FFCP PHASE1:Hg19::chr2:85938730..85938740,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C95|description=CAGE_peak_at_chr2:85938730..85938740,+|id=chr2:85938730..85938740,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007123;2.22e-27;5!UBERON:0008947;5.14e-11;29!UBERON:0001041;1.13e-10;30|ontology_enrichment_disease=DOID:114!1.54e-07!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002171!3.08e-14!1;UBERON:0006518!3.08e-14!1;UBERON:0008949!3.08e-14!1;UBERON:0000101!3.08e-14!1;UBERON:0002167!3.08e-14!1;UBERON:0002046!3.54e-11!5;UBERON:0004117!3.54e-11!5;UBERON:0007689!3.54e-11!5;UBERON:0007123!3.54e-11!5;UBERON:0003091!3.54e-11!5;UBERON:0007023!1.44e-09!115;UBERON:0000007!1.45e-07!2;UBERON:0002148!1.75e-07!2;UBERON:0009662!1.75e-07!2;UBERON:0002298!4.99e-07!8|ontology_enrichment_uberon_v019=UBERON:0002171;1.84e-34;1!UBERON:0006518;1.84e-34;1!UBERON:0008949;1.84e-34;1!UBERON:0000101;1.84e-34;1!UBERON:0002167;1.84e-34;1!UBERON:0002046;2.22e-27;5!UBERON:0002048;2.85e-14;22!UBERON:0000117;2.85e-14;22!UBERON:0000171;2.85e-14;22!UBERON:0000170;2.85e-14;22!UBERON:0005178;1.50e-08;34!UBERON:0002224;1.50e-08;34!UBERON:0000065;5.83e-07;44!UBERON:0005181;7.47e-07;35|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.84e-34,1;UBERON:0006518,1.84e-34,1;UBERON:0008949,1.84e-34,1;UBERON:0000101,1.84e-34,1;UBERON:0002167,1.84e-34,1;UBERON:0002046,2.38e-27,5;UBERON:0004117,2.38e-27,5;UBERON:0007689,2.38e-27,5;UBERON:0007123,2.38e-27,5;UBERON:0003091,2.38e-27,5;UBERON:0002048,2.73e-14,22;UBERON:0000117,2.73e-14,22;UBERON:0000171,2.73e-14,22;UBERON:0000170,2.73e-14,22;UBERON:0005597,2.73e-14,22;UBERON:0000118,2.73e-14,22;UBERON:0009722,4.80e-13,11;UBERON:0007690,4.80e-13,11;UBERON:0005911,1.51e-10,82;UBERON:0005178,1.62e-09,34;UBERON:0002224,1.62e-09,34;UBERON:0005181,2.89e-09,35;UBERON:0005153,8.39e-09,37;UBERON:0008947,1.37e-08,38;UBERON:0003258,1.37e-08,38;UBERON:0008814,2.33e-08,18;UBERON:0005157,4.50e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,1.70859860108311,2.35806457649499,4.97086866416635,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03670906490128,3.84022659020617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:85938730..85938740,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_at_chr2:85938730..85938740,+ | |||
|id=chr2:85938730..85938740,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.22e-27;5!UBERON:0008947;5.14e-11;29!UBERON:0001041;1.13e-10;30 | |||
|ontology_enrichment_disease=DOID:114!1.54e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!3.08e-14!1;UBERON:0006518!3.08e-14!1;UBERON:0008949!3.08e-14!1;UBERON:0000101!3.08e-14!1;UBERON:0002167!3.08e-14!1;UBERON:0002046!3.54e-11!5;UBERON:0004117!3.54e-11!5;UBERON:0007689!3.54e-11!5;UBERON:0007123!3.54e-11!5;UBERON:0003091!3.54e-11!5;UBERON:0007023!1.44e-09!115;UBERON:0000007!1.45e-07!2;UBERON:0002148!1.75e-07!2;UBERON:0009662!1.75e-07!2;UBERON:0002298!4.99e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.84e-34;1!UBERON:0006518;1.84e-34;1!UBERON:0008949;1.84e-34;1!UBERON:0000101;1.84e-34;1!UBERON:0002167;1.84e-34;1!UBERON:0002046;2.22e-27;5!UBERON:0002048;2.85e-14;22!UBERON:0000117;2.85e-14;22!UBERON:0000171;2.85e-14;22!UBERON:0000170;2.85e-14;22!UBERON:0005178;1.50e-08;34!UBERON:0002224;1.50e-08;34!UBERON:0000065;5.83e-07;44!UBERON:0005181;7.47e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.84e-34,1;UBERON:0006518,1.84e-34,1;UBERON:0008949,1.84e-34,1;UBERON:0000101,1.84e-34,1;UBERON:0002167,1.84e-34,1;UBERON:0002046,2.38e-27,5;UBERON:0004117,2.38e-27,5;UBERON:0007689,2.38e-27,5;UBERON:0007123,2.38e-27,5;UBERON:0003091,2.38e-27,5;UBERON:0002048,2.73e-14,22;UBERON:0000117,2.73e-14,22;UBERON:0000171,2.73e-14,22;UBERON:0000170,2.73e-14,22;UBERON:0005597,2.73e-14,22;UBERON:0000118,2.73e-14,22;UBERON:0009722,4.80e-13,11;UBERON:0007690,4.80e-13,11;UBERON:0005911,1.51e-10,82;UBERON:0005178,1.62e-09,34;UBERON:0002224,1.62e-09,34;UBERON:0005181,2.89e-09,35;UBERON:0005153,8.39e-09,37;UBERON:0008947,1.37e-08,38;UBERON:0003258,1.37e-08,38;UBERON:0008814,2.33e-08,18;UBERON:0005157,4.50e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,1.70859860108311,2.35806457649499,4.97086866416635,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03670906490128,3.84022659020617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:85938730..85938740,+ | |||
}} |
Revision as of 20:02, 12 September 2013
Short description: | p@chr2:85938730..85938740, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:85938730..85938740, + |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.84e-34 | 1 |
right lung lobe | 1.84e-34 | 1 |
lower lobe of lung | 1.84e-34 | 1 |
lobe of lung | 1.84e-34 | 1 |
right lung | 1.84e-34 | 1 |
thyroid gland | 2.38e-27 | 5 |
pharyngeal pouch | 2.38e-27 | 5 |
thyroid diverticulum | 2.38e-27 | 5 |
pharyngeal pouch 2 | 2.38e-27 | 5 |
thyroid primordium | 2.38e-27 | 5 |
lung | 2.73e-14 | 22 |
respiratory tube | 2.73e-14 | 22 |
respiration organ | 2.73e-14 | 22 |
pair of lungs | 2.73e-14 | 22 |
lung primordium | 2.73e-14 | 22 |
lung bud | 2.73e-14 | 22 |
entire pharyngeal arch endoderm | 4.80e-13 | 11 |
early pharyngeal endoderm | 4.80e-13 | 11 |
endo-epithelium | 1.51e-10 | 82 |
thoracic cavity element | 1.62e-09 | 34 |
thoracic cavity | 1.62e-09 | 34 |
thoracic segment organ | 2.89e-09 | 35 |
epithelial bud | 8.39e-09 | 37 |
respiratory primordium | 1.37e-08 | 38 |
endoderm of foregut | 1.37e-08 | 38 |
pharyngeal arch system | 2.33e-08 | 18 |
epithelial fold | 4.50e-07 | 47 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.