FFCP PHASE1:Hg19::chr2:87088995..87089018,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=926|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1707|TSSclassifier=S|UniProt=B4E0F8|association_with_transcript=0bp_to_ENST00000445248_5end|coexpression_cluster_id=C1077|description=CAGE_peak_1_at_CD8B_5end|id=chr2:87088995..87089018,-|ontology_enrichment_celltype=CL:0000625!5.36e-31!11;CL:0000791!4.71e-21!18;CL:0000789!4.71e-21!18;CL:0002420!4.71e-21!18;CL:0002419!4.71e-21!18;CL:0000790!4.71e-21!18;CL:0000084!5.46e-17!25;CL:0000827!5.46e-17!25;CL:0000838!1.15e-11!52;CL:0000542!2.31e-11!53;CL:0000051!2.31e-11!53;CL:0002087!1.30e-09!119;CL:0000842!4.88e-09!3;CL:0000623!5.29e-09!3;CL:0000825!5.29e-09!3;CL:0000738!9.37e-09!140;CL:0000224!7.39e-07!4|ontology_enrichment_celltype_v019=CL:0000625;4.56e-71;11!CL:0000791;1.11e-42;18!CL:0000789;1.11e-42;18!CL:0002419;1.11e-42;18!CL:0000084;4.19e-36;25!CL:0000226;4.32e-19;3!CL:0000842;4.32e-19;3!CL:0000542;3.50e-11;53!CL:0000623;3.52e-09;3|ontology_enrichment_celltype_v019_2=CL:0000625,4.72e-71,11;CL:0000791,1.14e-42,18;CL:0000789,1.14e-42,18;CL:0002420,1.14e-42,18;CL:0002419,1.14e-42,18;CL:0000790,1.14e-42,18;CL:0000084,4.26e-36,25;CL:0000827,4.26e-36,25;CL:0000838,4.83e-22,52;CL:0000542,1.42e-21,53;CL:0000051,1.42e-21,53;CL:0000226,4.19e-19,3;CL:0000842,4.19e-19,3;CL:0002087,9.19e-13,115;CL:0000738,1.09e-11,136;CL:0000623,3.38e-09,3;CL:0000825,3.38e-09,3;CL:0000037,8.54e-09,168;CL:0000988,3.60e-08,177;CL:0002031,6.65e-08,120|ontology_enrichment_development_v019=CL:0000790;1.11e-42;18!CL:0000051;3.50e-11;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!6.90e-25!15;UBERON:0000179!6.90e-25!15;UBERON:0000463!6.90e-25!15;UBERON:0007023!1.47e-14!115;UBERON:0002193!1.83e-08!112;UBERON:0002390!5.62e-08!102;UBERON:0003061!5.62e-08!102|ontology_enrichment_uberon_v019=UBERON:0000178;4.98e-49;15!UBERON:0000179;4.98e-49;15!UBERON:0000463;4.98e-49;15!UBERON:0002390;1.57e-28;32!UBERON:0002193;3.68e-19;42!UBERON:0002370;7.36e-15;2!UBERON:0005058;7.36e-15;2!UBERON:0009113;7.36e-15;2!UBERON:0000029;1.18e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.23e-49,15;UBERON:0000179,5.23e-49,15;UBERON:0000463,5.23e-49,15;UBERON:0002193,8.76e-09,108;UBERON:0002390,1.86e-08,98;UBERON:0003061,1.86e-08,98;UBERON:0002370,7.47e-08,4;UBERON:0005058,7.47e-08,4;UBERON:0009113,7.47e-08,4;UBERON:0003295,7.47e-08,4;UBERON:0005562,7.47e-08,4;UBERON:0000029,1.04e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.464448369948228,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,6.68987370080603,18.2303367079797,19.0090408889675,3.312652619711,6.52731716887534,3.74792179657038,9.70786733380469,11.4957919568947,10.8867641341356,10.1627274397733,11.7307767145067,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,0.862510299438069,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.07857100409308,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,0.764637207142375,2.84823593587081,3.33524485640905,3.29089818468955,3.8908398671563,3.7802200606668,2.37937552888281,0,0,0,0,0,26.5359075689585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,9.57932369387759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,2.97699613087171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1707 | |||
|TSSclassifier=S | |||
|UniProt=B4E0F8 | |||
|association_with_transcript=0bp_to_ENST00000445248_5end | |||
|coexpression_cluster_id=C1077 | |||
|description=CAGE_peak_1_at_CD8B_5end | |||
|id=chr2:87088995..87089018,- | |||
|ontology_enrichment_celltype=CL:0000625!5.36e-31!11;CL:0000791!4.71e-21!18;CL:0000789!4.71e-21!18;CL:0002420!4.71e-21!18;CL:0002419!4.71e-21!18;CL:0000790!4.71e-21!18;CL:0000084!5.46e-17!25;CL:0000827!5.46e-17!25;CL:0000838!1.15e-11!52;CL:0000542!2.31e-11!53;CL:0000051!2.31e-11!53;CL:0002087!1.30e-09!119;CL:0000842!4.88e-09!3;CL:0000623!5.29e-09!3;CL:0000825!5.29e-09!3;CL:0000738!9.37e-09!140;CL:0000224!7.39e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000625;4.56e-71;11!CL:0000791;1.11e-42;18!CL:0000789;1.11e-42;18!CL:0002419;1.11e-42;18!CL:0000084;4.19e-36;25!CL:0000226;4.32e-19;3!CL:0000842;4.32e-19;3!CL:0000542;3.50e-11;53!CL:0000623;3.52e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.72e-71,11;CL:0000791,1.14e-42,18;CL:0000789,1.14e-42,18;CL:0002420,1.14e-42,18;CL:0002419,1.14e-42,18;CL:0000790,1.14e-42,18;CL:0000084,4.26e-36,25;CL:0000827,4.26e-36,25;CL:0000838,4.83e-22,52;CL:0000542,1.42e-21,53;CL:0000051,1.42e-21,53;CL:0000226,4.19e-19,3;CL:0000842,4.19e-19,3;CL:0002087,9.19e-13,115;CL:0000738,1.09e-11,136;CL:0000623,3.38e-09,3;CL:0000825,3.38e-09,3;CL:0000037,8.54e-09,168;CL:0000988,3.60e-08,177;CL:0002031,6.65e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.11e-42;18!CL:0000051;3.50e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.90e-25!15;UBERON:0000179!6.90e-25!15;UBERON:0000463!6.90e-25!15;UBERON:0007023!1.47e-14!115;UBERON:0002193!1.83e-08!112;UBERON:0002390!5.62e-08!102;UBERON:0003061!5.62e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.98e-49;15!UBERON:0000179;4.98e-49;15!UBERON:0000463;4.98e-49;15!UBERON:0002390;1.57e-28;32!UBERON:0002193;3.68e-19;42!UBERON:0002370;7.36e-15;2!UBERON:0005058;7.36e-15;2!UBERON:0009113;7.36e-15;2!UBERON:0000029;1.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.23e-49,15;UBERON:0000179,5.23e-49,15;UBERON:0000463,5.23e-49,15;UBERON:0002193,8.76e-09,108;UBERON:0002390,1.86e-08,98;UBERON:0003061,1.86e-08,98;UBERON:0002370,7.47e-08,4;UBERON:0005058,7.47e-08,4;UBERON:0009113,7.47e-08,4;UBERON:0003295,7.47e-08,4;UBERON:0005562,7.47e-08,4;UBERON:0000029,1.04e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.464448369948228,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,6.68987370080603,18.2303367079797,19.0090408889675,3.312652619711,6.52731716887534,3.74792179657038,9.70786733380469,11.4957919568947,10.8867641341356,10.1627274397733,11.7307767145067,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,0.862510299438069,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.07857100409308,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,0.764637207142375,2.84823593587081,3.33524485640905,3.29089818468955,3.8908398671563,3.7802200606668,2.37937552888281,0,0,0,0,0,26.5359075689585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,9.57932369387759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,2.97699613087171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.747667062745149,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0.617393264863557,0,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3806443146374,34.4258889425913,28.4922938617988,0,0.0636471582781649,0,0,0,0.471464371102113,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0,0,6.64203518850387,0 | |||
|short_description=p1@CD8B | |||
}} |
Revision as of 20:07, 12 September 2013
Short description: | p1@CD8B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CD8B_5end |
Coexpression cluster: | C1077_thymus_CD8_Natural_blood_NK_Peripheral_acute |
Association with transcript: | 0bp_to_ENST00000445248_5end |
EntrezGene: | CD8B |
HGNC: | 1707 |
UniProt: | B4E0F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.72e-71 | 11 |
mature alpha-beta T cell | 1.14e-42 | 18 |
alpha-beta T cell | 1.14e-42 | 18 |
immature T cell | 1.14e-42 | 18 |
mature T cell | 1.14e-42 | 18 |
immature alpha-beta T cell | 1.14e-42 | 18 |
T cell | 4.26e-36 | 25 |
pro-T cell | 4.26e-36 | 25 |
lymphoid lineage restricted progenitor cell | 4.83e-22 | 52 |
lymphocyte | 1.42e-21 | 53 |
common lymphoid progenitor | 1.42e-21 | 53 |
single nucleate cell | 4.19e-19 | 3 |
mononuclear cell | 4.19e-19 | 3 |
nongranular leukocyte | 9.19e-13 | 115 |
leukocyte | 1.09e-11 | 136 |
natural killer cell | 3.38e-09 | 3 |
pro-NK cell | 3.38e-09 | 3 |
hematopoietic stem cell | 8.54e-09 | 168 |
hematopoietic cell | 3.60e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 6.65e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 5.23e-49 | 15 |
haemolymphatic fluid | 5.23e-49 | 15 |
organism substance | 5.23e-49 | 15 |
hemolymphoid system | 8.76e-09 | 108 |
hematopoietic system | 1.86e-08 | 98 |
blood island | 1.86e-08 | 98 |
thymus | 7.47e-08 | 4 |
hemolymphoid system gland | 7.47e-08 | 4 |
thymic region | 7.47e-08 | 4 |
pharyngeal gland | 7.47e-08 | 4 |
thymus primordium | 7.47e-08 | 4 |
lymph node | 1.04e-07 | 1 |
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