FFCP PHASE1:Hg19::chr1:32398355..32398370,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C580|description=CAGE_peak_at_chr1:32398355..32398370,-|id=chr1:32398355..32398370,-|ontology_enrichment_celltype=CL:0000838!4.69e-14!52;CL:0000542!1.00e-13!53;CL:0000051!1.00e-13!53;CL:0002087!9.53e-10!119;CL:0000738!1.30e-09!140;CL:0000037!1.57e-09!172;CL:0000566!1.57e-09!172;CL:0000945!3.24e-09!24;CL:0000826!3.24e-09!24;CL:0000988!1.09e-08!182;CL:0002032!3.13e-08!165;CL:0000837!3.13e-08!165;CL:0002031!3.91e-08!124|ontology_enrichment_celltype_v019=CL:0002127;1.11e-25;1!CL:0000911;1.11e-25;1!CL:0000814;1.11e-25;1!CL:0000084;1.26e-09;25|ontology_enrichment_celltype_v019_2=CL:0002127,1.26e-25,1;CL:0000914,1.26e-25,1;CL:0000911,1.26e-25,1;CL:0000814,1.26e-25,1;CL:0002042,1.26e-25,1;CL:0002039,1.26e-25,1;CL:0002040,1.26e-25,1;CL:0002041,1.26e-25,1;CL:0000893,1.55e-13,2;CL:0002489,1.55e-13,2;CL:0000809,1.55e-13,2;CL:0000808,1.55e-13,2;CL:0000894,1.55e-13,2;CL:0000806,1.55e-13,2;CL:0000807,1.55e-13,2;CL:0000805,1.55e-13,2;CL:0002425,1.55e-13,2;CL:0000084,1.28e-09,25;CL:0000827,1.28e-09,25|ontology_enrichment_development_v019=CL:0002425;1.46e-13;2!UBERON:0006965;1.46e-13;2|ontology_enrichment_disease=DOID:0060058!4.29e-10!10;DOID:2531!3.71e-09!51;DOID:0060083!3.71e-09!51|ontology_enrichment_disease_v019=DOID:2531;9.72e-08;51!DOID:0060083;9.72e-08;51|ontology_enrichment_disease_v019_2=DOID:2531,3.27e-08,51;DOID:0060083,3.27e-08,51|ontology_enrichment_uberon=UBERON:0004177!6.61e-21!7;UBERON:0002106!1.99e-12!3;UBERON:0004854!1.99e-12!3;UBERON:0009034!1.99e-12!3;UBERON:0002095!1.99e-12!3;UBERON:0004782!1.99e-12!3;UBERON:0003281!1.99e-12!3;UBERON:0009664!1.99e-12!3;UBERON:0002296!1.99e-12!3;UBERON:0005602!1.99e-12!3;UBERON:0001179!1.99e-12!3;UBERON:0006293!1.99e-12!3;UBERON:0002370!1.74e-10!4;UBERON:0005058!1.74e-10!4;UBERON:0009113!1.74e-10!4;UBERON:0003295!1.74e-10!4;UBERON:0005562!1.74e-10!4;UBERON:0003351!4.15e-07!6;UBERON:0000974!5.18e-07!10;UBERON:0001042!7.51e-07!10;UBERON:0009145!7.51e-07!10|ontology_enrichment_uberon_v019=UBERON:0002370;1.46e-50;2!UBERON:0005058;1.46e-50;2!UBERON:0009113;1.46e-50;2!UBERON:0004177;6.01e-21;5!UBERON:0005057;6.01e-21;5|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.53e-56,4;UBERON:0005058,5.53e-56,4;UBERON:0009113,5.53e-56,4;UBERON:0003295,5.53e-56,4;UBERON:0005562,5.53e-56,4;UBERON:0003351,1.18e-37,6;UBERON:0004177,2.08e-32,7;UBERON:0005057,2.08e-32,7;UBERON:0000974,5.96e-23,10;UBERON:0003408,5.96e-23,10;UBERON:0001042,5.96e-23,10;UBERON:0009145,5.96e-23,10;UBERON:0006562,6.11e-21,11;UBERON:0009722,6.11e-21,11;UBERON:0007690,6.11e-21,11;UBERON:0008814,4.27e-13,18;UBERON:0001557,1.91e-12,19;UBERON:0004807,1.17e-08,28;UBERON:0000077,2.21e-08,29;UBERON:0002368,4.78e-07,35|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.246301768349837,0.0787107813136792,0,0.383829398097213,0,0,0,0,0.92960640696362,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,4.41079428760168,0.797131363644112,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3070617474031,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.069157252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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C580 | |||
|description=CAGE_peak_at_chr1:32398355..32398370,- | |||
|id=chr1:32398355..32398370,- | |||
|ontology_enrichment_celltype=CL:0000838!4.69e-14!52;CL:0000542!1.00e-13!53;CL:0000051!1.00e-13!53;CL:0002087!9.53e-10!119;CL:0000738!1.30e-09!140;CL:0000037!1.57e-09!172;CL:0000566!1.57e-09!172;CL:0000945!3.24e-09!24;CL:0000826!3.24e-09!24;CL:0000988!1.09e-08!182;CL:0002032!3.13e-08!165;CL:0000837!3.13e-08!165;CL:0002031!3.91e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.11e-25;1!CL:0000911;1.11e-25;1!CL:0000814;1.11e-25;1!CL:0000084;1.26e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.26e-25,1;CL:0000914,1.26e-25,1;CL:0000911,1.26e-25,1;CL:0000814,1.26e-25,1;CL:0002042,1.26e-25,1;CL:0002039,1.26e-25,1;CL:0002040,1.26e-25,1;CL:0002041,1.26e-25,1;CL:0000893,1.55e-13,2;CL:0002489,1.55e-13,2;CL:0000809,1.55e-13,2;CL:0000808,1.55e-13,2;CL:0000894,1.55e-13,2;CL:0000806,1.55e-13,2;CL:0000807,1.55e-13,2;CL:0000805,1.55e-13,2;CL:0002425,1.55e-13,2;CL:0000084,1.28e-09,25;CL:0000827,1.28e-09,25 | |||
|ontology_enrichment_development_v019=CL:0002425;1.46e-13;2!UBERON:0006965;1.46e-13;2 | |||
|ontology_enrichment_disease=DOID:0060058!4.29e-10!10;DOID:2531!3.71e-09!51;DOID:0060083!3.71e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:2531;9.72e-08;51!DOID:0060083;9.72e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.27e-08,51;DOID:0060083,3.27e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.61e-21!7;UBERON:0002106!1.99e-12!3;UBERON:0004854!1.99e-12!3;UBERON:0009034!1.99e-12!3;UBERON:0002095!1.99e-12!3;UBERON:0004782!1.99e-12!3;UBERON:0003281!1.99e-12!3;UBERON:0009664!1.99e-12!3;UBERON:0002296!1.99e-12!3;UBERON:0005602!1.99e-12!3;UBERON:0001179!1.99e-12!3;UBERON:0006293!1.99e-12!3;UBERON:0002370!1.74e-10!4;UBERON:0005058!1.74e-10!4;UBERON:0009113!1.74e-10!4;UBERON:0003295!1.74e-10!4;UBERON:0005562!1.74e-10!4;UBERON:0003351!4.15e-07!6;UBERON:0000974!5.18e-07!10;UBERON:0001042!7.51e-07!10;UBERON:0009145!7.51e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.46e-50;2!UBERON:0005058;1.46e-50;2!UBERON:0009113;1.46e-50;2!UBERON:0004177;6.01e-21;5!UBERON:0005057;6.01e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.53e-56,4;UBERON:0005058,5.53e-56,4;UBERON:0009113,5.53e-56,4;UBERON:0003295,5.53e-56,4;UBERON:0005562,5.53e-56,4;UBERON:0003351,1.18e-37,6;UBERON:0004177,2.08e-32,7;UBERON:0005057,2.08e-32,7;UBERON:0000974,5.96e-23,10;UBERON:0003408,5.96e-23,10;UBERON:0001042,5.96e-23,10;UBERON:0009145,5.96e-23,10;UBERON:0006562,6.11e-21,11;UBERON:0009722,6.11e-21,11;UBERON:0007690,6.11e-21,11;UBERON:0008814,4.27e-13,18;UBERON:0001557,1.91e-12,19;UBERON:0004807,1.17e-08,28;UBERON:0000077,2.21e-08,29;UBERON:0002368,4.78e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.246301768349837,0.0787107813136792,0,0.383829398097213,0,0,0,0,0.92960640696362,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,4.41079428760168,0.797131363644112,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3070617474031,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0.799529247399431,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,8.07361372950076,6.70406914395265,0,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,1.40891655513718,0 | |||
|short_description=p@chr1:32398355..32398370,- | |||
}} |
Revision as of 05:16, 12 September 2013
Short description: | p@chr1:32398355..32398370, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:32398355..32398370, - |
Coexpression cluster: | C580_chronic_thymus_Hodgkin_acute_iPS_vein_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.26e-25 | 1 |
immature NK T cell | 1.26e-25 | 1 |
effector T cell | 1.26e-25 | 1 |
mature NK T cell | 1.26e-25 | 1 |
immature NK T cell stage IV | 1.26e-25 | 1 |
immature NK T cell stage I | 1.26e-25 | 1 |
immature NK T cell stage II | 1.26e-25 | 1 |
immature NK T cell stage III | 1.26e-25 | 1 |
thymocyte | 1.55e-13 | 2 |
double negative thymocyte | 1.55e-13 | 2 |
double-positive, alpha-beta thymocyte | 1.55e-13 | 2 |
DN4 thymocyte | 1.55e-13 | 2 |
DN1 thymic pro-T cell | 1.55e-13 | 2 |
DN2 thymocyte | 1.55e-13 | 2 |
DN3 thymocyte | 1.55e-13 | 2 |
immature single positive thymocyte | 1.55e-13 | 2 |
early T lineage precursor | 1.55e-13 | 2 |
T cell | 1.28e-09 | 25 |
pro-T cell | 1.28e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.53e-56 | 4 |
hemolymphoid system gland | 5.53e-56 | 4 |
thymic region | 5.53e-56 | 4 |
pharyngeal gland | 5.53e-56 | 4 |
thymus primordium | 5.53e-56 | 4 |
pharyngeal epithelium | 1.18e-37 | 6 |
hemopoietic organ | 2.08e-32 | 7 |
immune organ | 2.08e-32 | 7 |
neck | 5.96e-23 | 10 |
gland of gut | 5.96e-23 | 10 |
chordate pharynx | 5.96e-23 | 10 |
pharyngeal region of foregut | 5.96e-23 | 10 |
pharynx | 6.11e-21 | 11 |
entire pharyngeal arch endoderm | 6.11e-21 | 11 |
early pharyngeal endoderm | 6.11e-21 | 11 |
pharyngeal arch system | 4.27e-13 | 18 |
upper respiratory tract | 1.91e-12 | 19 |
respiratory system epithelium | 1.17e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 2.21e-08 | 29 |
endocrine gland | 4.78e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.27e-08 | 51 |
immune system cancer | 3.27e-08 | 51 |
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