FFCP PHASE1:Mm9::chr12:114604714..114604749,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=18|UniProt=|association_with_transcript=-26bp_to_uc011yvl.1_5end|description=CAGE_peak_1_at_uc011yvl.1_5end|id=chr12:114604714..114604749,-|ontology_enrichment_celltype=CL:0000553!1.66e-09!6;CL:0000556!1.66e-09!6|ontology_enrichment_celltype_v019_2=CL:0000553,1.50e-22,6;CL:0000556,1.50e-22,6;CL:0000050,5.14e-15,9;CL:0000839,2.33e-10,13;CL:0000763,2.19e-08,16;CL:0002027,8.07e-08,3;CL:0002006,8.07e-08,3;CL:0002024,8.07e-08,3;CL:0002031,2.26e-07,25;CL:0000049,4.95e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.81e-13!48;UBERON:0002390!2.15e-09!45;UBERON:0003061!2.15e-09!45;UBERON:0002405!5.10e-09!70;UBERON:0004177!1.74e-07!29;UBERON:0002465!2.34e-07!3;UBERON:0005153!6.01e-07!17;UBERON:0000065!8.12e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.04e-19,48;UBERON:0002405,1.04e-19,48;UBERON:0002465,2.19e-16,3;UBERON:0002106,1.91e-14,6;UBERON:0004457,1.91e-14,6;UBERON:0000042,1.91e-14,6;UBERON:0004854,1.91e-14,6;UBERON:0009034,1.91e-14,6;UBERON:0002095,1.91e-14,6;UBERON:0004782,1.91e-14,6;UBERON:0003281,1.91e-14,6;UBERON:0009664,1.91e-14,6;UBERON:0002296,1.91e-14,6;UBERON:0005602,1.91e-14,6;UBERON:0001179,1.91e-14,6;UBERON:0006293,1.91e-14,6;UBERON:0002390,9.66e-13,45;UBERON:0003061,9.66e-13,45;UBERON:0001962,3.04e-11,2;UBERON:0001961,3.04e-11,2;UBERON:0001744,3.04e-11,2;UBERON:0003887,9.61e-09,10;UBERON:0002371,2.19e-08,16;UBERON:0004923,1.67e-07,24;UBERON:0000029,8.36e-07,1;UBERON:0001097,8.36e-07,1;UBERON:0003968,8.36e-07,1;UBERON:0001467,8.36e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,3.64455481301687,0,14.5112596064789,12.3402990245165,10.6097412949508,0.340173160604279,0.0992909512008853,0,3.03985603307473,1.83527424853736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.25602267690966,8.54495016035667,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0.268412837520744,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.370850604021019,6.32222258952055,0,0,3.39063222608444,2.46049609897845,3.88922894451088,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0,0.403865799792591,0.228620419965,1.00826185136841,1.36441033035653,0.673482891482306,0.701261413089414,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@uc011yvl.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt= | |||
|association_with_transcript=-26bp_to_uc011yvl.1_5end | |||
|description=CAGE_peak_1_at_uc011yvl.1_5end | |||
|id=chr12:114604714..114604749,- | |||
|ontology_enrichment_celltype=CL:0000553!1.66e-09!6;CL:0000556!1.66e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.50e-22,6;CL:0000556,1.50e-22,6;CL:0000050,5.14e-15,9;CL:0000839,2.33e-10,13;CL:0000763,2.19e-08,16;CL:0002027,8.07e-08,3;CL:0002006,8.07e-08,3;CL:0002024,8.07e-08,3;CL:0002031,2.26e-07,25;CL:0000049,4.95e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.81e-13!48;UBERON:0002390!2.15e-09!45;UBERON:0003061!2.15e-09!45;UBERON:0002405!5.10e-09!70;UBERON:0004177!1.74e-07!29;UBERON:0002465!2.34e-07!3;UBERON:0005153!6.01e-07!17;UBERON:0000065!8.12e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.04e-19,48;UBERON:0002405,1.04e-19,48;UBERON:0002465,2.19e-16,3;UBERON:0002106,1.91e-14,6;UBERON:0004457,1.91e-14,6;UBERON:0000042,1.91e-14,6;UBERON:0004854,1.91e-14,6;UBERON:0009034,1.91e-14,6;UBERON:0002095,1.91e-14,6;UBERON:0004782,1.91e-14,6;UBERON:0003281,1.91e-14,6;UBERON:0009664,1.91e-14,6;UBERON:0002296,1.91e-14,6;UBERON:0005602,1.91e-14,6;UBERON:0001179,1.91e-14,6;UBERON:0006293,1.91e-14,6;UBERON:0002390,9.66e-13,45;UBERON:0003061,9.66e-13,45;UBERON:0001962,3.04e-11,2;UBERON:0001961,3.04e-11,2;UBERON:0001744,3.04e-11,2;UBERON:0003887,9.61e-09,10;UBERON:0002371,2.19e-08,16;UBERON:0004923,1.67e-07,24;UBERON:0000029,8.36e-07,1;UBERON:0001097,8.36e-07,1;UBERON:0003968,8.36e-07,1;UBERON:0001467,8.36e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,3.64455481301687,0,14.5112596064789,12.3402990245165,10.6097412949508,0.340173160604279,0.0992909512008853,0,3.03985603307473,1.83527424853736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.25602267690966,8.54495016035667,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0.268412837520744,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.370850604021019,6.32222258952055,0,0,3.39063222608444,2.46049609897845,3.88922894451088,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0,0.403865799792591,0.228620419965,1.00826185136841,1.36441033035653,0.673482891482306,0.701261413089414,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@uc011yvl.1 | |||
}} |
Revision as of 22:25, 12 September 2013
Short description: | p1@uc011yvl.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc011yvl.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -26bp_to_uc011yvl.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.50e-22 | 6 |
megakaryocyte | 1.50e-22 | 6 |
megakaryocyte-erythroid progenitor cell | 5.14e-15 | 9 |
myeloid lineage restricted progenitor cell | 2.33e-10 | 13 |
myeloid cell | 2.19e-08 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 8.07e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.07e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.07e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 25 |
common myeloid progenitor | 4.95e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.04e-19 | 48 |
immune system | 1.04e-19 | 48 |
lymphoid system | 2.19e-16 | 3 |
spleen | 1.91e-14 | 6 |
cavity lining | 1.91e-14 | 6 |
serous membrane | 1.91e-14 | 6 |
gastrointestinal system mesentery | 1.91e-14 | 6 |
stomach region | 1.91e-14 | 6 |
mesentery | 1.91e-14 | 6 |
gastrointestinal system serosa | 1.91e-14 | 6 |
mesentery of stomach | 1.91e-14 | 6 |
gut mesentery | 1.91e-14 | 6 |
dorsal mesentery | 1.91e-14 | 6 |
dorsal mesogastrium | 1.91e-14 | 6 |
peritoneal cavity | 1.91e-14 | 6 |
spleen primordium | 1.91e-14 | 6 |
hematopoietic system | 9.66e-13 | 45 |
blood island | 9.66e-13 | 45 |
gut-associated lymphoid tissue | 3.04e-11 | 2 |
mucosa-associated lymphoid tissue | 3.04e-11 | 2 |
lymphoid tissue | 3.04e-11 | 2 |
intraembryonic coelom | 9.61e-09 | 10 |
bone marrow | 2.19e-08 | 16 |
organ component layer | 1.67e-07 | 24 |
lymph node | 8.36e-07 | 1 |
axillary lymph node | 8.36e-07 | 1 |
peripheral lymph node | 8.36e-07 | 1 |
shoulder | 8.36e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.