FFCP PHASE1:Hg19::chr19:39108552..39108565,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11184|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6863|TSSclassifier=S|UniProt=Q92918|association_with_transcript=77bp_to_ENST00000221409,ENST00000396857,NM_001042600,NM_007181,uc002oix.1,uc002oiy.1_5end|coexpression_cluster_id=C36|description=CAGE_peak_3_at_MAP4K1_5end|id=chr19:39108552..39108565,-|ontology_enrichment_celltype=CL:0000988!1.42e-47!182;CL:0000037!1.71e-47!172;CL:0000566!1.71e-47!172;CL:0000738!5.23e-46!140;CL:0002087!2.72e-45!119;CL:0002032!6.02e-45!165;CL:0000837!6.02e-45!165;CL:0000542!1.27e-43!53;CL:0000051!1.27e-43!53;CL:0002031!9.77e-43!124;CL:0000838!2.69e-42!52;CL:0000945!6.59e-22!24;CL:0000826!6.59e-22!24;CL:0000084!3.99e-18!25;CL:0000827!3.99e-18!25;CL:0000791!1.09e-14!18;CL:0000789!1.09e-14!18;CL:0002420!1.09e-14!18;CL:0002419!1.09e-14!18;CL:0000790!1.09e-14!18;CL:0000763!2.20e-11!112;CL:0000049!2.20e-11!112;CL:0000766!3.63e-10!76;CL:0002057!2.07e-09!42;CL:0000839!2.14e-09!70;CL:0000236!2.50e-09!14;CL:0000557!3.84e-09!71;CL:0000625!1.95e-08!11;CL:0000860!2.33e-08!45;CL:0002194!2.54e-08!63;CL:0000576!2.54e-08!63;CL:0000040!2.54e-08!63;CL:0000559!2.54e-08!63;CL:0000134!3.31e-08!358;CL:0002393!7.03e-08!9;CL:0002397!7.03e-08!9;CL:0002009!7.78e-08!65;CL:0002320!1.30e-07!365|ontology_enrichment_celltype_v019=CL:0000945;3.47e-37;24!CL:0000542;1.31e-24;53!CL:0000784;5.18e-10;3!CL:0002087;3.34e-09;104!CL:0000236;4.07e-08;13!CL:0000084;2.08e-07;25|ontology_enrichment_celltype_v019_2=CL:0000542,5.22e-43,53;CL:0000051,5.22e-43,53;CL:0000838,1.56e-40,52;CL:0000945,3.16e-37,24;CL:0000826,3.16e-37,24;CL:0002087,1.90e-26,115;CL:0000738,1.57e-25,136;CL:0000988,3.16e-24,177;CL:0000037,1.57e-21,168;CL:0002031,3.86e-20,120;CL:0002032,1.25e-17,161;CL:0000837,1.25e-17,161;CL:0000236,3.28e-10,14;CL:0000784,4.03e-10,3;CL:0000785,1.61e-07,2;CL:0000955,1.61e-07,2;CL:0000818,1.61e-07,2;CL:0000954,1.61e-07,2;CL:0000816,1.61e-07,2;CL:0000084,2.40e-07,25;CL:0000827,2.40e-07,25|ontology_enrichment_development_v019=CL:0000051;1.31e-24;53!CL:0000954;1.60e-07;2|ontology_enrichment_disease=DOID:2531!2.26e-16!51;DOID:0060083!2.26e-16!51;DOID:1240!7.82e-11!39;DOID:0060058!3.44e-09!10|ontology_enrichment_disease_v019=DOID:0060058;2.16e-21;10!DOID:2531;7.08e-07;51!DOID:0060083;7.08e-07;51|ontology_enrichment_disease_v019_2=DOID:0060058,2.13e-21,10;DOID:2531,1.05e-11,51;DOID:0060083,1.05e-11,51|ontology_enrichment_uberon=UBERON:0002390!1.97e-18!102;UBERON:0003061!1.97e-18!102;UBERON:0002193!3.45e-17!112;UBERON:0000178!1.70e-09!15;UBERON:0000179!1.70e-09!15;UBERON:0000463!1.70e-09!15;UBERON:0004177!1.44e-08!7;UBERON:0002371!5.66e-08!80;UBERON:0002405!1.56e-07!115;UBERON:0001474!7.75e-07!86;UBERON:0002384!8.02e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;3.63e-16;15!UBERON:0000179;3.63e-16;15!UBERON:0000463;3.63e-16;15!UBERON:0002390;5.00e-10;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.50e-16,15;UBERON:0000179,4.50e-16,15;UBERON:0000463,4.50e-16,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8109492645493,14.8602066904402,17.0802395450684,0.393364276848904,1.15148819429164,0.154816123316076,0,0,0,2.16908161624845,3.83856927716038,0,0,0.601633342410425,0.217010870715852,0,0.647787332037959,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0.768482119587302,0.47296445977717,0,0,0,0,0.545812300115692,0,0,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.434377689410233,1.21079900526674,0.736555271975129,0,1.69004229049553,0.850417199860174,0.419317291016752,0.112328631146495,0.750884464207532,0.16072558669708,1.14005097496499,0.59675003159727,0.91332076882317,1.75996244461323,0.546138611262131,0,0,1.20118796110804,1.14950487990897,1.32208974556972,0,1.70763890732835,0.587237189370939,0.382273228125229,0,0.560508562981536,0.790152254325231,0.393419540227666,0.786021525498329,0.411202997999018,3.34372990781356,0.32592226663359,0.473447805734733,1.94826728407911,2.1167986808183,0.883817722424512,0.664601683750863,0.541607727530031,3.20228299314188,3.25148368899696,1.31550323682941,1.38175008892924,1.44901542867526,0.296573126324121,0.535081656179426,0,2.60611488204402,0.383220493601921,0,2.02415753615602,0,0.651083453856419,0.950452044448374,0.301150238155546,1.02389288923535,1.24930726552346,0.710331756132051,0,1.41124720257313,2.94184215361858,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0,1.90792499444274,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.509704647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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11184 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6863 | |||
|TSSclassifier=S | |||
|UniProt=Q92918 | |||
|association_with_transcript=77bp_to_ENST00000221409,ENST00000396857,NM_001042600,NM_007181,uc002oix.1,uc002oiy.1_5end | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_3_at_MAP4K1_5end | |||
|id=chr19:39108552..39108565,- | |||
|ontology_enrichment_celltype=CL:0000988!1.42e-47!182;CL:0000037!1.71e-47!172;CL:0000566!1.71e-47!172;CL:0000738!5.23e-46!140;CL:0002087!2.72e-45!119;CL:0002032!6.02e-45!165;CL:0000837!6.02e-45!165;CL:0000542!1.27e-43!53;CL:0000051!1.27e-43!53;CL:0002031!9.77e-43!124;CL:0000838!2.69e-42!52;CL:0000945!6.59e-22!24;CL:0000826!6.59e-22!24;CL:0000084!3.99e-18!25;CL:0000827!3.99e-18!25;CL:0000791!1.09e-14!18;CL:0000789!1.09e-14!18;CL:0002420!1.09e-14!18;CL:0002419!1.09e-14!18;CL:0000790!1.09e-14!18;CL:0000763!2.20e-11!112;CL:0000049!2.20e-11!112;CL:0000766!3.63e-10!76;CL:0002057!2.07e-09!42;CL:0000839!2.14e-09!70;CL:0000236!2.50e-09!14;CL:0000557!3.84e-09!71;CL:0000625!1.95e-08!11;CL:0000860!2.33e-08!45;CL:0002194!2.54e-08!63;CL:0000576!2.54e-08!63;CL:0000040!2.54e-08!63;CL:0000559!2.54e-08!63;CL:0000134!3.31e-08!358;CL:0002393!7.03e-08!9;CL:0002397!7.03e-08!9;CL:0002009!7.78e-08!65;CL:0002320!1.30e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.47e-37;24!CL:0000542;1.31e-24;53!CL:0000784;5.18e-10;3!CL:0002087;3.34e-09;104!CL:0000236;4.07e-08;13!CL:0000084;2.08e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.22e-43,53;CL:0000051,5.22e-43,53;CL:0000838,1.56e-40,52;CL:0000945,3.16e-37,24;CL:0000826,3.16e-37,24;CL:0002087,1.90e-26,115;CL:0000738,1.57e-25,136;CL:0000988,3.16e-24,177;CL:0000037,1.57e-21,168;CL:0002031,3.86e-20,120;CL:0002032,1.25e-17,161;CL:0000837,1.25e-17,161;CL:0000236,3.28e-10,14;CL:0000784,4.03e-10,3;CL:0000785,1.61e-07,2;CL:0000955,1.61e-07,2;CL:0000818,1.61e-07,2;CL:0000954,1.61e-07,2;CL:0000816,1.61e-07,2;CL:0000084,2.40e-07,25;CL:0000827,2.40e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;1.31e-24;53!CL:0000954;1.60e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!2.26e-16!51;DOID:0060083!2.26e-16!51;DOID:1240!7.82e-11!39;DOID:0060058!3.44e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.16e-21;10!DOID:2531;7.08e-07;51!DOID:0060083;7.08e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.13e-21,10;DOID:2531,1.05e-11,51;DOID:0060083,1.05e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.97e-18!102;UBERON:0003061!1.97e-18!102;UBERON:0002193!3.45e-17!112;UBERON:0000178!1.70e-09!15;UBERON:0000179!1.70e-09!15;UBERON:0000463!1.70e-09!15;UBERON:0004177!1.44e-08!7;UBERON:0002371!5.66e-08!80;UBERON:0002405!1.56e-07!115;UBERON:0001474!7.75e-07!86;UBERON:0002384!8.02e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.63e-16;15!UBERON:0000179;3.63e-16;15!UBERON:0000463;3.63e-16;15!UBERON:0002390;5.00e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.50e-16,15;UBERON:0000179,4.50e-16,15;UBERON:0000463,4.50e-16,15 | |||
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|short_description=p3@MAP4K1 | |||
}} |
Revision as of 20:28, 11 September 2013
Short description: | p3@MAP4K1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MAP4K1_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 77bp_to_ENST00000221409, ENST00000396857, NM_001042600, NM_007181, uc002oix.1, uc002oiy.1_5end |
EntrezGene: | MAP4K1 |
HGNC: | 6863 |
UniProt: | Q92918 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.22e-43 | 53 |
common lymphoid progenitor | 5.22e-43 | 53 |
lymphoid lineage restricted progenitor cell | 1.56e-40 | 52 |
lymphocyte of B lineage | 3.16e-37 | 24 |
pro-B cell | 3.16e-37 | 24 |
nongranular leukocyte | 1.90e-26 | 115 |
leukocyte | 1.57e-25 | 136 |
hematopoietic cell | 3.16e-24 | 177 |
hematopoietic stem cell | 1.57e-21 | 168 |
hematopoietic lineage restricted progenitor cell | 3.86e-20 | 120 |
hematopoietic oligopotent progenitor cell | 1.25e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.25e-17 | 161 |
B cell | 3.28e-10 | 14 |
plasmacytoid dendritic cell | 4.03e-10 | 3 |
mature B cell | 1.61e-07 | 2 |
pre-B-II cell | 1.61e-07 | 2 |
transitional stage B cell | 1.61e-07 | 2 |
small pre-B-II cell | 1.61e-07 | 2 |
immature B cell | 1.61e-07 | 2 |
T cell | 2.40e-07 | 25 |
pro-T cell | 2.40e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
blood | 4.50e-16 | 15 |
haemolymphatic fluid | 4.50e-16 | 15 |
organism substance | 4.50e-16 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.13e-21 | 10 |
hematologic cancer | 1.05e-11 | 51 |
immune system cancer | 1.05e-11 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.