FFCP PHASE1:Hg19::chr2:235887339..235887353,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23677|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10826|TSSclassifier=S|UniProt=Q9P0V3,C9JWW6|association_with_transcript=0bp_to_ENST00000344528,ENST00000444916,ENST00000489601,uc002vvq.2_5end|coexpression_cluster_id=C37|description=CAGE_peak_9_at_SH3BP4_5end|id=chr2:235887339..235887353,+|ontology_enrichment_celltype=CL:0000066!1.00e-07!254|ontology_enrichment_celltype_v019=CL:0002178;3.20e-29;3|ontology_enrichment_celltype_v019_2=CL:0002178,5.18e-29,3|ontology_enrichment_development_v019=UBERON:0006298;2.53e-11;1!UBERON:0008801;3.24e-11;1!UBERON:0008425;4.15e-11;1!UBERON:0006595;2.28e-07;86|ontology_enrichment_disease=DOID:305!1.72e-15!106;DOID:0050687!3.34e-11!143;DOID:299!2.05e-07!25|ontology_enrichment_disease_v019=DOID:4929;1.28e-19;2!DOID:3119;4.27e-11;14!DOID:6193;1.10e-10;1!DOID:299;2.30e-09;25|ontology_enrichment_disease_v019_2=DOID:4929,1.55e-19,2;DOID:3119,5.28e-11,14;DOID:6193,1.21e-10,1;DOID:299,2.61e-09,25|ontology_enrichment_uberon=UBERON:0004921!1.33e-17!129;UBERON:0004185!1.33e-17!129;UBERON:0000077!1.15e-16!130;UBERON:0001041!2.51e-16!98;UBERON:0001007!3.74e-16!155;UBERON:0001555!3.74e-16!155;UBERON:0007026!3.74e-16!155;UBERON:0004119!3.34e-14!169;UBERON:0000925!3.34e-14!169;UBERON:0006595!3.34e-14!169;UBERON:0003104!1.02e-10!238;UBERON:0009142!1.02e-10!238;UBERON:0008947!5.08e-10!38;UBERON:0003258!5.08e-10!38;UBERON:0001737!7.26e-10!9;UBERON:0000072!8.34e-10!46;UBERON:0000065!1.26e-09!53;UBERON:0001557!1.85e-09!19;UBERON:0001004!7.32e-09!72;UBERON:0000058!1.26e-08!26;UBERON:0002294!2.39e-08!7;UBERON:0001173!2.39e-08!7;UBERON:0004912!2.39e-08!7;UBERON:0001048!2.88e-08!168;UBERON:0000466!3.30e-08!126;UBERON:0002394!4.42e-07!4;UBERON:0003928!4.42e-07!4;UBERON:0000464!7.91e-07!104|ontology_enrichment_uberon_v019=UBERON:0001041;1.47e-24;14!UBERON:0001829;8.91e-21;2!UBERON:0000945;8.34e-18;5!UBERON:0010039;8.34e-18;5!UBERON:0004921;9.89e-18;33!UBERON:0001044;1.89e-15;6!UBERON:0003293;1.89e-15;6!UBERON:0003294;1.89e-15;6!UBERON:0010047;1.89e-15;6!UBERON:0003408;1.89e-15;6!UBERON:0000167;1.89e-15;6!UBERON:0001723;2.06e-13;3!UBERON:0002114;2.06e-13;2!UBERON:0001033;2.06e-13;3!UBERON:0000165;6.12e-12;28!UBERON:0001736;2.53e-11;1!UBERON:0001831;3.24e-11;1!UBERON:0001567;3.24e-11;1!UBERON:0002372;1.10e-10;1!UBERON:0004913;1.10e-10;1!UBERON:0003703;1.10e-10;1!UBERON:0001961;1.10e-10;1!UBERON:0001744;1.10e-10;1!UBERON:0001042;1.10e-10;1!UBERON:0001735;1.10e-10;1!UBERON:0001174;1.10e-10;1!UBERON:0004914;1.10e-10;1!UBERON:0002394;2.72e-10;4!UBERON:0003928;2.72e-10;4!UBERON:0005409;3.43e-10;22!UBERON:0000058;4.26e-09;10!UBERON:0000161;1.99e-08;19!UBERON:0000166;1.99e-08;19!UBERON:0002108;2.08e-08;4!UBERON:0001555;2.28e-08;54|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.49e-21,2;UBERON:0001041,1.84e-16,87;UBERON:0004921,1.33e-15,118;UBERON:0001044,1.84e-15,6;UBERON:0003293,1.84e-15,6;UBERON:0003294,1.84e-15,6;UBERON:0010047,1.84e-15,6;UBERON:0000167,1.84e-15,6;UBERON:0000166,2.29e-15,22;UBERON:0001723,1.82e-13,3;UBERON:0001033,1.82e-13,3;UBERON:0010056,1.82e-13,3;UBERON:0002114,3.20e-13,2;UBERON:0000161,2.11e-12,36;UBERON:0001007,2.87e-12,145;UBERON:0001555,2.87e-12,145;UBERON:0007026,2.87e-12,145;UBERON:0000165,1.47e-11,29;UBERON:0000930,1.47e-11,29;UBERON:0001736,2.53e-11,1;UBERON:0006298,2.53e-11,1;UBERON:0000945,2.86e-11,8;UBERON:0010039,2.86e-11,8;UBERON:0001831,3.08e-11,1;UBERON:0001567,3.08e-11,1;UBERON:0008801,3.08e-11,1;UBERON:0004119,6.76e-11,160;UBERON:0000925,6.76e-11,160;UBERON:0006595,6.76e-11,160;UBERON:0002372,8.22e-11,1;UBERON:0001961,8.22e-11,1;UBERON:0001744,8.22e-11,1;UBERON:0001735,8.22e-11,1;UBERON:0004913,1.46e-10,1;UBERON:0003703,1.46e-10,1;UBERON:0001174,1.46e-10,1;UBERON:0004914,1.46e-10,1;UBERON:0003408,1.73e-09,10;UBERON:0001042,4.90e-09,10;UBERON:0009145,4.90e-09,10;UBERON:0005409,6.57e-09,25;UBERON:0002108,2.70e-08,4;UBERON:0006562,2.92e-08,11;UBERON:0001004,2.36e-07,74;UBERON:0002394,3.68e-07,6;UBERON:0003928,3.68e-07,6;UBERON:0011216,5.25e-07,223|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.591534000199219,0.168584690078102,0.241011029883482,0.110293972732394,0.653638332277218,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23677 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10826 | |||
|TSSclassifier=S | |||
|UniProt=Q9P0V3,C9JWW6 | |||
|association_with_transcript=0bp_to_ENST00000344528,ENST00000444916,ENST00000489601,uc002vvq.2_5end | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_9_at_SH3BP4_5end | |||
|id=chr2:235887339..235887353,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.00e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002178;3.20e-29;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,5.18e-29,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.53e-11;1!UBERON:0008801;3.24e-11;1!UBERON:0008425;4.15e-11;1!UBERON:0006595;2.28e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.72e-15!106;DOID:0050687!3.34e-11!143;DOID:299!2.05e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:4929;1.28e-19;2!DOID:3119;4.27e-11;14!DOID:6193;1.10e-10;1!DOID:299;2.30e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.55e-19,2;DOID:3119,5.28e-11,14;DOID:6193,1.21e-10,1;DOID:299,2.61e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.33e-17!129;UBERON:0004185!1.33e-17!129;UBERON:0000077!1.15e-16!130;UBERON:0001041!2.51e-16!98;UBERON:0001007!3.74e-16!155;UBERON:0001555!3.74e-16!155;UBERON:0007026!3.74e-16!155;UBERON:0004119!3.34e-14!169;UBERON:0000925!3.34e-14!169;UBERON:0006595!3.34e-14!169;UBERON:0003104!1.02e-10!238;UBERON:0009142!1.02e-10!238;UBERON:0008947!5.08e-10!38;UBERON:0003258!5.08e-10!38;UBERON:0001737!7.26e-10!9;UBERON:0000072!8.34e-10!46;UBERON:0000065!1.26e-09!53;UBERON:0001557!1.85e-09!19;UBERON:0001004!7.32e-09!72;UBERON:0000058!1.26e-08!26;UBERON:0002294!2.39e-08!7;UBERON:0001173!2.39e-08!7;UBERON:0004912!2.39e-08!7;UBERON:0001048!2.88e-08!168;UBERON:0000466!3.30e-08!126;UBERON:0002394!4.42e-07!4;UBERON:0003928!4.42e-07!4;UBERON:0000464!7.91e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;1.47e-24;14!UBERON:0001829;8.91e-21;2!UBERON:0000945;8.34e-18;5!UBERON:0010039;8.34e-18;5!UBERON:0004921;9.89e-18;33!UBERON:0001044;1.89e-15;6!UBERON:0003293;1.89e-15;6!UBERON:0003294;1.89e-15;6!UBERON:0010047;1.89e-15;6!UBERON:0003408;1.89e-15;6!UBERON:0000167;1.89e-15;6!UBERON:0001723;2.06e-13;3!UBERON:0002114;2.06e-13;2!UBERON:0001033;2.06e-13;3!UBERON:0000165;6.12e-12;28!UBERON:0001736;2.53e-11;1!UBERON:0001831;3.24e-11;1!UBERON:0001567;3.24e-11;1!UBERON:0002372;1.10e-10;1!UBERON:0004913;1.10e-10;1!UBERON:0003703;1.10e-10;1!UBERON:0001961;1.10e-10;1!UBERON:0001744;1.10e-10;1!UBERON:0001042;1.10e-10;1!UBERON:0001735;1.10e-10;1!UBERON:0001174;1.10e-10;1!UBERON:0004914;1.10e-10;1!UBERON:0002394;2.72e-10;4!UBERON:0003928;2.72e-10;4!UBERON:0005409;3.43e-10;22!UBERON:0000058;4.26e-09;10!UBERON:0000161;1.99e-08;19!UBERON:0000166;1.99e-08;19!UBERON:0002108;2.08e-08;4!UBERON:0001555;2.28e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.49e-21,2;UBERON:0001041,1.84e-16,87;UBERON:0004921,1.33e-15,118;UBERON:0001044,1.84e-15,6;UBERON:0003293,1.84e-15,6;UBERON:0003294,1.84e-15,6;UBERON:0010047,1.84e-15,6;UBERON:0000167,1.84e-15,6;UBERON:0000166,2.29e-15,22;UBERON:0001723,1.82e-13,3;UBERON:0001033,1.82e-13,3;UBERON:0010056,1.82e-13,3;UBERON:0002114,3.20e-13,2;UBERON:0000161,2.11e-12,36;UBERON:0001007,2.87e-12,145;UBERON:0001555,2.87e-12,145;UBERON:0007026,2.87e-12,145;UBERON:0000165,1.47e-11,29;UBERON:0000930,1.47e-11,29;UBERON:0001736,2.53e-11,1;UBERON:0006298,2.53e-11,1;UBERON:0000945,2.86e-11,8;UBERON:0010039,2.86e-11,8;UBERON:0001831,3.08e-11,1;UBERON:0001567,3.08e-11,1;UBERON:0008801,3.08e-11,1;UBERON:0004119,6.76e-11,160;UBERON:0000925,6.76e-11,160;UBERON:0006595,6.76e-11,160;UBERON:0002372,8.22e-11,1;UBERON:0001961,8.22e-11,1;UBERON:0001744,8.22e-11,1;UBERON:0001735,8.22e-11,1;UBERON:0004913,1.46e-10,1;UBERON:0003703,1.46e-10,1;UBERON:0001174,1.46e-10,1;UBERON:0004914,1.46e-10,1;UBERON:0003408,1.73e-09,10;UBERON:0001042,4.90e-09,10;UBERON:0009145,4.90e-09,10;UBERON:0005409,6.57e-09,25;UBERON:0002108,2.70e-08,4;UBERON:0006562,2.92e-08,11;UBERON:0001004,2.36e-07,74;UBERON:0002394,3.68e-07,6;UBERON:0003928,3.68e-07,6;UBERON:0011216,5.25e-07,223 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.591534000199219,0.168584690078102,0.241011029883482,0.110293972732394,0.653638332277218,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0.509752546090077,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0.293016358543788,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0.276283915531148,0,0,0,0,1.61763032065188,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,3.67331999984022,0.724999575434793,0.1137934482855,3.0510438035132,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0.230850775511391,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0.330991955875499,0,1.19472429772959,0,0,0,0.293977192243133,0,0.17472666824203,1.20390222730132,0,0.219267951258557,0.0821154570532092,0,0,0.225980740780532,0,0.19871461170299,0,0,0.320635281006135,0.85381197895741,2.39771531498556,1.00863292007874,0,0,4.46569873763264,0,0.471388069233591,0.135904206073614,0.523014231561666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0.704815022316672,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.734210113519403,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0,0,0.163771917510097,1.18284868973636,0,0,0,0,0,4.93431990171464,0,0,0,0,0,0,0,0.0887023701626388,0,0.857440047187092,0,0,0.354581522651905,0.111231401892069,2.27629969266491,0,0,0,0,0.47775168788705,0.142953088353313,0,0,0,0,0,0,0,8.17431981758527,0,0,0.423387050190929,0.68732060563215,0,0,0,3.53340841014875,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0.11294608203896,0,0.150962843566674,0.231522474323834,0,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,0,0,0,0.561689566824178,0,15.1380663523498,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0,0.0620747142958579,0.112131862580613,0,0,1.30630048738177,1.36893320434112,1.41439311330634,2.86888821570705,0.665320713092027,0,0,0,1.3473780315988,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p9@SH3BP4 | |||
}} |
Revision as of 17:33, 12 September 2013
Short description: | p9@SH3BP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SH3BP4_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000344528, ENST00000444916, ENST00000489601, uc002vvq.2_5end |
EntrezGene: | SH3BP4 |
HGNC: | 10826 |
UniProt: | Q9P0V3C9JWW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 5.18e-29 | 3 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.55e-19 | 2 |
gastrointestinal system cancer | 5.28e-11 | 14 |
epithelioid sarcoma | 1.21e-10 | 1 |
adenocarcinoma | 2.61e-09 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.