FFCP PHASE1:Hg19::chr2:223161695..223161697,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:223161695..223161697,-|id=chr2:223161695..223161697,-|ontology_enrichment_celltype=CL:0002603!1.42e-28!3;CL:0000148!4.45e-23!10;CL:0000541!4.45e-23!10;CL:0000333!8.07e-20!41;CL:0002322!6.97e-17!5;CL:0000147!1.82e-16!14;CL:0000133!1.92e-16!59;CL:0000710!3.17e-16!20;CL:0002567!1.33e-13!3;CL:0000221!1.86e-13!71;CL:0000243!2.72e-13!15;CL:0000125!2.72e-13!15;CL:0000030!2.72e-13!15;CL:0000339!2.72e-13!15;CL:0000128!1.34e-12!7;CL:0000126!1.34e-12!7;CL:0000127!1.34e-12!7;CL:0002453!1.34e-12!7;CL:0000075!6.58e-12!27;CL:0000095!7.02e-12!17;CL:0000123!7.02e-12!17;CL:0002566!1.08e-10!1;CL:0002574!3.96e-10!1;CL:0002077!1.17e-09!33;CL:0002319!2.58e-08!25|ontology_enrichment_celltype_v019=CL:0002567;3.35e-66;3!CL:0000148;8.54e-21;10!CL:0002603;7.35e-18;3!CL:0000214;1.03e-17;3!CL:0000147;3.41e-15;14!CL:0000710;5.70e-11;20!CL:0000128;1.96e-08;7!CL:0000126;1.96e-08;7!CL:0000127;1.96e-08;7!CL:0000075;2.14e-08;27!CL:0002077;3.59e-07;34!CL:0000153;8.61e-07;9!CL:0000447;8.61e-07;9|ontology_enrichment_celltype_v019_2=CL:0002567,3.35e-66,3;CL:0000148,8.54e-21,10;CL:0000541,8.54e-21,10;CL:0002603,8.00e-18,3;CL:0000214,9.46e-18,3;CL:0000147,3.41e-15,14;CL:0000333,2.84e-11,41;CL:0000710,5.70e-11,20;CL:0000128,2.03e-08,7;CL:0000126,2.03e-08,7;CL:0000127,2.03e-08,7;CL:0002453,2.03e-08,7;CL:0000075,2.14e-08,27;CL:0000133,3.34e-08,59;CL:0000221,6.64e-07,72;CL:0002077,7.16e-07,34;CL:0000153,8.37e-07,9;CL:0000447,8.37e-07,9|ontology_enrichment_development_v019=CL:0000133;2.97e-08;59|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002037!1.32e-14!6;UBERON:0006215!1.32e-14!6;UBERON:0002680!6.48e-10!9;UBERON:0001895!6.48e-10!9;UBERON:0010092!6.48e-10!9;UBERON:0004733!1.49e-07!12;UBERON:0002028!1.49e-07!12;UBERON:0007277!1.49e-07!12;UBERON:0004732!5.24e-07!13|ontology_enrichment_uberon_v019=UBERON:0006915;1.03e-17;3!UBERON:0007616;1.03e-17;3!UBERON:0002217;1.03e-17;3!UBERON:0002018;1.03e-17;3!UBERON:0002037;1.27e-09;6!UBERON:0004905;1.75e-07;8!UBERON:0000982;1.75e-07;8!UBERON:0004770;1.75e-07;8!UBERON:0002680;7.69e-07;9!UBERON:0001895;7.69e-07;9!UBERON:0004457;8.61e-07;9!UBERON:0000042;8.61e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0006915,9.46e-18,3;UBERON:0007616,9.46e-18,3;UBERON:0002217,9.46e-18,3;UBERON:0002018,9.46e-18,3;UBERON:0002037,1.32e-09,6;UBERON:0006215,1.32e-09,6;UBERON:0004905,1.69e-07,8;UBERON:0000982,1.69e-07,8;UBERON:0004770,1.69e-07,8;UBERON:0002680,7.91e-07,9;UBERON:0001895,7.91e-07,9;UBERON:0010092,7.91e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09305798730539,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,1.14596527667483,2.34434894420094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73548718412503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:223161695..223161697,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:223161695..223161697,- | |||
|id=chr2:223161695..223161697,- | |||
|ontology_enrichment_celltype=CL:0002603!1.42e-28!3;CL:0000148!4.45e-23!10;CL:0000541!4.45e-23!10;CL:0000333!8.07e-20!41;CL:0002322!6.97e-17!5;CL:0000147!1.82e-16!14;CL:0000133!1.92e-16!59;CL:0000710!3.17e-16!20;CL:0002567!1.33e-13!3;CL:0000221!1.86e-13!71;CL:0000243!2.72e-13!15;CL:0000125!2.72e-13!15;CL:0000030!2.72e-13!15;CL:0000339!2.72e-13!15;CL:0000128!1.34e-12!7;CL:0000126!1.34e-12!7;CL:0000127!1.34e-12!7;CL:0002453!1.34e-12!7;CL:0000075!6.58e-12!27;CL:0000095!7.02e-12!17;CL:0000123!7.02e-12!17;CL:0002566!1.08e-10!1;CL:0002574!3.96e-10!1;CL:0002077!1.17e-09!33;CL:0002319!2.58e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002567;3.35e-66;3!CL:0000148;8.54e-21;10!CL:0002603;7.35e-18;3!CL:0000214;1.03e-17;3!CL:0000147;3.41e-15;14!CL:0000710;5.70e-11;20!CL:0000128;1.96e-08;7!CL:0000126;1.96e-08;7!CL:0000127;1.96e-08;7!CL:0000075;2.14e-08;27!CL:0002077;3.59e-07;34!CL:0000153;8.61e-07;9!CL:0000447;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.35e-66,3;CL:0000148,8.54e-21,10;CL:0000541,8.54e-21,10;CL:0002603,8.00e-18,3;CL:0000214,9.46e-18,3;CL:0000147,3.41e-15,14;CL:0000333,2.84e-11,41;CL:0000710,5.70e-11,20;CL:0000128,2.03e-08,7;CL:0000126,2.03e-08,7;CL:0000127,2.03e-08,7;CL:0002453,2.03e-08,7;CL:0000075,2.14e-08,27;CL:0000133,3.34e-08,59;CL:0000221,6.64e-07,72;CL:0002077,7.16e-07,34;CL:0000153,8.37e-07,9;CL:0000447,8.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000133;2.97e-08;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002037!1.32e-14!6;UBERON:0006215!1.32e-14!6;UBERON:0002680!6.48e-10!9;UBERON:0001895!6.48e-10!9;UBERON:0010092!6.48e-10!9;UBERON:0004733!1.49e-07!12;UBERON:0002028!1.49e-07!12;UBERON:0007277!1.49e-07!12;UBERON:0004732!5.24e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.03e-17;3!UBERON:0007616;1.03e-17;3!UBERON:0002217;1.03e-17;3!UBERON:0002018;1.03e-17;3!UBERON:0002037;1.27e-09;6!UBERON:0004905;1.75e-07;8!UBERON:0000982;1.75e-07;8!UBERON:0004770;1.75e-07;8!UBERON:0002680;7.69e-07;9!UBERON:0001895;7.69e-07;9!UBERON:0004457;8.61e-07;9!UBERON:0000042;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,9.46e-18,3;UBERON:0007616,9.46e-18,3;UBERON:0002217,9.46e-18,3;UBERON:0002018,9.46e-18,3;UBERON:0002037,1.32e-09,6;UBERON:0006215,1.32e-09,6;UBERON:0004905,1.69e-07,8;UBERON:0000982,1.69e-07,8;UBERON:0004770,1.69e-07,8;UBERON:0002680,7.91e-07,9;UBERON:0001895,7.91e-07,9;UBERON:0010092,7.91e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09305798730539,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,1.14596527667483,2.34434894420094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73548718412503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:223161695..223161697,- | |||
}} |
Revision as of 17:03, 12 September 2013
Short description: | p@chr2:223161695..223161697, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:223161695..223161697, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.35e-66 | 3 |
melanocyte | 8.54e-21 | 10 |
melanoblast | 8.54e-21 | 10 |
astrocyte of the cerebellum | 8.00e-18 | 3 |
synovial cell | 9.46e-18 | 3 |
pigment cell | 3.41e-15 | 14 |
migratory neural crest cell | 2.84e-11 | 41 |
neurecto-epithelial cell | 5.70e-11 | 20 |
oligodendrocyte | 2.03e-08 | 7 |
macroglial cell | 2.03e-08 | 7 |
astrocyte | 2.03e-08 | 7 |
oligodendrocyte precursor cell | 2.03e-08 | 7 |
columnar/cuboidal epithelial cell | 2.14e-08 | 27 |
neurectodermal cell | 3.34e-08 | 59 |
ectodermal cell | 6.64e-07 | 72 |
ecto-epithelial cell | 7.16e-07 | 34 |
GAG secreting cell | 8.37e-07 | 9 |
carbohydrate secreting cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 9.46e-18 | 3 |
layer of synovial tissue | 9.46e-18 | 3 |
synovial joint | 9.46e-18 | 3 |
synovial membrane of synovial joint | 9.46e-18 | 3 |
cerebellum | 1.32e-09 | 6 |
rhombic lip | 1.32e-09 | 6 |
articulation | 1.69e-07 | 8 |
skeletal joint | 1.69e-07 | 8 |
articular system | 1.69e-07 | 8 |
regional part of metencephalon | 7.91e-07 | 9 |
metencephalon | 7.91e-07 | 9 |
future metencephalon | 7.91e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.