FFCP PHASE1:Hg19::chr2:211543338..211543342,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C768|description=CAGE_peak_at_chr2:211543338..211543342,+|id=chr2:211543338..211543342,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;1.78e-08;1|ontology_enrichment_celltype_v019_2=CL:0002553,1.65e-08,1|ontology_enrichment_development_v019=UBERON:0008947;1.33e-29;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,3.08e-11,106;DOID:0050687,1.16e-07,143|ontology_enrichment_uberon=UBERON:0001737!1.89e-17!9;UBERON:0004921!2.35e-08!129;UBERON:0004185!2.35e-08!129;UBERON:0001007!4.73e-08!155;UBERON:0001555!4.73e-08!155;UBERON:0007026!4.73e-08!155;UBERON:0008947!1.82e-07!38;UBERON:0003258!1.82e-07!38;UBERON:0001041!2.01e-07!98;UBERON:0004119!4.52e-07!169;UBERON:0000925!4.52e-07!169;UBERON:0006595!4.52e-07!169;UBERON:0001557!5.28e-07!19|ontology_enrichment_uberon_v019=UBERON:0001737;2.76e-67;9!UBERON:0001557;2.76e-67;9!UBERON:0000072;4.71e-21;37!UBERON:0000065;3.61e-17;44!UBERON:0002108;1.95e-13;4!UBERON:0001004;1.79e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.77e-67,9;UBERON:0001557,3.35e-31,19;UBERON:0008947,3.65e-22,38;UBERON:0003258,3.65e-22,38;UBERON:0004921,4.53e-19,118;UBERON:0000072,1.48e-17,47;UBERON:0001041,1.13e-16,87;UBERON:0000065,4.95e-15,54;UBERON:0001007,6.92e-15,145;UBERON:0001555,6.92e-15,145;UBERON:0007026,6.92e-15,145;UBERON:0002108,2.04e-13,4;UBERON:0004119,3.62e-13,160;UBERON:0000925,3.62e-13,160;UBERON:0006595,3.62e-13,160;UBERON:0001004,1.88e-10,74;UBERON:0011216,2.03e-09,223;UBERON:0001048,8.90e-08,160|phase1_expression=0,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0.515281080091258,0.18611685633159,0.168776332241266,0.292311015483596,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0.721879481669586,10.0560780033867,9.27215795429559,8.91740810568883,8.27204795492955,8.93305720778865,12.338072193777,12.6741429670555,12.5581737680221,7.31019598198142,0,0,0,0,27.8861076608028,0.982827216677626,7.08947888017685,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75848599005639,0,0,0,0,0,0,0.462145851343933,0,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,8.94366107379402,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,10.0223386437471,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,1.22206028986725,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0.171986032471617,4.74106023316517,2.19267951258557,1.88865551222381,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.26961417541674,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,2.68931008999267,0,0,0,0,0,0,0,0,0,0,0,4.9827759450548,6.62534444561107,0,0.26446520348538,0.855434189421647,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C768 | |||
|description=CAGE_peak_at_chr2:211543338..211543342,+ | |||
|id=chr2:211543338..211543342,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.78e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.65e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.33e-29;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.08e-11,106;DOID:0050687,1.16e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.89e-17!9;UBERON:0004921!2.35e-08!129;UBERON:0004185!2.35e-08!129;UBERON:0001007!4.73e-08!155;UBERON:0001555!4.73e-08!155;UBERON:0007026!4.73e-08!155;UBERON:0008947!1.82e-07!38;UBERON:0003258!1.82e-07!38;UBERON:0001041!2.01e-07!98;UBERON:0004119!4.52e-07!169;UBERON:0000925!4.52e-07!169;UBERON:0006595!4.52e-07!169;UBERON:0001557!5.28e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.76e-67;9!UBERON:0001557;2.76e-67;9!UBERON:0000072;4.71e-21;37!UBERON:0000065;3.61e-17;44!UBERON:0002108;1.95e-13;4!UBERON:0001004;1.79e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.77e-67,9;UBERON:0001557,3.35e-31,19;UBERON:0008947,3.65e-22,38;UBERON:0003258,3.65e-22,38;UBERON:0004921,4.53e-19,118;UBERON:0000072,1.48e-17,47;UBERON:0001041,1.13e-16,87;UBERON:0000065,4.95e-15,54;UBERON:0001007,6.92e-15,145;UBERON:0001555,6.92e-15,145;UBERON:0007026,6.92e-15,145;UBERON:0002108,2.04e-13,4;UBERON:0004119,3.62e-13,160;UBERON:0000925,3.62e-13,160;UBERON:0006595,3.62e-13,160;UBERON:0001004,1.88e-10,74;UBERON:0011216,2.03e-09,223;UBERON:0001048,8.90e-08,160 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0.515281080091258,0.18611685633159,0.168776332241266,0.292311015483596,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0.721879481669586,10.0560780033867,9.27215795429559,8.91740810568883,8.27204795492955,8.93305720778865,12.338072193777,12.6741429670555,12.5581737680221,7.31019598198142,0,0,0,0,27.8861076608028,0.982827216677626,7.08947888017685,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75848599005639,0,0,0,0,0,0,0.462145851343933,0,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,8.94366107379402,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,10.0223386437471,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,1.22206028986725,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0.171986032471617,4.74106023316517,2.19267951258557,1.88865551222381,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.26961417541674,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,2.68931008999267,0,0,0,0,0,0,0,0,0,0,0,4.9827759450548,6.62534444561107,0,0.26446520348538,0.855434189421647,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.247871528518004,0,0.318004350653419,0.0788617450012534,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00326405540328,1.74847648403166,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,1.0580536810308,0,0,0.432626562123789,0,0.546327859818478,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:211543338..211543342,+ | |||
}} |
Revision as of 16:23, 12 September 2013
Short description: | p@chr2:211543338..211543342, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:211543338..211543342, + |
Coexpression cluster: | C768_Hepatocyte_liver_cervical_Hep2_epitheloid_large_nonsmall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.65e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.77e-67 | 9 |
upper respiratory tract | 3.35e-31 | 19 |
respiratory primordium | 3.65e-22 | 38 |
endoderm of foregut | 3.65e-22 | 38 |
subdivision of digestive tract | 4.53e-19 | 118 |
segment of respiratory tract | 1.48e-17 | 47 |
foregut | 1.13e-16 | 87 |
respiratory tract | 4.95e-15 | 54 |
digestive system | 6.92e-15 | 145 |
digestive tract | 6.92e-15 | 145 |
primitive gut | 6.92e-15 | 145 |
small intestine | 2.04e-13 | 4 |
endoderm-derived structure | 3.62e-13 | 160 |
endoderm | 3.62e-13 | 160 |
presumptive endoderm | 3.62e-13 | 160 |
respiratory system | 1.88e-10 | 74 |
organ system subdivision | 2.03e-09 | 223 |
primordium | 8.90e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.08e-11 | 106 |
cell type cancer | 1.16e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.