FFCP PHASE1:Hg19::chr22:27013990..27013992,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1414|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2397|TSSclassifier=S|UniProt=P53674|association_with_transcript=0bp_to_NM_001887,uc003acy.1_5end|coexpression_cluster_id=C40|description=CAGE_peak_1_at_CRYBB1_5end|id=chr22:27013990..27013992,-|ontology_enrichment_celltype=CL:0000763!3.32e-11!112;CL:0000049!3.32e-11!112;CL:0002032!3.47e-09!165;CL:0000837!3.47e-09!165;CL:0002322!5.38e-09!5;CL:0000037!6.52e-09!172;CL:0000566!6.52e-09!172;CL:0000988!2.32e-08!182|ontology_enrichment_celltype_v019=CL:0000306;6.78e-25;4!CL:0002222;6.78e-25;4!CL:0002224;6.78e-25;4!CL:0000075;6.87e-10;27!CL:0002322;1.52e-09;5!CL:0000235;8.70e-08;6|ontology_enrichment_celltype_v019_2=CL:0000306,6.79e-25,4;CL:0002222,6.79e-25,4;CL:0002224,6.79e-25,4;CL:0000075,6.94e-10,27;CL:0002322,1.55e-09,5;CL:0000235,9.33e-08,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!1.28e-15!31;DOID:2531!2.46e-15!51;DOID:0060083!2.46e-15!51;DOID:1240!6.15e-14!39|ontology_enrichment_disease_v019=DOID:4960;4.53e-12;1!DOID:0070004;4.53e-12;1!DOID:8692;4.83e-11;31!DOID:2531;8.63e-09;51!DOID:0060083;8.63e-09;51!DOID:1240;1.24e-08;39|ontology_enrichment_disease_v019_2=DOID:2531,3.82e-12,51;DOID:0060083,3.82e-12,51;DOID:4960,4.53e-12,1;DOID:0070004,4.53e-12,1;DOID:8692,1.14e-11,31;DOID:1240,3.38e-09,39|ontology_enrichment_uberon=UBERON:0007023!8.52e-11!115;UBERON:0005743!1.13e-09!86;UBERON:0001017!1.25e-09!82;UBERON:0003056!1.45e-08!61;UBERON:0003080!3.65e-08!42;UBERON:0000073!4.95e-08!94;UBERON:0001016!4.95e-08!94;UBERON:0001049!5.17e-08!57;UBERON:0005068!5.17e-08!57;UBERON:0006241!5.17e-08!57;UBERON:0007135!5.17e-08!57;UBERON:0002346!1.17e-07!90;UBERON:0003075!1.20e-07!86;UBERON:0007284!1.20e-07!86;UBERON:0002791!1.52e-07!33;UBERON:0002780!2.48e-07!41;UBERON:0001890!2.48e-07!41;UBERON:0006240!2.48e-07!41;UBERON:0001893!3.19e-07!34;UBERON:0000955!3.76e-07!69;UBERON:0006238!3.76e-07!69;UBERON:0002619!5.76e-07!22|ontology_enrichment_uberon_v019=UBERON:0010077;6.78e-25;4!UBERON:0005389;6.78e-25;4!UBERON:0000484;6.78e-25;4!UBERON:0000965;6.78e-25;4!UBERON:0001803;6.78e-25;4!UBERON:0007625;2.00e-09;11!UBERON:0000970;6.73e-09;20!UBERON:0002104;1.76e-08;21!UBERON:0000020;9.33e-08;23!UBERON:0001801;1.65e-07;14!UBERON:0001032;1.94e-07;24!UBERON:0004456;1.94e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0010077,6.79e-25,4;UBERON:0005389,6.79e-25,4;UBERON:0000484,6.79e-25,4;UBERON:0002546,6.79e-25,4;UBERON:0000965,6.79e-25,4;UBERON:0001803,6.79e-25,4;UBERON:0003073,6.79e-25,4;UBERON:0005426,6.79e-25,4;UBERON:0000076,9.27e-13,8;UBERON:0007625,2.00e-09,11;UBERON:0000970,1.76e-08,21;UBERON:0002104,1.76e-08,21;UBERON:0001801,1.65e-07,14;UBERON:0000020,1.94e-07,24;UBERON:0001032,1.94e-07,24;UBERON:0004456,1.94e-07,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,1.23947520928483,0.142169232487422,0,0,0,0,1.56740831967947,0.647787332037959,0.77272670290256,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0.419317291016752,0,0,0,0.855038231223746,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,4.4153698290417,23.5310594884891,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7630744632855,483.313858341095,10.4493737869881,0,0,0.190254152234598,0,0,0.738651018262192,0,0.891786973732369,0,0,0,0,0,0,0,0.968532774145487,0,0.576479813667846,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0.997896857164083,0,0.635020748171649,0,2.24637742490767,0,0.156679895773023,2.50634477090067,2.87796022262726,0,0,0.851692475380653,0.687010689511529,0.921722292925374,0.671028323677248,1.00109485027145,1.17232857241224,0.278406173895242,1.23087398947712,0,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,4.80662807760128,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1414 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2397 | |||
|TSSclassifier=S | |||
|UniProt=P53674 | |||
|association_with_transcript=0bp_to_NM_001887,uc003acy.1_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_1_at_CRYBB1_5end | |||
|id=chr22:27013990..27013992,- | |||
|ontology_enrichment_celltype=CL:0000763!3.32e-11!112;CL:0000049!3.32e-11!112;CL:0002032!3.47e-09!165;CL:0000837!3.47e-09!165;CL:0002322!5.38e-09!5;CL:0000037!6.52e-09!172;CL:0000566!6.52e-09!172;CL:0000988!2.32e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000306;6.78e-25;4!CL:0002222;6.78e-25;4!CL:0002224;6.78e-25;4!CL:0000075;6.87e-10;27!CL:0002322;1.52e-09;5!CL:0000235;8.70e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,6.79e-25,4;CL:0002222,6.79e-25,4;CL:0002224,6.79e-25,4;CL:0000075,6.94e-10,27;CL:0002322,1.55e-09,5;CL:0000235,9.33e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.28e-15!31;DOID:2531!2.46e-15!51;DOID:0060083!2.46e-15!51;DOID:1240!6.15e-14!39 | |||
|ontology_enrichment_disease_v019=DOID:4960;4.53e-12;1!DOID:0070004;4.53e-12;1!DOID:8692;4.83e-11;31!DOID:2531;8.63e-09;51!DOID:0060083;8.63e-09;51!DOID:1240;1.24e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.82e-12,51;DOID:0060083,3.82e-12,51;DOID:4960,4.53e-12,1;DOID:0070004,4.53e-12,1;DOID:8692,1.14e-11,31;DOID:1240,3.38e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.52e-11!115;UBERON:0005743!1.13e-09!86;UBERON:0001017!1.25e-09!82;UBERON:0003056!1.45e-08!61;UBERON:0003080!3.65e-08!42;UBERON:0000073!4.95e-08!94;UBERON:0001016!4.95e-08!94;UBERON:0001049!5.17e-08!57;UBERON:0005068!5.17e-08!57;UBERON:0006241!5.17e-08!57;UBERON:0007135!5.17e-08!57;UBERON:0002346!1.17e-07!90;UBERON:0003075!1.20e-07!86;UBERON:0007284!1.20e-07!86;UBERON:0002791!1.52e-07!33;UBERON:0002780!2.48e-07!41;UBERON:0001890!2.48e-07!41;UBERON:0006240!2.48e-07!41;UBERON:0001893!3.19e-07!34;UBERON:0000955!3.76e-07!69;UBERON:0006238!3.76e-07!69;UBERON:0002619!5.76e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;6.78e-25;4!UBERON:0005389;6.78e-25;4!UBERON:0000484;6.78e-25;4!UBERON:0000965;6.78e-25;4!UBERON:0001803;6.78e-25;4!UBERON:0007625;2.00e-09;11!UBERON:0000970;6.73e-09;20!UBERON:0002104;1.76e-08;21!UBERON:0000020;9.33e-08;23!UBERON:0001801;1.65e-07;14!UBERON:0001032;1.94e-07;24!UBERON:0004456;1.94e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,6.79e-25,4;UBERON:0005389,6.79e-25,4;UBERON:0000484,6.79e-25,4;UBERON:0002546,6.79e-25,4;UBERON:0000965,6.79e-25,4;UBERON:0001803,6.79e-25,4;UBERON:0003073,6.79e-25,4;UBERON:0005426,6.79e-25,4;UBERON:0000076,9.27e-13,8;UBERON:0007625,2.00e-09,11;UBERON:0000970,1.76e-08,21;UBERON:0002104,1.76e-08,21;UBERON:0001801,1.65e-07,14;UBERON:0000020,1.94e-07,24;UBERON:0001032,1.94e-07,24;UBERON:0004456,1.94e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,1.23947520928483,0.142169232487422,0,0,0,0,1.56740831967947,0.647787332037959,0.77272670290256,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0.419317291016752,0,0,0,0.855038231223746,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,4.4153698290417,23.5310594884891,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7630744632855,483.313858341095,10.4493737869881,0,0,0.190254152234598,0,0,0.738651018262192,0,0.891786973732369,0,0,0,0,0,0,0,0.968532774145487,0,0.576479813667846,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0.997896857164083,0,0.635020748171649,0,2.24637742490767,0,0.156679895773023,2.50634477090067,2.87796022262726,0,0,0.851692475380653,0.687010689511529,0.921722292925374,0.671028323677248,1.00109485027145,1.17232857241224,0.278406173895242,1.23087398947712,0,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,4.80662807760128,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.539209063845416,0,0.937057782901357,0.182454789215666,0,0,0,0,0.30607276163049,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,945.277438684967,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0.160753148465019,0.687697182986169,0.415440338029185,0,0,0.242998226632099,0,0.157611414598396,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,8.95517894236241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.504143392443436,0.207471757392654,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.253663240775627,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0.79832133146375,0.115233987555779,0,0.203909198930495,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0.281951753939561,0.644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.227336094654718,0,0,0,0,0.476128862927481,0.258355639344024,0.186224142887574,0,0,0,0,0.342233301085281,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@CRYBB1 | |||
}} |
Revision as of 11:18, 12 September 2013
Short description: | p1@CRYBB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CRYBB1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_NM_001887, uc003acy.1_5end |
EntrezGene: | CRYBB1 |
HGNC: | 2397 |
UniProt: | P53674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 6.79e-25 | 4 |
vertebrate lens cell | 6.79e-25 | 4 |
lens epithelial cell | 6.79e-25 | 4 |
columnar/cuboidal epithelial cell | 6.94e-10 | 27 |
embryonic stem cell | 1.55e-09 | 5 |
macrophage | 9.33e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 6.79e-25 | 4 |
transparent eye structure | 6.79e-25 | 4 |
simple cuboidal epithelium | 6.79e-25 | 4 |
cranial placode | 6.79e-25 | 4 |
lens of camera-type eye | 6.79e-25 | 4 |
epithelium of lens | 6.79e-25 | 4 |
lens placode | 6.79e-25 | 4 |
lens vesicle | 6.79e-25 | 4 |
external ectoderm | 9.27e-13 | 8 |
pigment epithelium of eye | 2.00e-09 | 11 |
eye | 1.76e-08 | 21 |
visual system | 1.76e-08 | 21 |
anterior segment of eyeball | 1.65e-07 | 14 |
sense organ | 1.94e-07 | 24 |
sensory system | 1.94e-07 | 24 |
entire sense organ system | 1.94e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.82e-12 | 51 |
immune system cancer | 3.82e-12 | 51 |
bone marrow cancer | 4.53e-12 | 1 |
myeloma | 4.53e-12 | 1 |
myeloid leukemia | 1.14e-11 | 31 |
leukemia | 3.38e-09 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.