FFCP PHASE1:Hg19::chr2:159994667..159994676,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2664|description=CAGE_peak_at_chr2:159994667..159994676,+|id=chr2:159994667..159994676,+|ontology_enrichment_celltype=CL:1000306!8.50e-10!4;CL:0002547!8.50e-10!4;CL:0000077!1.26e-09!19;CL:0002097!4.30e-09!2|ontology_enrichment_celltype_v019=CL:0001014;2.73e-11;2!CL:0001016;2.73e-11;2!CL:0002097;3.70e-11;2!CL:0000174;7.26e-08;3!CL:0002178;7.26e-08;3|ontology_enrichment_celltype_v019_2=CL:0001014,2.73e-11,2;CL:0001016,2.73e-11,2;CL:0002097,4.09e-11,2;CL:0002178,6.34e-08,3;CL:0000174,7.76e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:114!1.74e-09!2|ontology_enrichment_disease_v019=DOID:6193;2.30e-21;1!DOID:8552;6.31e-21;1!DOID:8692;5.12e-15;31!DOID:3350;2.23e-11;2!DOID:114;3.70e-11;2!DOID:3493;3.70e-11;2!DOID:1036;5.15e-11;8!DOID:1240;6.08e-09;39|ontology_enrichment_disease_v019_2=DOID:6193,1.88e-21,1;DOID:8552,5.16e-21,1;DOID:8692,3.62e-16,31;DOID:1240,6.92e-13,39;DOID:3350,2.02e-11,2;DOID:3493,3.02e-11,2;DOID:114,3.70e-11,2;DOID:1036,5.41e-11,8;DOID:2531,6.98e-10,51;DOID:0060083,6.98e-10,51;DOID:0050686,8.88e-07,137|ontology_enrichment_uberon=UBERON:0000415!8.50e-10!4;UBERON:0007240!8.50e-10!4;UBERON:0005742!8.50e-10!4;UBERON:0005734!8.50e-10!4;UBERON:0004664!8.50e-10!4;UBERON:0004663!8.50e-10!4|ontology_enrichment_uberon_v019=UBERON:0002369;7.26e-08;3!UBERON:0001235;7.26e-08;3!UBERON:0006858;7.26e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0002369,7.76e-08,3;UBERON:0001235,7.76e-08,3;UBERON:0006858,7.76e-08,3|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.397227542439656,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,4.22961015263549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,1.82832850090172,0,0,0,0,3.49660473756833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,3.95567874684718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.399358000997982,1.71690419254628,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32140586367385,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,3.61207091297091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,1.50109113962448,0,0,0,0,0,0.926404341482917,0.438568099157414,0,0.192914038270915,0.675769762612291,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,1.86485443868962,0,0,0,0,0,0,0,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:159994667..159994676,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2664 | |||
|description=CAGE_peak_at_chr2:159994667..159994676,+ | |||
|id=chr2:159994667..159994676,+ | |||
|ontology_enrichment_celltype=CL:1000306!8.50e-10!4;CL:0002547!8.50e-10!4;CL:0000077!1.26e-09!19;CL:0002097!4.30e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0001014;2.73e-11;2!CL:0001016;2.73e-11;2!CL:0002097;3.70e-11;2!CL:0000174;7.26e-08;3!CL:0002178;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.73e-11,2;CL:0001016,2.73e-11,2;CL:0002097,4.09e-11,2;CL:0002178,6.34e-08,3;CL:0000174,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!1.74e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:6193;2.30e-21;1!DOID:8552;6.31e-21;1!DOID:8692;5.12e-15;31!DOID:3350;2.23e-11;2!DOID:114;3.70e-11;2!DOID:3493;3.70e-11;2!DOID:1036;5.15e-11;8!DOID:1240;6.08e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.88e-21,1;DOID:8552,5.16e-21,1;DOID:8692,3.62e-16,31;DOID:1240,6.92e-13,39;DOID:3350,2.02e-11,2;DOID:3493,3.02e-11,2;DOID:114,3.70e-11,2;DOID:1036,5.41e-11,8;DOID:2531,6.98e-10,51;DOID:0060083,6.98e-10,51;DOID:0050686,8.88e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000415!8.50e-10!4;UBERON:0007240!8.50e-10!4;UBERON:0005742!8.50e-10!4;UBERON:0005734!8.50e-10!4;UBERON:0004664!8.50e-10!4;UBERON:0004663!8.50e-10!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;7.26e-08;3!UBERON:0001235;7.26e-08;3!UBERON:0006858;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,7.76e-08,3;UBERON:0001235,7.76e-08,3;UBERON:0006858,7.76e-08,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.397227542439656,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,4.22961015263549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,1.82832850090172,0,0,0,0,3.49660473756833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,3.95567874684718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.399358000997982,1.71690419254628,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32140586367385,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,3.61207091297091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,1.50109113962448,0,0,0,0,0,0.926404341482917,0.438568099157414,0,0.192914038270915,0.675769762612291,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,1.86485443868962,0,0,0,0,0,0,0,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:159994667..159994676,+ | |||
}} |
Revision as of 14:17, 12 September 2013
Short description: | p@chr2:159994667..159994676, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:159994667..159994676, + |
Coexpression cluster: | C2664_leukemia_signet_epithelioid_chronic_acute_small_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.73e-11 | 2 |
immature CD1a-positive Langerhans cell | 2.73e-11 | 2 |
cortical cell of adrenal gland | 4.09e-11 | 2 |
epithelial cell of stomach | 6.34e-08 | 3 |
steroid hormone secreting cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 7.76e-08 | 3 |
adrenal cortex | 7.76e-08 | 3 |
adrenal/interrenal gland | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.88e-21 | 1 |
chronic myeloid leukemia | 5.16e-21 | 1 |
myeloid leukemia | 3.62e-16 | 31 |
leukemia | 6.92e-13 | 39 |
mesenchymal cell neoplasm | 2.02e-11 | 2 |
signet ring cell adenocarcinoma | 3.02e-11 | 2 |
heart disease | 3.70e-11 | 2 |
chronic leukemia | 5.41e-11 | 8 |
hematologic cancer | 6.98e-10 | 51 |
immune system cancer | 6.98e-10 | 51 |
organ system cancer | 8.88e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.