FFCP PHASE1:Hg19::chr2:242312343..242312376,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9855|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16460|TSSclassifier=S|UniProt=C9JWM9|association_with_transcript=79bp_to_ENST00000445489_5end|coexpression_cluster_id=C133|description=CAGE_peak_4_at_FARP2_5end|id=chr2:242312343..242312376,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000575;1.37e-13;2|ontology_enrichment_celltype_v019_2=CL:0000575,1.55e-13,2|ontology_enrichment_development_v019=UBERON:0006241;1.35e-09;3!UBERON:0003057;1.35e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3493;6.43e-14;2|ontology_enrichment_disease_v019_2=DOID:3493,6.43e-14,2|ontology_enrichment_uberon=UBERON:0007023!1.12e-19!115;UBERON:0002240!2.34e-10!3;UBERON:0003076!5.46e-09!15;UBERON:0003057!5.46e-09!15;UBERON:0005743!9.18e-09!86;UBERON:0000073!2.15e-08!94;UBERON:0001016!2.15e-08!94;UBERON:0001017!2.45e-08!82;UBERON:0003075!4.47e-08!86;UBERON:0007284!4.47e-08!86;UBERON:0002346!1.61e-07!90;UBERON:0001049!2.18e-07!57;UBERON:0005068!2.18e-07!57;UBERON:0006241!2.18e-07!57;UBERON:0007135!2.18e-07!57;UBERON:0002360!7.10e-07!2;UBERON:0000094!7.10e-07!2;UBERON:0007645!7.10e-07!2|ontology_enrichment_uberon_v019=UBERON:0007029;3.15e-26;1!UBERON:0002108;7.35e-21;4!UBERON:0000160;4.45e-13;17!UBERON:0005409;2.19e-10;22!UBERON:0002114;1.14e-09;2!UBERON:0002240;1.35e-09;3!UBERON:0005174;1.35e-09;3!UBERON:0001137;1.35e-09;3!UBERON:0001896;1.67e-09;3!UBERON:0005290;1.67e-09;3!UBERON:0000014;1.44e-07;4!UBERON:0000964;1.92e-07;4!UBERON:0010409;1.92e-07;4!UBERON:0000922;8.85e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.78e-26,1;UBERON:0002108,8.13e-21,4;UBERON:0000160,4.45e-13,17;UBERON:0002114,1.19e-09,2;UBERON:0002240,1.30e-09,3;UBERON:0005174,1.30e-09,3;UBERON:0001137,1.30e-09,3;UBERON:0001896,1.67e-09,3;UBERON:0005290,1.67e-09,3;UBERON:0010096,1.67e-09,3;UBERON:0005409,2.91e-09,25;UBERON:0000014,1.40e-07,4;UBERON:0003076,1.49e-07,15;UBERON:0003057,1.49e-07,15;UBERON:0000964,2.04e-07,4;UBERON:0010409,2.04e-07,4;UBERON:0004348,2.04e-07,4;UBERON:0005427,2.04e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,1.83309043480088,0.296521128680622,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0.670869375198532,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33114861844223,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0,0.428859265059938,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4328981967376,0,0,0,3.88568794447312,0,0,0,0,0,0,2.46957305945423,0.874238242015829,0,0,0,0.981542335574726,0.891139200981258,2.5359343655004,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.436350690340377,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0.803892390468535,0,0,0.426467963801962,0,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0,0.653150243690884,0,0.673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p4@FARP2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9855 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16460 | |||
|TSSclassifier=S | |||
|UniProt=C9JWM9 | |||
|association_with_transcript=79bp_to_ENST00000445489_5end | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_4_at_FARP2_5end | |||
|id=chr2:242312343..242312376,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000575;1.37e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.55e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.35e-09;3!UBERON:0003057;1.35e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;6.43e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.43e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-19!115;UBERON:0002240!2.34e-10!3;UBERON:0003076!5.46e-09!15;UBERON:0003057!5.46e-09!15;UBERON:0005743!9.18e-09!86;UBERON:0000073!2.15e-08!94;UBERON:0001016!2.15e-08!94;UBERON:0001017!2.45e-08!82;UBERON:0003075!4.47e-08!86;UBERON:0007284!4.47e-08!86;UBERON:0002346!1.61e-07!90;UBERON:0001049!2.18e-07!57;UBERON:0005068!2.18e-07!57;UBERON:0006241!2.18e-07!57;UBERON:0007135!2.18e-07!57;UBERON:0002360!7.10e-07!2;UBERON:0000094!7.10e-07!2;UBERON:0007645!7.10e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;3.15e-26;1!UBERON:0002108;7.35e-21;4!UBERON:0000160;4.45e-13;17!UBERON:0005409;2.19e-10;22!UBERON:0002114;1.14e-09;2!UBERON:0002240;1.35e-09;3!UBERON:0005174;1.35e-09;3!UBERON:0001137;1.35e-09;3!UBERON:0001896;1.67e-09;3!UBERON:0005290;1.67e-09;3!UBERON:0000014;1.44e-07;4!UBERON:0000964;1.92e-07;4!UBERON:0010409;1.92e-07;4!UBERON:0000922;8.85e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.78e-26,1;UBERON:0002108,8.13e-21,4;UBERON:0000160,4.45e-13,17;UBERON:0002114,1.19e-09,2;UBERON:0002240,1.30e-09,3;UBERON:0005174,1.30e-09,3;UBERON:0001137,1.30e-09,3;UBERON:0001896,1.67e-09,3;UBERON:0005290,1.67e-09,3;UBERON:0010096,1.67e-09,3;UBERON:0005409,2.91e-09,25;UBERON:0000014,1.40e-07,4;UBERON:0003076,1.49e-07,15;UBERON:0003057,1.49e-07,15;UBERON:0000964,2.04e-07,4;UBERON:0010409,2.04e-07,4;UBERON:0004348,2.04e-07,4;UBERON:0005427,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,1.83309043480088,0.296521128680622,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0.670869375198532,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33114861844223,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0,0.428859265059938,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4328981967376,0,0,0,3.88568794447312,0,0,0,0,0,0,2.46957305945423,0.874238242015829,0,0,0,0.981542335574726,0.891139200981258,2.5359343655004,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.436350690340377,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0.803892390468535,0,0,0.426467963801962,0,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0,0.653150243690884,0,0.673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@FARP2 | |||
}} |
Revision as of 17:51, 12 September 2013
Short description: | p4@FARP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FARP2_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | 79bp_to_ENST00000445489_5end |
EntrezGene: | FARP2 |
HGNC: | 16460 |
UniProt: | C9JWM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.55e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
surface | 2.78e-26 | 1 |
small intestine | 8.13e-21 | 4 |
intestine | 4.45e-13 | 17 |
duodenum | 1.19e-09 | 2 |
spinal cord | 1.30e-09 | 3 |
dorsal region element | 1.30e-09 | 3 |
dorsum | 1.30e-09 | 3 |
medulla oblongata | 1.67e-09 | 3 |
myelencephalon | 1.67e-09 | 3 |
future myelencephalon | 1.67e-09 | 3 |
gastrointestinal system | 2.91e-09 | 25 |
zone of skin | 1.40e-07 | 4 |
posterior neural tube | 1.49e-07 | 15 |
chordal neural plate | 1.49e-07 | 15 |
cornea | 2.04e-07 | 4 |
eye surface | 2.04e-07 | 4 |
optic eminence | 2.04e-07 | 4 |
corneal primordium | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.43e-14 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.