FFCP PHASE1:Mm9::chr10:84647881..84647906,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=880|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:84647881..84647906,+|id=chr10:84647881..84647906,+|ontology_enrichment_celltype=CL:0000838!1.16e-10!12;CL:0000063!1.65e-10!66;CL:0000084!8.07e-10!11;CL:0000827!8.07e-10!11;CL:0000542!1.87e-09!13;CL:0000051!1.87e-09!13;CL:0000988!4.02e-09!32;CL:0002032!4.02e-09!32;CL:0000037!4.02e-09!32;CL:0000566!4.02e-09!32;CL:0000837!4.02e-09!32;CL:0000791!4.10e-09!9;CL:0000789!4.10e-09!9;CL:0002420!4.10e-09!9;CL:0002419!4.10e-09!9;CL:0000790!4.10e-09!9;CL:0002563!2.49e-08!9;CL:0002251!2.49e-08!9;CL:0000624!3.20e-08!8;CL:0000738!1.56e-07!17;CL:0002087!1.56e-07!17|ontology_enrichment_celltype_v019_2=CL:0002563,4.55e-19,9;CL:0002251,4.55e-19,9;CL:0000791,2.80e-17,9;CL:0000789,2.80e-17,9;CL:0002420,2.80e-17,9;CL:0002419,2.80e-17,9;CL:0000790,2.80e-17,9;CL:0000838,7.15e-16,12;CL:0000624,5.11e-15,8;CL:0000066,6.76e-15,25;CL:0000542,1.67e-14,13;CL:0000051,1.67e-14,13;CL:0000084,7.48e-14,11;CL:0000827,7.48e-14,11;CL:0000988,1.32e-13,32;CL:0002032,1.32e-13,32;CL:0000037,1.32e-13,32;CL:0000837,1.32e-13,32;CL:0002076,1.91e-13,15;CL:0000738,3.63e-13,17;CL:0002087,3.63e-13,17;CL:0000239,4.68e-13,6;CL:0000677,4.68e-13,6;CL:0000584,4.68e-13,6;CL:0000223,6.47e-12,20;CL:0002031,9.28e-12,25;CL:0000075,4.29e-11,7;CL:0000893,1.95e-10,6;CL:0002489,1.95e-10,6;CL:0000898,1.95e-10,6;CL:0000809,1.95e-10,6;CL:0000810,1.95e-10,6;CL:0000895,1.95e-10,6;CL:0000808,1.95e-10,6;CL:0000894,1.95e-10,6;CL:0000806,1.95e-10,6;CL:0000807,1.95e-10,6;CL:0000805,1.95e-10,6;CL:0002425,1.95e-10,6;CL:0002436,1.95e-10,6;CL:0002427,1.95e-10,6;CL:0002428,1.95e-10,6;CL:0002429,1.95e-10,6;CL:0002433,1.95e-10,6;CL:0002431,1.95e-10,6;CL:0002432,1.95e-10,6;CL:0002320,7.50e-10,46;CL:0000134,7.50e-10,46;CL:0000219,7.65e-08,54;CL:0002250,1.38e-07,3;CL:0000034,1.42e-07,97;CL:0000682,5.18e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000485!2.58e-09!11;UBERON:0003350!2.49e-08!9;UBERON:0004808!2.49e-08!9;UBERON:0001277!2.49e-08!9;UBERON:0002370!4.38e-08!23;UBERON:0000974!4.38e-08!23;UBERON:0004807!4.38e-08!23;UBERON:0005058!4.38e-08!23;UBERON:0003351!4.38e-08!23;UBERON:0009113!4.38e-08!23;UBERON:0003295!4.38e-08!23;UBERON:0009722!4.38e-08!23;UBERON:0005562!4.38e-08!23;UBERON:0007690!4.38e-08!23;UBERON:0004177!6.23e-08!29;UBERON:0000490!7.14e-08!66;UBERON:0002390!1.18e-07!45;UBERON:0003061!1.18e-07!45;UBERON:0006562!1.75e-07!24;UBERON:0003408!1.75e-07!24;UBERON:0001557!1.75e-07!24;UBERON:0001042!1.75e-07!24;UBERON:0008814!1.75e-07!24;UBERON:0009145!1.75e-07!24;UBERON:0002193!2.82e-07!48;UBERON:0003929!4.25e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.55e-19,9;UBERON:0004808,4.55e-19,9;UBERON:0001277,4.55e-19,9;UBERON:0000485,2.73e-15,11;UBERON:0001242,1.12e-12,13;UBERON:0001262,1.12e-12,13;UBERON:0004786,1.12e-12,13;UBERON:0003929,6.63e-11,55;UBERON:0000344,9.24e-11,15;UBERON:0000490,1.32e-10,66;UBERON:0002384,7.50e-10,46;UBERON:0005911,8.36e-08,69|phase1_expression=0.640595388419176,2.44282785347553,1.36499771816861,2.11724947914781,2.50447864973174,2.18243053485457,1.16806320297763,6.19791952519566,5.91312633037,3.7450324211519,2.05461561870606,0.8774937489487,3.42401459862411,4.72070173062586,0,0,0.699561878128147,1.26184866143295,0,1.69755860719212,0,0.297872853602656,0.261199789138935,0,0,1.72269589234506,1.7230479846363,1.07735616342945,0,0,0,0,0,0,1.44425809875637,2.32728503501889,3.06254034393554,2.51118978442145,0.7813353445238,1.0470474879476,9.41170380849623,2.04913645487534,3.88408282424923,0.125896817975577,0,0,0,0,0,0,0,0,3.02008690903925,5.07753499407941,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,7.8263411949453,0,0,0,0,0,0,0,0,0,0.422530259330042,0,2.54805239706646,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0,0.662524555381181,0,0,0,0,0,0.958520996047362,4.19931911695385,0.889491589511453,0,0,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,1.13665399758237,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0,0,0,0,0,0,0,0.144649058581512,3.01582567878545,0,0,0.275936746304732,0,0,0,1.00988370881749,0,0,0.215423397732799,0,0,0,0,0,0.790575555893047,0,0,0.178065603667255,0.162886959353576,0,0,0.24278063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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=880 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:84647881..84647906,+ | |||
|id=chr10:84647881..84647906,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.16e-10!12;CL:0000063!1.65e-10!66;CL:0000084!8.07e-10!11;CL:0000827!8.07e-10!11;CL:0000542!1.87e-09!13;CL:0000051!1.87e-09!13;CL:0000988!4.02e-09!32;CL:0002032!4.02e-09!32;CL:0000037!4.02e-09!32;CL:0000566!4.02e-09!32;CL:0000837!4.02e-09!32;CL:0000791!4.10e-09!9;CL:0000789!4.10e-09!9;CL:0002420!4.10e-09!9;CL:0002419!4.10e-09!9;CL:0000790!4.10e-09!9;CL:0002563!2.49e-08!9;CL:0002251!2.49e-08!9;CL:0000624!3.20e-08!8;CL:0000738!1.56e-07!17;CL:0002087!1.56e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.55e-19,9;CL:0002251,4.55e-19,9;CL:0000791,2.80e-17,9;CL:0000789,2.80e-17,9;CL:0002420,2.80e-17,9;CL:0002419,2.80e-17,9;CL:0000790,2.80e-17,9;CL:0000838,7.15e-16,12;CL:0000624,5.11e-15,8;CL:0000066,6.76e-15,25;CL:0000542,1.67e-14,13;CL:0000051,1.67e-14,13;CL:0000084,7.48e-14,11;CL:0000827,7.48e-14,11;CL:0000988,1.32e-13,32;CL:0002032,1.32e-13,32;CL:0000037,1.32e-13,32;CL:0000837,1.32e-13,32;CL:0002076,1.91e-13,15;CL:0000738,3.63e-13,17;CL:0002087,3.63e-13,17;CL:0000239,4.68e-13,6;CL:0000677,4.68e-13,6;CL:0000584,4.68e-13,6;CL:0000223,6.47e-12,20;CL:0002031,9.28e-12,25;CL:0000075,4.29e-11,7;CL:0000893,1.95e-10,6;CL:0002489,1.95e-10,6;CL:0000898,1.95e-10,6;CL:0000809,1.95e-10,6;CL:0000810,1.95e-10,6;CL:0000895,1.95e-10,6;CL:0000808,1.95e-10,6;CL:0000894,1.95e-10,6;CL:0000806,1.95e-10,6;CL:0000807,1.95e-10,6;CL:0000805,1.95e-10,6;CL:0002425,1.95e-10,6;CL:0002436,1.95e-10,6;CL:0002427,1.95e-10,6;CL:0002428,1.95e-10,6;CL:0002429,1.95e-10,6;CL:0002433,1.95e-10,6;CL:0002431,1.95e-10,6;CL:0002432,1.95e-10,6;CL:0002320,7.50e-10,46;CL:0000134,7.50e-10,46;CL:0000219,7.65e-08,54;CL:0002250,1.38e-07,3;CL:0000034,1.42e-07,97;CL:0000682,5.18e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!2.58e-09!11;UBERON:0003350!2.49e-08!9;UBERON:0004808!2.49e-08!9;UBERON:0001277!2.49e-08!9;UBERON:0002370!4.38e-08!23;UBERON:0000974!4.38e-08!23;UBERON:0004807!4.38e-08!23;UBERON:0005058!4.38e-08!23;UBERON:0003351!4.38e-08!23;UBERON:0009113!4.38e-08!23;UBERON:0003295!4.38e-08!23;UBERON:0009722!4.38e-08!23;UBERON:0005562!4.38e-08!23;UBERON:0007690!4.38e-08!23;UBERON:0004177!6.23e-08!29;UBERON:0000490!7.14e-08!66;UBERON:0002390!1.18e-07!45;UBERON:0003061!1.18e-07!45;UBERON:0006562!1.75e-07!24;UBERON:0003408!1.75e-07!24;UBERON:0001557!1.75e-07!24;UBERON:0001042!1.75e-07!24;UBERON:0008814!1.75e-07!24;UBERON:0009145!1.75e-07!24;UBERON:0002193!2.82e-07!48;UBERON:0003929!4.25e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.55e-19,9;UBERON:0004808,4.55e-19,9;UBERON:0001277,4.55e-19,9;UBERON:0000485,2.73e-15,11;UBERON:0001242,1.12e-12,13;UBERON:0001262,1.12e-12,13;UBERON:0004786,1.12e-12,13;UBERON:0003929,6.63e-11,55;UBERON:0000344,9.24e-11,15;UBERON:0000490,1.32e-10,66;UBERON:0002384,7.50e-10,46;UBERON:0005911,8.36e-08,69 | |||
|phase1_expression=0.640595388419176,2.44282785347553,1.36499771816861,2.11724947914781,2.50447864973174,2.18243053485457,1.16806320297763,6.19791952519566,5.91312633037,3.7450324211519,2.05461561870606,0.8774937489487,3.42401459862411,4.72070173062586,0,0,0.699561878128147,1.26184866143295,0,1.69755860719212,0,0.297872853602656,0.261199789138935,0,0,1.72269589234506,1.7230479846363,1.07735616342945,0,0,0,0,0,0,1.44425809875637,2.32728503501889,3.06254034393554,2.51118978442145,0.7813353445238,1.0470474879476,9.41170380849623,2.04913645487534,3.88408282424923,0.125896817975577,0,0,0,0,0,0,0,0,3.02008690903925,5.07753499407941,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,7.8263411949453,0,0,0,0,0,0,0,0,0,0.422530259330042,0,2.54805239706646,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0,0.662524555381181,0,0,0,0,0,0.958520996047362,4.19931911695385,0.889491589511453,0,0,0,0,0,0.20778804455956,0,0,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,1.13665399758237,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0,0,0,0,0,0,0,0.144649058581512,3.01582567878545,0,0,0.275936746304732,0,0,0,1.00988370881749,0,0,0.215423397732799,0,0,0,0,0,0.790575555893047,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0.178368817602071,0.164549020602121,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0.679913719975421,1.6794174278839,1.38199973804424,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0.314578033277133,0,0,1.26404448251271,0,0.102710957164827,0,0,0.39736270956253,0.600977247599844,0.295379054349154,0.706765149637033,0.457240839929999,0.403304740547362,0.292373642219257,0.577271049841977,1.05189211963412,0,0,0.179427713218951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr10:84647881..84647906,+ | |||
}} |
Revision as of 17:48, 12 September 2013
Short description: | p@chr10:84647881..84647906, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:84647881..84647906, + |
Coexpression cluster: | MCL_coexpression_mm9:880 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.55e-19 | 9 |
gastrointestinal system epithelium | 4.55e-19 | 9 |
intestinal epithelium | 4.55e-19 | 9 |
simple columnar epithelium | 2.73e-15 | 11 |
intestinal mucosa | 1.12e-12 | 13 |
wall of intestine | 1.12e-12 | 13 |
gastrointestinal system mucosa | 1.12e-12 | 13 |
gut epithelium | 6.63e-11 | 55 |
mucosa | 9.24e-11 | 15 |
unilaminar epithelium | 1.32e-10 | 66 |
connective tissue | 7.50e-10 | 46 |
endo-epithelium | 8.36e-08 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.