FFCP PHASE1:Hg19::chr2:70166128..70166141,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4084|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=6761|TSSclassifier=S|UniProt=|association_with_transcript=-122bp_to_BC051693_5end|coexpression_cluster_id=C13|description=CAGE_peak_9_at_MXD1_5end|id=chr2:70166128..70166141,+|ontology_enrichment_celltype=CL:0002057!4.25e-27!42;CL:0000860!2.83e-26!45;CL:0000766!6.91e-24!76;CL:0002194!7.53e-21!63;CL:0000576!7.53e-21!63;CL:0000040!7.53e-21!63;CL:0000559!7.53e-21!63;CL:0002009!7.92e-21!65;CL:0000839!2.01e-18!70;CL:0000557!5.81e-18!71;CL:0000763!1.75e-17!112;CL:0000049!1.75e-17!112;CL:0000738!4.93e-12!140;CL:0000037!6.05e-10!172;CL:0000566!6.05e-10!172;CL:0002087!1.42e-09!119;CL:0002032!2.23e-09!165;CL:0000837!2.23e-09!165;CL:0002031!2.78e-08!124;CL:0000988!4.42e-08!182;CL:0000094!1.09e-07!8|ontology_enrichment_celltype_v019=CL:0000860;1.21e-76;33!CL:0002057;1.21e-76;33!CL:0000473;2.09e-57;39!CL:0000234;2.09e-57;39!CL:0000576;1.67e-35;48!CL:0000766;3.07e-24;69!CL:0000763;3.09e-15;100!CL:0000775;1.99e-13;3!CL:0000094;6.70e-13;8!CL:0000081;2.81e-09;11!CL:0000771;3.71e-09;2!CL:0002087;5.35e-09;104!CL:0000738;1.47e-08;136|ontology_enrichment_celltype_v019_2=CL:0000860,8.40e-66,42;CL:0002057,8.40e-66,42;CL:0000473,2.93e-61,48;CL:0000234,2.93e-61,48;CL:0000766,2.42e-54,72;CL:0002194,1.54e-47,59;CL:0000576,1.54e-47,59;CL:0000040,1.54e-47,59;CL:0000559,1.54e-47,59;CL:0002009,9.10e-46,61;CL:0000839,8.36e-42,66;CL:0000557,4.41e-41,67;CL:0000763,1.23e-33,108;CL:0000049,1.23e-33,108;CL:0000738,4.59e-25,136;CL:0002087,4.41e-21,115;CL:0002032,6.32e-20,161;CL:0000837,6.32e-20,161;CL:0002031,6.48e-20,120;CL:0000037,9.23e-19,168;CL:0000988,2.12e-17,177;CL:0000775,2.12e-13,3;CL:0000094,6.48e-13,8;CL:0000081,2.74e-09,11;CL:0000771,3.29e-09,2|ontology_enrichment_development_v019=CL:0002057;7.84e-49;42!CL:0000049;1.63e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.49e-19!102;UBERON:0003061!3.49e-19!102;UBERON:0002193!7.85e-19!112;UBERON:0001474!2.44e-16!86;UBERON:0002371!5.32e-16!80;UBERON:0002405!1.57e-11!115;UBERON:0004765!2.16e-11!101;UBERON:0001434!2.16e-11!101|ontology_enrichment_uberon_v019=UBERON:0000178;6.88e-12;15!UBERON:0000179;6.88e-12;15!UBERON:0000463;6.88e-12;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.11e-42,98;UBERON:0003061,1.11e-42,98;UBERON:0002193,5.71e-38,108;UBERON:0002371,2.00e-35,76;UBERON:0001474,2.45e-32,82;UBERON:0004765,7.45e-29,90;UBERON:0002405,1.06e-27,93;UBERON:0001434,2.79e-25,100;UBERON:0003081,2.74e-16,203;UBERON:0002204,1.34e-14,167;UBERON:0000178,6.22e-12,15;UBERON:0000179,6.22e-12,15;UBERON:0000463,6.22e-12,15;UBERON:0000926,1.06e-09,315;UBERON:0004120,1.06e-09,315;UBERON:0006603,1.06e-09,315|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0,0.293600439334847,0.553995408531877,0.601633342410425,0.868043482863407,0,0,0.257575567634187,2.32637182047304,1.13362783106643,1.4555043671269,1.39457422143411,0.822335776043652,2.47765096716083,6.61692502340946,2.30544635876191,0.709446689665756,4.48169384957604,1.29096936716765,2.70852973188684,4.1413314699373,3.27487380069415,1.57306439111559,12.549439587207,5.45579346029359,8.95071976118658,1.9791078011203,1.59570926097305,2.13112375266347,9.28669563611469,5.6738522469114,4.35975574296902,2.26123798731069,2.08593167368081,1.08594422352558,6.65939452896706,2.94622108790052,1.89877432464531,0.211255286311942,0.212604299965044,0,0.44931452458598,0.901061357049038,0.64290234678832,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0,0.25618263945135,0.390178042679635,0.164437904603676,0,0,0.296573126324121,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0.364295288292542,0.370784442784429,0,0.522389211897802,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0.81014194788176,0,0,0,0,0,0,2.63560834872127,15.511210565933,0,0,0.506522046658319,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0.502257091432126,6.325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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4084 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6761 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-122bp_to_BC051693_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_9_at_MXD1_5end | |||
|id=chr2:70166128..70166141,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.25e-27!42;CL:0000860!2.83e-26!45;CL:0000766!6.91e-24!76;CL:0002194!7.53e-21!63;CL:0000576!7.53e-21!63;CL:0000040!7.53e-21!63;CL:0000559!7.53e-21!63;CL:0002009!7.92e-21!65;CL:0000839!2.01e-18!70;CL:0000557!5.81e-18!71;CL:0000763!1.75e-17!112;CL:0000049!1.75e-17!112;CL:0000738!4.93e-12!140;CL:0000037!6.05e-10!172;CL:0000566!6.05e-10!172;CL:0002087!1.42e-09!119;CL:0002032!2.23e-09!165;CL:0000837!2.23e-09!165;CL:0002031!2.78e-08!124;CL:0000988!4.42e-08!182;CL:0000094!1.09e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-76;33!CL:0002057;1.21e-76;33!CL:0000473;2.09e-57;39!CL:0000234;2.09e-57;39!CL:0000576;1.67e-35;48!CL:0000766;3.07e-24;69!CL:0000763;3.09e-15;100!CL:0000775;1.99e-13;3!CL:0000094;6.70e-13;8!CL:0000081;2.81e-09;11!CL:0000771;3.71e-09;2!CL:0002087;5.35e-09;104!CL:0000738;1.47e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.40e-66,42;CL:0002057,8.40e-66,42;CL:0000473,2.93e-61,48;CL:0000234,2.93e-61,48;CL:0000766,2.42e-54,72;CL:0002194,1.54e-47,59;CL:0000576,1.54e-47,59;CL:0000040,1.54e-47,59;CL:0000559,1.54e-47,59;CL:0002009,9.10e-46,61;CL:0000839,8.36e-42,66;CL:0000557,4.41e-41,67;CL:0000763,1.23e-33,108;CL:0000049,1.23e-33,108;CL:0000738,4.59e-25,136;CL:0002087,4.41e-21,115;CL:0002032,6.32e-20,161;CL:0000837,6.32e-20,161;CL:0002031,6.48e-20,120;CL:0000037,9.23e-19,168;CL:0000988,2.12e-17,177;CL:0000775,2.12e-13,3;CL:0000094,6.48e-13,8;CL:0000081,2.74e-09,11;CL:0000771,3.29e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.84e-49;42!CL:0000049;1.63e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.49e-19!102;UBERON:0003061!3.49e-19!102;UBERON:0002193!7.85e-19!112;UBERON:0001474!2.44e-16!86;UBERON:0002371!5.32e-16!80;UBERON:0002405!1.57e-11!115;UBERON:0004765!2.16e-11!101;UBERON:0001434!2.16e-11!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.88e-12;15!UBERON:0000179;6.88e-12;15!UBERON:0000463;6.88e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.11e-42,98;UBERON:0003061,1.11e-42,98;UBERON:0002193,5.71e-38,108;UBERON:0002371,2.00e-35,76;UBERON:0001474,2.45e-32,82;UBERON:0004765,7.45e-29,90;UBERON:0002405,1.06e-27,93;UBERON:0001434,2.79e-25,100;UBERON:0003081,2.74e-16,203;UBERON:0002204,1.34e-14,167;UBERON:0000178,6.22e-12,15;UBERON:0000179,6.22e-12,15;UBERON:0000463,6.22e-12,15;UBERON:0000926,1.06e-09,315;UBERON:0004120,1.06e-09,315;UBERON:0006603,1.06e-09,315 | |||
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| |||
|short_description=p9@MXD1 | |||
}} |
Revision as of 19:33, 12 September 2013
Short description: | p9@MXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_MXD1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -122bp_to_BC051693_5end |
EntrezGene: | MXD1 |
HGNC: | 6761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.40e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.40e-66 | 42 |
defensive cell | 2.93e-61 | 48 |
phagocyte | 2.93e-61 | 48 |
myeloid leukocyte | 2.42e-54 | 72 |
monopoietic cell | 1.54e-47 | 59 |
monocyte | 1.54e-47 | 59 |
monoblast | 1.54e-47 | 59 |
promonocyte | 1.54e-47 | 59 |
macrophage dendritic cell progenitor | 9.10e-46 | 61 |
myeloid lineage restricted progenitor cell | 8.36e-42 | 66 |
granulocyte monocyte progenitor cell | 4.41e-41 | 67 |
myeloid cell | 1.23e-33 | 108 |
common myeloid progenitor | 1.23e-33 | 108 |
leukocyte | 4.59e-25 | 136 |
nongranular leukocyte | 4.41e-21 | 115 |
hematopoietic oligopotent progenitor cell | 6.32e-20 | 161 |
hematopoietic multipotent progenitor cell | 6.32e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 6.48e-20 | 120 |
hematopoietic stem cell | 9.23e-19 | 168 |
hematopoietic cell | 2.12e-17 | 177 |
neutrophil | 2.12e-13 | 3 |
granulocyte | 6.48e-13 | 8 |
blood cell | 2.74e-09 | 11 |
eosinophil | 3.29e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.11e-42 | 98 |
blood island | 1.11e-42 | 98 |
hemolymphoid system | 5.71e-38 | 108 |
bone marrow | 2.00e-35 | 76 |
bone element | 2.45e-32 | 82 |
skeletal element | 7.45e-29 | 90 |
immune system | 1.06e-27 | 93 |
skeletal system | 2.79e-25 | 100 |
lateral plate mesoderm | 2.74e-16 | 203 |
musculoskeletal system | 1.34e-14 | 167 |
blood | 6.22e-12 | 15 |
haemolymphatic fluid | 6.22e-12 | 15 |
organism substance | 6.22e-12 | 15 |
mesoderm | 1.06e-09 | 315 |
mesoderm-derived structure | 1.06e-09 | 315 |
presumptive mesoderm | 1.06e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.