FFCP PHASE1:Hg19::chr2:216257825..216257843,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2335|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3778|TSSclassifier=W|UniProt=|association_with_transcript=82bp_to_uc010zjp.1_5end|coexpression_cluster_id=C50|description=CAGE_peak_63_at_FN1_5end|id=chr2:216257825..216257843,-|ontology_enrichment_celltype=CL:0000055!1.12e-26!180;CL:0000680!3.54e-16!57;CL:0000056!3.54e-16!57;CL:0000355!3.54e-16!57;CL:0000183!4.67e-16!59;CL:0000057!1.57e-15!75;CL:0000187!1.75e-15!54;CL:0000393!1.46e-12!60;CL:0000211!1.46e-12!60;CL:0002371!1.23e-11!591;CL:0002620!3.05e-10!23;CL:0000048!7.38e-10!430;CL:0000192!9.33e-10!42;CL:0000514!9.33e-10!42;CL:0000144!1.00e-09!625;CL:0000723!3.57e-09!436;CL:0000034!1.14e-08!444;CL:0000359!7.68e-08!32;CL:0000188!2.17e-07!9;CL:0002494!4.14e-07!16;CL:0000548!4.57e-07!679;CL:0000004!4.57e-07!679;CL:0000255!4.57e-07!679;CL:0000012!8.71e-07!682|ontology_enrichment_celltype_v019=CL:0000349;5.89e-11;19!CL:0000134;3.79e-08;55!CL:0002494;4.70e-08;16!CL:0000723;8.50e-08;61!CL:0000034;1.02e-07;69!CL:0000594;1.41e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,1.87e-11,76;CL:0000349,6.67e-11,19;CL:0000048,2.55e-08,427;CL:0002494,4.10e-08,16;CL:0000723,5.41e-08,433;CL:0000034,1.42e-07,441;CL:0000594,2.04e-07,3;CL:0002620,9.06e-07,23|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;6.17e-08;5!DOID:450;6.17e-08;5!DOID:66;6.17e-08;5!DOID:423;6.17e-08;5!DOID:0080000;6.17e-08;5!DOID:11722;6.17e-08;5|ontology_enrichment_disease_v019_2=DOID:17,6.35e-08,5;DOID:450,6.35e-08,5;DOID:66,6.35e-08,5;DOID:423,6.35e-08,5;DOID:0080000,6.35e-08,5;DOID:11722,6.35e-08,5|ontology_enrichment_uberon=UBERON:0000914!1.44e-18!83;UBERON:0002329!1.44e-18!83;UBERON:0003077!1.44e-18!83;UBERON:0003059!1.44e-18!83;UBERON:0007282!1.44e-18!83;UBERON:0009618!1.44e-18!83;UBERON:0007285!1.44e-18!83;UBERON:0004290!5.22e-16!70;UBERON:0001134!3.73e-14!61;UBERON:0002036!3.73e-14!61;UBERON:0003082!3.73e-14!61;UBERON:0005256!1.85e-13!143;UBERON:0002385!2.98e-13!63;UBERON:0001015!2.98e-13!63;UBERON:0000383!2.98e-13!63;UBERON:0000486!1.08e-12!82;UBERON:0004872!1.64e-09!84;UBERON:0001637!1.39e-07!42;UBERON:0003509!1.39e-07!42;UBERON:0004572!1.39e-07!42;UBERON:0002049!1.65e-07!79;UBERON:0007798!1.65e-07!79;UBERON:0004535!2.85e-07!110;UBERON:0005631!5.29e-07!14;UBERON:0000158!5.29e-07!14;UBERON:0003914!7.60e-07!118|ontology_enrichment_uberon_v019=UBERON:0005631;5.75e-09;10!UBERON:0000158;5.75e-09;10!UBERON:0000478;3.22e-08;24|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.93e-10,14;UBERON:0000158,2.93e-10,14;UBERON:0000478,3.53e-08,24|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,3.49506195408276,3.16520373874144,0.495065411840187,0.994192127183747,2.01697543935533,1.80808358407193,2.19093027116212,0.487932798790507,0.369363174230364,0,0.626909442956176,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0.639312809217652,0,0,0.289693037921647,2.3858578411533,11.6792368872633,0.283604451492204,0.665188192387692,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,1.49091585508596,0.633152558322899,1.72131935057184,2.29469296599051,1.77334191099179,1.68203280042692,4.2699598291882,1.72667283892012,1.55605517699883,0,0.490385709340376,2.57307626996383,10.37116664064,0,1.87296046098192,0,0.896692083310806,0.822041490506354,0.647491777472526,0.561803226808994,0.204154171254893,0.859840221182376,0.309977343527296,0,1.48360157567134,0,0,0.336672227908132,0.750711119231785,0,1.31693286264251,0.919463387397059,0.600952235626387,0.113432183160021,1.97328599257748,1.06778694409284,3.17897851739343,2.10063767259082,0.618315175430633,1.28820270022815,0,1.85653965465393,0.389748020644795,2.27190396819703,0.368199594569197,0.80823028409406,2.4850671476163,0.503760491138201,0.339121184620975,0,0,0,0,0,0.69716365721711,0,0,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,3.99189560401794,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.80672114403045,0,0,0.845302752556,0,0,0,1.41849132023278,0.799266537048298,0.428933980974443,0,0,0,0,1.58390374586686,0.301439377059586,0,0.199945982364114,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,2.50085260529839,0.542530047399471,2.07970861530807,2.85486382075459,0.788512075169673,0.702848489956279,0.601892199455438,2.27407504055985,0,1.32845119707087,2.58116835958384,0.347534457872331,0.979005787313703,1.0294302714325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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=82bp_to_uc010zjp.1_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_63_at_FN1_5end | |||
|id=chr2:216257825..216257843,- | |||
|ontology_enrichment_celltype=CL:0000055!1.12e-26!180;CL:0000680!3.54e-16!57;CL:0000056!3.54e-16!57;CL:0000355!3.54e-16!57;CL:0000183!4.67e-16!59;CL:0000057!1.57e-15!75;CL:0000187!1.75e-15!54;CL:0000393!1.46e-12!60;CL:0000211!1.46e-12!60;CL:0002371!1.23e-11!591;CL:0002620!3.05e-10!23;CL:0000048!7.38e-10!430;CL:0000192!9.33e-10!42;CL:0000514!9.33e-10!42;CL:0000144!1.00e-09!625;CL:0000723!3.57e-09!436;CL:0000034!1.14e-08!444;CL:0000359!7.68e-08!32;CL:0000188!2.17e-07!9;CL:0002494!4.14e-07!16;CL:0000548!4.57e-07!679;CL:0000004!4.57e-07!679;CL:0000255!4.57e-07!679;CL:0000012!8.71e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.89e-11;19!CL:0000134;3.79e-08;55!CL:0002494;4.70e-08;16!CL:0000723;8.50e-08;61!CL:0000034;1.02e-07;69!CL:0000594;1.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.87e-11,76;CL:0000349,6.67e-11,19;CL:0000048,2.55e-08,427;CL:0002494,4.10e-08,16;CL:0000723,5.41e-08,433;CL:0000034,1.42e-07,441;CL:0000594,2.04e-07,3;CL:0002620,9.06e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.17e-08;5!DOID:450;6.17e-08;5!DOID:66;6.17e-08;5!DOID:423;6.17e-08;5!DOID:0080000;6.17e-08;5!DOID:11722;6.17e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.35e-08,5;DOID:450,6.35e-08,5;DOID:66,6.35e-08,5;DOID:423,6.35e-08,5;DOID:0080000,6.35e-08,5;DOID:11722,6.35e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.44e-18!83;UBERON:0002329!1.44e-18!83;UBERON:0003077!1.44e-18!83;UBERON:0003059!1.44e-18!83;UBERON:0007282!1.44e-18!83;UBERON:0009618!1.44e-18!83;UBERON:0007285!1.44e-18!83;UBERON:0004290!5.22e-16!70;UBERON:0001134!3.73e-14!61;UBERON:0002036!3.73e-14!61;UBERON:0003082!3.73e-14!61;UBERON:0005256!1.85e-13!143;UBERON:0002385!2.98e-13!63;UBERON:0001015!2.98e-13!63;UBERON:0000383!2.98e-13!63;UBERON:0000486!1.08e-12!82;UBERON:0004872!1.64e-09!84;UBERON:0001637!1.39e-07!42;UBERON:0003509!1.39e-07!42;UBERON:0004572!1.39e-07!42;UBERON:0002049!1.65e-07!79;UBERON:0007798!1.65e-07!79;UBERON:0004535!2.85e-07!110;UBERON:0005631!5.29e-07!14;UBERON:0000158!5.29e-07!14;UBERON:0003914!7.60e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.75e-09;10!UBERON:0000158;5.75e-09;10!UBERON:0000478;3.22e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.93e-10,14;UBERON:0000158,2.93e-10,14;UBERON:0000478,3.53e-08,24 | |||
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| |||
|short_description=p63@FN1 | |||
}} |
Revision as of 16:35, 12 September 2013
Short description: | p63@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_63_at_FN1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 82bp_to_uc010zjp.1_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.87e-11 | 76 |
extraembryonic cell | 6.67e-11 | 19 |
multi fate stem cell | 2.55e-08 | 427 |
cardiocyte | 4.10e-08 | 16 |
somatic stem cell | 5.41e-08 | 433 |
stem cell | 1.42e-07 | 441 |
skeletal muscle satellite cell | 2.04e-07 | 3 |
skin fibroblast | 9.06e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.93e-10 | 14 |
membranous layer | 2.93e-10 | 14 |
extraembryonic structure | 3.53e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.35e-08 | 5 |
myotonic disease | 6.35e-08 | 5 |
muscle tissue disease | 6.35e-08 | 5 |
myopathy | 6.35e-08 | 5 |
muscular disease | 6.35e-08 | 5 |
myotonic dystrophy | 6.35e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.