-21,1;UBERON:0002331,8.92e-19,10;UBERON:0000358,8.92e-19,10;UBERON:0000307,8.92e-19,10;UBERON:0000091,8.92e-19,10;UBERON:0000087,8.92e-19,10;UBERON:0007010,8.92e-19,10;UBERON:0007806,8.92e-19,10;UBERON:0008780,8.92e-19,10;UBERON:0005728,8.92e-19,10;UBERON:0000178,9.45e-13,15;UBERON:0000179,9.45e-13,15;UBERON:0000463,9.45e-13,15;UBERON:0000478,3.37e-08,24;UBERON:0006947,7.26e-08,3;UBERON:0004054,7.26e-08,3 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.385076685522074,0.784349769176855,0,0.316654886678627,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,1.44876399560722,0.852408440419239,0,0,0,0,0,0,0,0,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0.113942055847001,0.23056390438806,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0.632994193584081,0,0,0.432777279484182,0,0,0,7.41302821701555,7.41383633679017,4.59456577824004,0,0,0,0,0,0,1.18375320854817,0,0,0,0.300646838828985,0.311064574191741,0,0,0.313932918407225,0,0.853828638089378,0.554698692052555,0,0.0979923974143777,0.261177619741208,0.873633341210151,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0.572682980829578,0.514784993585894,0.14405479798815,0.248505071130865,0,0,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0.367182116944987,0.211200673038813,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,1.18566979138767,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.303298235083296,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0.57785949122191,0,0.521988583930423,0,0.694567422971502,0.734210113519403,0.179088841081487,0,0.657852148736121,0,0.192914038270915,0,0.512483037175893,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0.690359926060101,0,0,0.80682027481408,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.460935950223117,0,0,0,0.354581522651905,0.111231401892069,0,0,0,0,0.215927591218621,0.9555033757741,0,0,0.23248285073625,0.173858272302579,0,0,0,0,0,0.236664001461131,1.02256085710989,0.846774100381858,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0.5647304101948,0,0.301925687133347,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0.357107877211315,0.705789743431384,0.320965466756673,0,0,0,0.631086248772738,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0.533636729388577,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p9@HOXB9 | |||
}} |
Revision as of 14:17, 11 September 2013
Short description: | p9@HOXB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_HOXB9_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 125bp_to_AK056123_5end |
EntrezGene: | HOXB9 |
HGNC: | 5120 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 3.02e-11 | 2 |
Schwann cell | 7.76e-08 | 2 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 6.31e-21 | 1 |
spermatic cord | 6.31e-21 | 1 |
umbilical cord | 8.92e-19 | 10 |
blastocyst | 8.92e-19 | 10 |
blastula | 8.92e-19 | 10 |
bilaminar disc | 8.92e-19 | 10 |
inner cell mass | 8.92e-19 | 10 |
cleaving embryo | 8.92e-19 | 10 |
connecting stalk | 8.92e-19 | 10 |
inner cell mass derived epiblast | 8.92e-19 | 10 |
extraembryonic mesoderm | 8.92e-19 | 10 |
blood | 9.45e-13 | 15 |
haemolymphatic fluid | 9.45e-13 | 15 |
organism substance | 9.45e-13 | 15 |
extraembryonic structure | 3.37e-08 | 24 |
male genital duct | 7.26e-08 | 3 |
internal male genitalia | 7.26e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.