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FFCP PHASE1:Mm9::chr11:5662047..5662056,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=72046|HGNC=|UniProt=Q5NCI0|association_with_transcript=317bp_to_ENSMUST00000120306_5end|description=CAGE_peak_6_at_Urgcp_5end|id=chr11:5662047..5662056,-|ontology_enrichment_celltype=CL:0000055!8.33e-11!50;CL:0000221!8.84e-10!44;CL:0000133!8.84e-10!44;CL:0002319!1.98e-09!43;CL:0000393!3.73e-09!39;CL:0000211!3.73e-09!39;CL:0000540!3.89e-07!33;CL:0000047!3.89e-07!33;CL:0000031!3.89e-07!33;CL:0000404!3.89e-07!33|ontology_enrichment_celltype_v019_2=CL:0002319,3.35e-11,43;CL:0000221,8.11e-11,44;CL:0000133,8.11e-11,44;CL:0000393,8.11e-10,39;CL:0000211,8.11e-10,39;CL:0002321,1.84e-09,70;CL:0002194,1.39e-07,4;CL:0000766,1.39e-07,4;CL:0000234,1.39e-07,4;CL:0000576,1.39e-07,4;CL:0000235,1.39e-07,4;CL:0000864,1.39e-07,4;CL:0002009,1.39e-07,4;CL:0000040,1.39e-07,4;CL:0000559,1.39e-07,4;CL:0000540,2.13e-07,33;CL:0000047,2.13e-07,33;CL:0000031,2.13e-07,33;CL:0000404,2.13e-07,33;CL:0000723,2.85e-07,91;CL:0000048,2.85e-07,91;CL:0002453,8.05e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.10e-13!73;UBERON:0005743!5.10e-13!73;UBERON:0000073!1.82e-12!75;UBERON:0001016!1.82e-12!75;UBERON:0004121!8.60e-12!102;UBERON:0000924!8.60e-12!102;UBERON:0006601!8.60e-12!102;UBERON:0002346!5.99e-08!71;UBERON:0003075!5.99e-08!71;UBERON:0007284!5.99e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.60e-11,73;UBERON:0001016,2.67e-10,75;UBERON:0004121,5.59e-08,95;UBERON:0000924,5.59e-08,95;UBERON:0006601,5.59e-08,95;UBERON:0000073,1.21e-07,54;UBERON:0002950,7.69e-07,4;UBERON:0001891,7.69e-07,4;UBERON:0009616,7.69e-07,4;UBERON:0010286,7.69e-07,4|phase1_expression=0.960893082628764,0.348975407639361,0,0.60492842261366,0.500895729946347,0.671517087647559,0.233612640595526,0.258246646883153,0.281577444303333,0.468129052643987,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,2.72138528483423,0.297872853602656,0.261199789138935,0.639969691173627,0.68822784320151,0,0,0.215471232685889,0,0.756090389279792,0.443461021310609,2.54012269383853,1.23012957516914,0,0,0,0,0,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0.971020706062307,1.6366586336825,1.21652317463417,1.10128051297009,2.34717403304412,0.436050312760893,1.75748946187577,1.36100929351998,0.699932108126813,1.43752564364972,0.167782606057736,1.45072428402269,0,0.771778308107841,0.573066879877513,1.54701627683233,0.606949382578793,0.528990979272033,0.633831403506179,1.35537812827653,0,0.899899717281399,0,0,1.49800055259202,1.92109152660777,0.311068836925433,0.135005938331691,0,2.28520787523043,1.10434270475807,0.122490799214954,0,0,2.20231761998777,0.893811366596314,3.07213066512487,0.923204014111357,0.731901148819277,1.04182674111352,1.11673199600552,2.8138130501584,2.75036845998258,1.76777151284201,1.70846016958924,0.559198337475902,0.151452386666368,0.377857800533928,0.289864488701678,0,0,0.539703191637817,0,0,0.702222100658759,1.1930122580464,0.779358013808606,1.7666978725517,0.985903938436763,2.56652954828636,0,0,0.432982082022428,0,1.01104889002957,0.68510327831436,0,0.445326417194474,1.04091196059682,0.304465478312141,0.461230994512117,0.452167921657868,0.823120949949934,1.0053327306374,0.494389935468748,1.15679485535929,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,1.8850203613211,0.255457055208591,0,0,0.381210681219194,1.3481157546434,0.915001205637253,0,1.04294592115366,0.255715457330331,1.87009240103604,0.811206315338788,0.916554274652847,0,0.505445516867349,1.26265113531884,0.650602214813519,0,0.360124259610698,0.452114453507145,0.544291993210623,1.2811372028485,0.374806898238915,0.517406741478031,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0.823128545631774,0.398068533636986,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0.493679549740441,0.656669856316381,0.891756905004413,1.02339991197733,0.878200461164203,0.671032093801859,0.210289948564127,0.205809224758569,0.330418782983798,0,0.426576501070468,0.232236671860439,0.38660238396628,0.605050573870028,0,0.380451252225118,0,0.164698954724011,0,0,0,0,0.432276099749388,0.199141273254367,0,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.561086559122548,0.569128834118316,0.442830443938806,0.31399745568275,0.616985819609003,0,0.333690211432188,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0.505157755894224,0,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0.469380496577004,0.837531287209079,0.476087281772027,0.585400943573396,0.315270288212382,0,0.318909537314974,0.491589944147214,0.518054945597687,0.289298117163023,6.03165135757089,4.35124547054968,0,0,0.80275294993896,0.703270119553219,0.163934945376675,0.252470927204373,0.631016438832513,0.780877488593277,1.07711698866399,1.67278158566786,0.891194696329576,0.849229592366497,2.42886421004937,2.33804686329049,1.18586333383957,0.642642632843614,1.41940085208269,0.712262414669021,0.488660878060728,0.494910368917606,0,0,0.302323556964751,0.943025398779491,0.295301892880773,1.84461088766356,0.258428293168221,1.09060118843252,0.712994756769443,0.316036757935816,0,0,1.36175842301515,0.720244376125241,0.776152102696527,0.428674070063185,1.06404140185364,0.713475270408282,0.493647061806363,0.608929898229199,0,0.63549621259146,0.441056796109924,0.49465875882444,0.645857706783622,0.120625849856312,0,0.164140899745061,0,0.927126510052548,0,0.82554747185289,0.185194527369712,0,0.27338845544205,0,0.169978429993855,0.559805809294632,0.138199973804424,0,0.474503990371703,0.813277868507395,0,0.418176592028937,0.218362563746178,0,0.495920734352016,0.26175594198403,0.259229946583586,0.621339313086926,3.38215763210514,0.448549638131936,0.827292452285488,0.388902376688095,0.387479470433193,2.02747350588934,0.469428954583016,0.39061315453185,0.734015410979976,0.724752362478018,2.01621004380506,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0.665957860122194,0.179427713218951,0.335769232728157,0.386379188064381,0.375364950902364,0.73260649706906,0.214368379079066,0.501572104035363,1.6942555278512,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,0,2.2516060161211,0.453142408984205,0,0.207574695168353,1.19707462020309,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,1.23621034343337,0.64183841918363,0.252697211763798,0.25347929989024,0.754505365544305,0.37456602987953,0.128050304809739,0.287177344778066,0,0.115884325944855,0.38581844092741,0,0.735994600671987,0.342869252385415,0.177475806159338,0.238436189947321,0.581385666529314,0.658765662907314,0.423073039458382,0.914639864363863,0.526139422875686,0.271608227691724,1.68342681497322,0.593175090620871,0.394017929502254,0.409231043169689,0.77468420592983,0.192906610981141,0.499621155875892,0,0,0.57386499620653,0,0.231867835620421|short_description=p6@Urgcp}}
|EntrezGene=72046
|HGNC=
|UniProt=Q5NCI0
|association_with_transcript=317bp_to_ENSMUST00000120306_5end
|description=CAGE_peak_6_at_Urgcp_5end
|id=chr11:5662047..5662056,-
|ontology_enrichment_celltype=CL:0000055!8.33e-11!50;CL:0000221!8.84e-10!44;CL:0000133!8.84e-10!44;CL:0002319!1.98e-09!43;CL:0000393!3.73e-09!39;CL:0000211!3.73e-09!39;CL:0000540!3.89e-07!33;CL:0000047!3.89e-07!33;CL:0000031!3.89e-07!33;CL:0000404!3.89e-07!33
|ontology_enrichment_celltype_v019_2=CL:0002319,3.35e-11,43;CL:0000221,8.11e-11,44;CL:0000133,8.11e-11,44;CL:0000393,8.11e-10,39;CL:0000211,8.11e-10,39;CL:0002321,1.84e-09,70;CL:0002194,1.39e-07,4;CL:0000766,1.39e-07,4;CL:0000234,1.39e-07,4;CL:0000576,1.39e-07,4;CL:0000235,1.39e-07,4;CL:0000864,1.39e-07,4;CL:0002009,1.39e-07,4;CL:0000040,1.39e-07,4;CL:0000559,1.39e-07,4;CL:0000540,2.13e-07,33;CL:0000047,2.13e-07,33;CL:0000031,2.13e-07,33;CL:0000404,2.13e-07,33;CL:0000723,2.85e-07,91;CL:0000048,2.85e-07,91;CL:0002453,8.05e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.10e-13!73;UBERON:0005743!5.10e-13!73;UBERON:0000073!1.82e-12!75;UBERON:0001016!1.82e-12!75;UBERON:0004121!8.60e-12!102;UBERON:0000924!8.60e-12!102;UBERON:0006601!8.60e-12!102;UBERON:0002346!5.99e-08!71;UBERON:0003075!5.99e-08!71;UBERON:0007284!5.99e-08!71
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.60e-11,73;UBERON:0001016,2.67e-10,75;UBERON:0004121,5.59e-08,95;UBERON:0000924,5.59e-08,95;UBERON:0006601,5.59e-08,95;UBERON:0000073,1.21e-07,54;UBERON:0002950,7.69e-07,4;UBERON:0001891,7.69e-07,4;UBERON:0009616,7.69e-07,4;UBERON:0010286,7.69e-07,4
|phase1_expression=0.960893082628764,0.348975407639361,0,0.60492842261366,0.500895729946347,0.671517087647559,0.233612640595526,0.258246646883153,0.281577444303333,0.468129052643987,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,2.72138528483423,0.297872853602656,0.261199789138935,0.639969691173627,0.68822784320151,0,0,0.215471232685889,0,0.756090389279792,0.443461021310609,2.54012269383853,1.23012957516914,0,0,0,0,0,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0.971020706062307,1.6366586336825,1.21652317463417,1.10128051297009,2.34717403304412,0.436050312760893,1.75748946187577,1.36100929351998,0.699932108126813,1.43752564364972,0.167782606057736,1.45072428402269,0,0.771778308107841,0.573066879877513,1.54701627683233,0.606949382578793,0.528990979272033,0.633831403506179,1.35537812827653,0,0.899899717281399,0,0,1.49800055259202,1.92109152660777,0.311068836925433,0.135005938331691,0,2.28520787523043,1.10434270475807,0.122490799214954,0,0,2.20231761998777,0.893811366596314,3.07213066512487,0.923204014111357,0.731901148819277,1.04182674111352,1.11673199600552,2.8138130501584,2.75036845998258,1.76777151284201,1.70846016958924,0.559198337475902,0.151452386666368,0.377857800533928,0.289864488701678,0,0,0.539703191637817,0,0,0.702222100658759,1.1930122580464,0.779358013808606,1.7666978725517,0.985903938436763,2.56652954828636,0,0,0.432982082022428,0,1.01104889002957,0.68510327831436,0,0.445326417194474,1.04091196059682,0.304465478312141,0.461230994512117,0.452167921657868,0.823120949949934,1.0053327306374,0.494389935468748,1.15679485535929,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,1.8850203613211,0.255457055208591,0,0,0.381210681219194,1.3481157546434,0.915001205637253,0,1.04294592115366,0.255715457330331,1.87009240103604,0.811206315338788,0.916554274652847,0,0.505445516867349,1.26265113531884,0.650602214813519,0,0.360124259610698,0.452114453507145,0.544291993210623,1.2811372028485,0.374806898238915,0.517406741478031,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0.823128545631774,0.398068533636986,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0.493679549740441,0.656669856316381,0.891756905004413,1.02339991197733,0.878200461164203,0.671032093801859,0.210289948564127,0.205809224758569,0.330418782983798,0,0.426576501070468,0.232236671860439,0.38660238396628,0.605050573870028,0,0.380451252225118,0,0.164698954724011,0,0,0,0,0.432276099749388,0.199141273254367,0,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.561086559122548,0.569128834118316,0.442830443938806,0.31399745568275,0.616985819609003,0,0.333690211432188,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0.505157755894224,0,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0.469380496577004,0.837531287209079,0.476087281772027,0.585400943573396,0.315270288212382,0,0.318909537314974,0.491589944147214,0.518054945597687,0.289298117163023,6.03165135757089,4.35124547054968,0,0,0.80275294993896,0.703270119553219,0.163934945376675,0.252470927204373,0.631016438832513,0.780877488593277,1.07711698866399,1.67278158566786,0.891194696329576,0.849229592366497,2.42886421004937,2.33804686329049,1.18586333383957,0.642642632843614,1.41940085208269,0.712262414669021,0.488660878060728,0.494910368917606,0,0,0.302323556964751,0.943025398779491,0.295301892880773,1.84461088766356,0.258428293168221,1.09060118843252,0.712994756769443,0.316036757935816,0,0,1.36175842301515,0.720244376125241,0.776152102696527,0.428674070063185,1.06404140185364,0.713475270408282,0.493647061806363,0.608929898229199,0,0.63549621259146,0.441056796109924,0.49465875882444,0.645857706783622,0.120625849856312,0,0.164140899745061,0,0.927126510052548,0,0.82554747185289,0.185194527369712,0,0.27338845544205,0,0.169978429993855,0.559805809294632,0.138199973804424,0,0.474503990371703,0.813277868507395,0,0.418176592028937,0.218362563746178,0,0.495920734352016,0.26175594198403,0.259229946583586,0.621339313086926,3.38215763210514,0.448549638131936,0.827292452285488,0.388902376688095,0.387479470433193,2.02747350588934,0.469428954583016,0.39061315453185,0.734015410979976,0.724752362478018,2.01621004380506,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0.665957860122194,0.179427713218951,0.335769232728157,0.386379188064381,0.375364950902364,0.73260649706906,0.214368379079066,0.501572104035363,1.6942555278512,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,0,2.2516060161211,0.453142408984205,0,0.207574695168353,1.19707462020309,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,1.23621034343337,0.64183841918363,0.252697211763798,0.25347929989024,0.754505365544305,0.37456602987953,0.128050304809739,0.28717734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|short_description=p6@Urgcp
}}

Revision as of 20:03, 12 September 2013

Short description:p6@Urgcp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Urgcp_5end
Coexpression cluster:NA
Association with transcript: 317bp_to_ENSMUST00000120306_5end
EntrezGene:Urgcp
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p6@Urgcp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system8.60e-1173
nervous system2.67e-1075
ectoderm-derived structure5.59e-0895
ectoderm5.59e-0895
presumptive ectoderm5.59e-0895
regional part of nervous system1.21e-0754
regional part of midbrain7.69e-074
midbrain7.69e-074
presumptive midbrain7.69e-074
midbrain neural tube7.69e-074







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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