FFCP PHASE1:Hg19::chr19:45257891..45257908,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=602|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=998|TSSclassifier=N|UniProt=|association_with_transcript=-497bp_to_ENST00000473468_5end|coexpression_cluster_id=C2|description=CAGE_peak_17_at_BCL3_5end|id=chr19:45257891..45257908,+|ontology_enrichment_celltype=CL:0000738!7.18e-40!140;CL:0002057!1.90e-37!42;CL:0000860!2.53e-37!45;CL:0000766!8.06e-36!76;CL:0000037!1.00e-33!172;CL:0000566!1.00e-33!172;CL:0000988!1.65e-33!182;CL:0002032!1.44e-31!165;CL:0000837!1.44e-31!165;CL:0002087!2.11e-29!119;CL:0002009!2.29e-29!65;CL:0000763!4.05e-29!112;CL:0000049!4.05e-29!112;CL:0000557!2.03e-28!71;CL:0002031!2.03e-27!124;CL:0002194!2.24e-27!63;CL:0000576!2.24e-27!63;CL:0000040!2.24e-27!63;CL:0000559!2.24e-27!63;CL:0000839!6.98e-26!70;CL:0000094!1.25e-11!8;CL:0000081!1.32e-09!11;CL:0000134!2.89e-08!358;CL:0000080!1.15e-07!6;CL:0002320!1.20e-07!365|ontology_enrichment_celltype_v019=CL:0000094;7.91e-38;8!CL:0000860;2.34e-31;33!CL:0002057;2.34e-31;33!CL:0000081;3.60e-27;11!CL:0000473;1.07e-23;39!CL:0000234;1.07e-23;39!CL:0000766;1.08e-17;69!CL:0000576;4.96e-16;48!CL:0000775;5.62e-16;3!CL:0000767;4.39e-14;3!CL:0000763;9.31e-14;100!CL:0000771;2.44e-11;2|ontology_enrichment_celltype_v019_2=CL:0000766,8.91e-45,72;CL:0000094,9.40e-38,8;CL:0000763,1.48e-32,108;CL:0000049,1.48e-32,108;CL:0000860,1.66e-32,42;CL:0002057,1.66e-32,42;CL:0000473,3.28e-31,48;CL:0000234,3.28e-31,48;CL:0000738,1.60e-28,136;CL:0000081,4.08e-27,11;CL:0002009,7.04e-26,61;CL:0000557,1.14e-25,67;CL:0002194,4.46e-24,59;CL:0000576,4.46e-24,59;CL:0000040,4.46e-24,59;CL:0000559,4.46e-24,59;CL:0000839,1.76e-23,66;CL:0000037,1.88e-23,168;CL:0002032,5.52e-23,161;CL:0000837,5.52e-23,161;CL:0000988,6.65e-22,177;CL:0000775,5.63e-16,3;CL:0002031,3.28e-15,120;CL:0002087,1.38e-14,115;CL:0000767,5.16e-14,3;CL:0000771,2.45e-11,2;CL:0000134,1.98e-07,354;CL:0002320,3.76e-07,361|ontology_enrichment_development_v019=CL:0002057;6.35e-22;42!CL:0000049;1.80e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.18e-38!102;UBERON:0003061!3.18e-38!102;UBERON:0002193!3.38e-35!112;UBERON:0002371!4.09e-26!80;UBERON:0001474!2.36e-24!86;UBERON:0004765!4.65e-19!101;UBERON:0001434!4.65e-19!101;UBERON:0002405!8.74e-19!115;UBERON:0000178!3.82e-13!15;UBERON:0000179!3.82e-13!15;UBERON:0000463!3.82e-13!15;UBERON:0003081!6.84e-13!216;UBERON:0002204!6.69e-09!167;UBERON:0002384!3.74e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;2.09e-14;15!UBERON:0000179;2.09e-14;15!UBERON:0000463;2.09e-14;15!UBERON:0002390;1.51e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.11e-33,98;UBERON:0003061,2.11e-33,98;UBERON:0002193,9.71e-30,108;UBERON:0002371,2.18e-24,76;UBERON:0001474,2.96e-22,82;UBERON:0004765,7.53e-20,90;UBERON:0002405,4.70e-19,93;UBERON:0001434,2.21e-17,100;UBERON:0000178,1.77e-14,15;UBERON:0000179,1.77e-14,15;UBERON:0000463,1.77e-14,15;UBERON:0003081,4.81e-14,203;UBERON:0002204,1.72e-08,167;UBERON:0002384,9.03e-07,371;UBERON:0000926,9.04e-07,315;UBERON:0004120,9.04e-07,315;UBERON:0006603,9.04e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.246301768349837,0.393553906568396,1.18009283054671,1.15148819429164,1.39334510984468,0,0.30120591877825,0,0.0774672005803016,0,0.587200878669695,3.87796785972314,3.00816671205213,0.434021741431704,0,0,0,0.436194716338694,1.13362783106643,0.727752183563449,0.464858073811369,0.822335776043652,0.929119112685311,4.89077066947656,5.37937483711111,9.93225365532058,1.03423704220986,0,0,0.564727018627814,0.272906150057846,0.674170453335254,1.83650335422542,0.320929027076094,2.55734850319616,3.95821560224059,2.19410023383795,3.83602275479425,0.870627715885752,1.70215567407342,1.24564449799115,9.79869794501299,6.25779502104242,8.90474263290978,1.21079900526674,0.368277635987565,0.316462387440884,0.422510572623884,0.850417199860174,0.628975936525128,0.786300418025466,0.750884464207532,0.48217676009124,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,2.24203425192614,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.512365278902701,0.260118695119756,0.164437904603676,0.552700035571697,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0.132957960518865,0.715471872916026,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3560834872127,38.7780264148325,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0.435758888184812,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.1417750972423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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=602 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=998 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-497bp_to_ENST00000473468_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_17_at_BCL3_5end | |||
|id=chr19:45257891..45257908,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.18e-40!140;CL:0002057!1.90e-37!42;CL:0000860!2.53e-37!45;CL:0000766!8.06e-36!76;CL:0000037!1.00e-33!172;CL:0000566!1.00e-33!172;CL:0000988!1.65e-33!182;CL:0002032!1.44e-31!165;CL:0000837!1.44e-31!165;CL:0002087!2.11e-29!119;CL:0002009!2.29e-29!65;CL:0000763!4.05e-29!112;CL:0000049!4.05e-29!112;CL:0000557!2.03e-28!71;CL:0002031!2.03e-27!124;CL:0002194!2.24e-27!63;CL:0000576!2.24e-27!63;CL:0000040!2.24e-27!63;CL:0000559!2.24e-27!63;CL:0000839!6.98e-26!70;CL:0000094!1.25e-11!8;CL:0000081!1.32e-09!11;CL:0000134!2.89e-08!358;CL:0000080!1.15e-07!6;CL:0002320!1.20e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000094;7.91e-38;8!CL:0000860;2.34e-31;33!CL:0002057;2.34e-31;33!CL:0000081;3.60e-27;11!CL:0000473;1.07e-23;39!CL:0000234;1.07e-23;39!CL:0000766;1.08e-17;69!CL:0000576;4.96e-16;48!CL:0000775;5.62e-16;3!CL:0000767;4.39e-14;3!CL:0000763;9.31e-14;100!CL:0000771;2.44e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.91e-45,72;CL:0000094,9.40e-38,8;CL:0000763,1.48e-32,108;CL:0000049,1.48e-32,108;CL:0000860,1.66e-32,42;CL:0002057,1.66e-32,42;CL:0000473,3.28e-31,48;CL:0000234,3.28e-31,48;CL:0000738,1.60e-28,136;CL:0000081,4.08e-27,11;CL:0002009,7.04e-26,61;CL:0000557,1.14e-25,67;CL:0002194,4.46e-24,59;CL:0000576,4.46e-24,59;CL:0000040,4.46e-24,59;CL:0000559,4.46e-24,59;CL:0000839,1.76e-23,66;CL:0000037,1.88e-23,168;CL:0002032,5.52e-23,161;CL:0000837,5.52e-23,161;CL:0000988,6.65e-22,177;CL:0000775,5.63e-16,3;CL:0002031,3.28e-15,120;CL:0002087,1.38e-14,115;CL:0000767,5.16e-14,3;CL:0000771,2.45e-11,2;CL:0000134,1.98e-07,354;CL:0002320,3.76e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.35e-22;42!CL:0000049;1.80e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.18e-38!102;UBERON:0003061!3.18e-38!102;UBERON:0002193!3.38e-35!112;UBERON:0002371!4.09e-26!80;UBERON:0001474!2.36e-24!86;UBERON:0004765!4.65e-19!101;UBERON:0001434!4.65e-19!101;UBERON:0002405!8.74e-19!115;UBERON:0000178!3.82e-13!15;UBERON:0000179!3.82e-13!15;UBERON:0000463!3.82e-13!15;UBERON:0003081!6.84e-13!216;UBERON:0002204!6.69e-09!167;UBERON:0002384!3.74e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.09e-14;15!UBERON:0000179;2.09e-14;15!UBERON:0000463;2.09e-14;15!UBERON:0002390;1.51e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.11e-33,98;UBERON:0003061,2.11e-33,98;UBERON:0002193,9.71e-30,108;UBERON:0002371,2.18e-24,76;UBERON:0001474,2.96e-22,82;UBERON:0004765,7.53e-20,90;UBERON:0002405,4.70e-19,93;UBERON:0001434,2.21e-17,100;UBERON:0000178,1.77e-14,15;UBERON:0000179,1.77e-14,15;UBERON:0000463,1.77e-14,15;UBERON:0003081,4.81e-14,203;UBERON:0002204,1.72e-08,167;UBERON:0002384,9.03e-07,371;UBERON:0000926,9.04e-07,315;UBERON:0004120,9.04e-07,315;UBERON:0006603,9.04e-07,315 | |||
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|short_description=p17@BCL3 | |||
}} |
Revision as of 21:07, 11 September 2013
Short description: | p17@BCL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_BCL3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -497bp_to_ENST00000473468_5end |
EntrezGene: | BCL3 |
HGNC: | 998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.91e-45 | 72 |
granulocyte | 9.40e-38 | 8 |
myeloid cell | 1.48e-32 | 108 |
common myeloid progenitor | 1.48e-32 | 108 |
classical monocyte | 1.66e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-32 | 42 |
defensive cell | 3.28e-31 | 48 |
phagocyte | 3.28e-31 | 48 |
leukocyte | 1.60e-28 | 136 |
blood cell | 4.08e-27 | 11 |
macrophage dendritic cell progenitor | 7.04e-26 | 61 |
granulocyte monocyte progenitor cell | 1.14e-25 | 67 |
monopoietic cell | 4.46e-24 | 59 |
monocyte | 4.46e-24 | 59 |
monoblast | 4.46e-24 | 59 |
promonocyte | 4.46e-24 | 59 |
myeloid lineage restricted progenitor cell | 1.76e-23 | 66 |
hematopoietic stem cell | 1.88e-23 | 168 |
hematopoietic oligopotent progenitor cell | 5.52e-23 | 161 |
hematopoietic multipotent progenitor cell | 5.52e-23 | 161 |
hematopoietic cell | 6.65e-22 | 177 |
neutrophil | 5.63e-16 | 3 |
hematopoietic lineage restricted progenitor cell | 3.28e-15 | 120 |
nongranular leukocyte | 1.38e-14 | 115 |
basophil | 5.16e-14 | 3 |
eosinophil | 2.45e-11 | 2 |
mesenchymal cell | 1.98e-07 | 354 |
connective tissue cell | 3.76e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.11e-33 | 98 |
blood island | 2.11e-33 | 98 |
hemolymphoid system | 9.71e-30 | 108 |
bone marrow | 2.18e-24 | 76 |
bone element | 2.96e-22 | 82 |
skeletal element | 7.53e-20 | 90 |
immune system | 4.70e-19 | 93 |
skeletal system | 2.21e-17 | 100 |
blood | 1.77e-14 | 15 |
haemolymphatic fluid | 1.77e-14 | 15 |
organism substance | 1.77e-14 | 15 |
lateral plate mesoderm | 4.81e-14 | 203 |
musculoskeletal system | 1.72e-08 | 167 |
connective tissue | 9.03e-07 | 371 |
mesoderm | 9.04e-07 | 315 |
mesoderm-derived structure | 9.04e-07 | 315 |
presumptive mesoderm | 9.04e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.