FFCP PHASE1:Hg19::chr20:60962115..60962126,+: Difference between revisions
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{{FFCP | 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461,25.5218567933172,49.3638901986284,76.4053030506623,64.5583925743651,70.717392640843,55.5213552206064,84.1748658879916,25.947432556366,59.7676928600334,37.4064777095249,47.6936297107098,53.3526015824099,46.7421875222682,47.2466214156287,72.5830204105521,97.3557194161805,51.5080482183342,50.1759048739626,63.8041381283987,61.4866008281533,53.1754923310419,8.57202304140731,14.2248025452754,12.6221598297695,21.2635012532597,51.4347462688868,77.6642391661753,32.9646912439458,34.3978320870479,81.7258649457119,34.615210911824,104.422935456298,72.7218503494771,53.7137309642667,23.01685862122,48.8556498379949,46.1490192777798,39.7882832895418,43.1378070858455,93.1831589447598,46.9790573424719,39.6594445628807,62.5682308130033,50.2446874032401,8.91137718514163,78.455933331976,40.205057580738,42.874366829448,9.76284221466185,8.5017945795351,6.2257205032289,15.5888436822974,25.7113130146152,9.12875732527676,9.52706309227921,14.2769420259154,39.3572351189113,87.6515044473711,49.5257216008533,75.4382599961709,32.7988602101764,125.645506542938,55.2987097483244,11.6576008941349,135.142396031358,32.0420744605568,47.6670183956189,69.439293024281,13.0113355871,11.8190773082191,14.8404838736631,8.88753224955092,8.30747113540179,24.6138664058199,13.1581864045724,19.8484471355718,44.6712960673436,28.2354965083506,4.28561468702629,6.38939072215766,12.7462776889693,7.05752793189023,7.5397014638243,56.8103558649992,25.3802253967379,9.03997448591862,12.1021903355642,95.3824295933623,71.2993286128163,9.18369186351014,11.4694380638681,59.1374264592095,18.2631744101899,31.3095007267001,14.8103023244986,8.07684949196217,55.9368185533852,38.5921532222176,51.8097651461687,60.9300637194992,54.4978511748787,37.2166280064811,14.5164528980959,19.7904585057328,55.7343723440963,41.3285013081915,12.2782244555369,57.5058240045566,32.5716704947536,98.4205107146756,33.3329186757421,42.400900921785,48.88908791789,23.9548669759521,20.9432125986744,44.0729483908516,17.485595750129,58.0169869386022,21.2877329422664,67.5466115616589,25.525814540805,64.0953212625852,19.0213182894009,8.25763491755008,13.5506927512454,40.9176047834525,12.2574160876953,24.2746843514675,16.4899112376554,10.396624011448,14.3702947378356,37.5538923460075,10.244247059804,6.44578879735772,42.7748147358696,26.9616447294543,195.150864058778,53.0395433815402,22.640428035642,14.6793370689453,14.3339583151451,65.6329698723648,11.6945363128373,20.0721317556574,17.9869125775236,39.0594769075089,36.511874661882,56.6740796382164,60.9383831953431,47.9675860920623,109.720901875904,81.4890749638434,139.487485548623,87.667734156242,208.839380230548,13.8675017739378,32.6916238790538,14.925049910258,12.5153924992893,14.4999107692667,13.5696725934332,9.62374756556491,3.91070700063905,150.705223308344,13.493197554971,9.29739069207809,30.4803447055746,17.7961316564346,8.0822463617505,11.3321084520429,16.9656781838467,31.1774518780032,51.9762174424474,54.0602390403432,57.6677797524288,21.1176848163109,15.4024219670412,20.3448089157869,14.6466490320813,13.2840703770077,78.2187121219888|short_description=p2@RPS21}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10409 | |||
|TSSclassifier=S | |||
|UniProt=P63220,Q6FGH5,Q9BYK1 | |||
|association_with_transcript=0bp_to_ENST00000343986,NM_001024,uc002ycr.2,uc002ycs.2,uc002yct.2_5end | |||
|coexpression_cluster_id=C447 | |||
|description=CAGE_peak_2_at_RPS21_5end | |||
|id=chr20:60962115..60962126,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.03e-39!682;CL:0000548!1.80e-39!679;CL:0000004!1.80e-39!679;CL:0000255!1.80e-39!679;CL:0000220!4.97e-24!246;CL:0002321!6.75e-24!248;CL:0000003!4.11e-22!722;CL:0000144!4.27e-22!625;CL:0000066!1.36e-20!254;CL:0002371!4.75e-17!591;CL:0000055!1.57e-15!180;CL:0000183!3.30e-15!59;CL:0000222!1.39e-14!119;CL:0000393!2.72e-14!60;CL:0000211!2.72e-14!60;CL:0000680!7.95e-14!57;CL:0000056!7.95e-14!57;CL:0000355!7.95e-14!57;CL:0000187!1.74e-13!54;CL:0000192!2.52e-11!42;CL:0000514!2.52e-11!42;CL:0000063!1.94e-10!578;CL:0000359!4.41e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;4.34e-08;43!CL:0000187;7.12e-08;55!CL:0000359;1.04e-07;32!CL:0000393;3.85e-07;61!CL:0000211;3.85e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.88e-24,250;CL:0000066,1.51e-20,253;CL:0000222,6.99e-15,121;CL:0000393,3.11e-14,61;CL:0000211,3.11e-14,61;CL:0000680,9.16e-14,58;CL:0000056,9.16e-14,58;CL:0000355,9.16e-14,58;CL:0000187,2.02e-13,55;CL:0000192,3.00e-11,43;CL:0000514,3.00e-11,43;CL:0000359,4.41e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;4.34e-08;43!CL:0000355;1.76e-07;58 | |||
|ontology_enrichment_disease=DOID:14566!1.51e-20!239;DOID:162!3.10e-19!235;DOID:0050687!4.76e-13!143;DOID:305!4.28e-11!106;DOID:0050686!3.19e-09!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.51e-20,239;DOID:162,3.10e-19,235;DOID:0050687,4.76e-13,143;DOID:305,4.28e-11,106;DOID:0050686,3.19e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0003104!9.11e-16!238;UBERON:0009142!9.11e-16!238;UBERON:0000486!2.39e-14!82;UBERON:0000914!2.39e-14!83;UBERON:0002329!2.39e-14!83;UBERON:0003077!2.39e-14!83;UBERON:0003059!2.39e-14!83;UBERON:0007282!2.39e-14!83;UBERON:0009618!2.39e-14!83;UBERON:0007285!2.39e-14!83;UBERON:0005256!2.66e-14!143;UBERON:0004290!2.80e-14!70;UBERON:0002100!1.35e-13!216;UBERON:0001134!2.94e-12!61;UBERON:0002036!2.94e-12!61;UBERON:0003082!2.94e-12!61;UBERON:0002385!7.12e-11!63;UBERON:0001015!7.12e-11!63;UBERON:0000383!7.12e-11!63;UBERON:0000490!1.35e-10!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.20e-07;37 | |||
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| |||
|short_description=p2@RPS21 | |||
}} |
Revision as of 09:31, 12 September 2013
Short description: | p2@RPS21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RPS21_5end |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000343986, NM_001024, uc002ycr.2, uc002ycs.2, uc002yct.2_5end |
EntrezGene: | RPS21 |
HGNC: | 10409 |
UniProt: | P63220Q6FGH5Q9BYK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.88e-24 | 250 |
epithelial cell | 1.51e-20 | 253 |
mesodermal cell | 6.99e-15 | 121 |
electrically responsive cell | 3.11e-14 | 61 |
electrically active cell | 3.11e-14 | 61 |
muscle precursor cell | 9.16e-14 | 58 |
myoblast | 9.16e-14 | 58 |
multi-potent skeletal muscle stem cell | 9.16e-14 | 58 |
muscle cell | 2.02e-13 | 55 |
smooth muscle cell | 3.00e-11 | 43 |
smooth muscle myoblast | 3.00e-11 | 43 |
vascular associated smooth muscle cell | 4.41e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.30e-16 | 78 |
multilaminar epithelium | 2.51e-14 | 83 |
somite | 3.06e-14 | 71 |
presomitic mesoderm | 3.06e-14 | 71 |
presumptive segmental plate | 3.06e-14 | 71 |
dermomyotome | 3.06e-14 | 71 |
trunk paraxial mesoderm | 3.06e-14 | 71 |
paraxial mesoderm | 1.65e-13 | 72 |
presumptive paraxial mesoderm | 1.65e-13 | 72 |
trunk | 2.02e-13 | 199 |
dense mesenchyme tissue | 2.27e-13 | 73 |
mesenchyme | 1.68e-12 | 160 |
entire embryonic mesenchyme | 1.68e-12 | 160 |
unilaminar epithelium | 2.10e-12 | 148 |
skeletal muscle tissue | 3.21e-12 | 62 |
striated muscle tissue | 3.21e-12 | 62 |
myotome | 3.21e-12 | 62 |
trunk mesenchyme | 8.07e-12 | 122 |
muscle tissue | 7.48e-11 | 64 |
musculature | 7.48e-11 | 64 |
musculature of body | 7.48e-11 | 64 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.51e-20 | 239 |
cancer | 3.10e-19 | 235 |
cell type cancer | 4.76e-13 | 143 |
carcinoma | 4.28e-11 | 106 |
organ system cancer | 3.19e-09 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.