FFCP PHASE1:Hg19::chr3:167452314..167452344,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11235|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8761|TSSclassifier=S|UniProt=Q9BUL8|association_with_transcript=0bp_to_ENST00000461494_5end|coexpression_cluster_id=C17|description=CAGE_peak_4_at_PDCD10_5end|id=chr3:167452314..167452344,-|ontology_enrichment_celltype=CL:0000839!1.29e-09!70;CL:0000003!4.22e-09!722;CL:0000557!5.06e-09!71;CL:0002009!1.10e-08!65;CL:0000548!1.64e-08!679;CL:0000004!1.64e-08!679;CL:0000255!1.64e-08!679;CL:0000012!2.92e-08!682;CL:0002194!4.23e-08!63;CL:0000576!4.23e-08!63;CL:0000040!4.23e-08!63;CL:0000559!4.23e-08!63;CL:0000763!6.12e-08!112;CL:0000049!6.12e-08!112;CL:0000860!1.56e-07!45;CL:0002057!2.19e-07!42;CL:0000766!8.87e-07!76|ontology_enrichment_celltype_v019=CL:0000860;9.92e-14;33!CL:0002057;9.92e-14;33!CL:0000473;4.90e-11;39!CL:0000234;4.90e-11;39|ontology_enrichment_celltype_v019_2=CL:0000839,1.26e-12,66;CL:0000557,2.56e-11,67;CL:0002009,1.05e-10,61;CL:0000473,2.40e-10,48;CL:0000234,2.40e-10,48;CL:0002194,2.92e-10,59;CL:0000576,2.92e-10,59;CL:0000040,2.92e-10,59;CL:0000559,2.92e-10,59;CL:0000766,3.42e-10,72;CL:0000860,5.35e-10,42;CL:0002057,5.35e-10,42;CL:0000763,1.30e-09,108;CL:0000049,1.30e-09,108;CL:0002031,1.68e-08,120;CL:0002032,3.28e-07,161;CL:0000837,3.28e-07,161|ontology_enrichment_development_v019=CL:0002057;2.58e-08;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.20e-12!102;UBERON:0003061!7.20e-12!102;UBERON:0002193!7.91e-11!112;UBERON:0002371!4.56e-08!80;UBERON:0004765!4.08e-07!101;UBERON:0001434!4.08e-07!101;UBERON:0002204!5.97e-07!167|ontology_enrichment_uberon_v019=UBERON:0000178;1.13e-10;15!UBERON:0000179;1.13e-10;15!UBERON:0000463;1.13e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.07e-17,98;UBERON:0003061,4.07e-17,98;UBERON:0002193,2.50e-15,108;UBERON:0000178,9.22e-11,15;UBERON:0000179,9.22e-11,15;UBERON:0000463,9.22e-11,15;UBERON:0002371,9.23e-11,76;UBERON:0001474,2.03e-09,82;UBERON:0002405,6.79e-09,93;UBERON:0004765,1.02e-08,90;UBERON:0003081,5.74e-08,203;UBERON:0001434,4.13e-07,100;UBERON:0000926,6.12e-07,315;UBERON:0004120,6.12e-07,315;UBERON:0006603,6.12e-07,315|phase1_expression=0.363356758541113,0,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.491467873003018,0,0,0.263766978228454,0.866364470720326,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0.136874425072884,0.376627918784408,0.840547463227464,0.492603536699674,0.629686250509434,0,0,0.309632246632152,0.919421224478927,0.30120591877825,0.369754010166788,0.0774672005803016,0.284338464974843,0.293600439334847,0,0.401088894940283,0,0.223915474239924,0.971680998056939,0.77272670290256,0.436194716338694,1.13362783106643,0.485168122375632,1.39457422143411,2.05583944010913,1.54853185447552,2.01384674625505,2.30544635876191,2.12834006899727,0.344745680736619,0.645484683583826,1.35426486594342,1.31769637679823,2.45615535052061,0.898893937780338,1.53041946185451,0.962787081228281,1.27867425159808,0.989553900560148,1.19678194572979,0.426224750532694,1.7412554317715,2.26954089876456,2.4912889959823,1.50749199154046,0.521482918420201,2.38907729175628,0.605399502633369,1.47311054395026,0.949387162322653,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,1.09227722252426,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0.334372990781356,0.32592226663359,0,0,0.668462741311041,0.294605907474837,0.664601683750863,0.541607727530031,0.512365278902701,0.390178042679635,0.657751618414705,0,0,0.14828656316206,0,0,0.339928028092699,0,0,0,0,0,0,0.451725357233318,0.255973222308837,0,0.236777252044017,1.64225599384209,0.201606743224732,0,0.289648807765598,0,0,0.639312809217652,0.722878304769133,1.00267582127178,0.724232594804119,0.795285947051099,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.916853528483988,0,0.370784442784429,2.27183175558278,2.78607579678828,1.59549552622638,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0.550236083880135,0,0.516833518338658,0,1.00416183829401,0.805658634218294,0,0.732186172644509,1.47065232138347,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,1.01304409331664,0.397227542439656,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,0.98667019366864,0.311211035399766,1.34710672069688,0.163461903113459,0,0,0.468642863667593,1.24864030732128,0,0.448346041655403,0.23486899728753,0.485618833104395,0.280901613404497,1.22492502752936,0.245668634623536,0.929932030581889,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0.554128230968366,0,0.612975591598039,0.751190294532984,0.453728732640084,0,0.213557388818567,0.211931901159562,1.20036438433761,1.03052529238439,0.515281080091258,0.186116856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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11235 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8761 | |||
|TSSclassifier=S | |||
|UniProt=Q9BUL8 | |||
|association_with_transcript=0bp_to_ENST00000461494_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_4_at_PDCD10_5end | |||
|id=chr3:167452314..167452344,- | |||
|ontology_enrichment_celltype=CL:0000839!1.29e-09!70;CL:0000003!4.22e-09!722;CL:0000557!5.06e-09!71;CL:0002009!1.10e-08!65;CL:0000548!1.64e-08!679;CL:0000004!1.64e-08!679;CL:0000255!1.64e-08!679;CL:0000012!2.92e-08!682;CL:0002194!4.23e-08!63;CL:0000576!4.23e-08!63;CL:0000040!4.23e-08!63;CL:0000559!4.23e-08!63;CL:0000763!6.12e-08!112;CL:0000049!6.12e-08!112;CL:0000860!1.56e-07!45;CL:0002057!2.19e-07!42;CL:0000766!8.87e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.92e-14;33!CL:0002057;9.92e-14;33!CL:0000473;4.90e-11;39!CL:0000234;4.90e-11;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.26e-12,66;CL:0000557,2.56e-11,67;CL:0002009,1.05e-10,61;CL:0000473,2.40e-10,48;CL:0000234,2.40e-10,48;CL:0002194,2.92e-10,59;CL:0000576,2.92e-10,59;CL:0000040,2.92e-10,59;CL:0000559,2.92e-10,59;CL:0000766,3.42e-10,72;CL:0000860,5.35e-10,42;CL:0002057,5.35e-10,42;CL:0000763,1.30e-09,108;CL:0000049,1.30e-09,108;CL:0002031,1.68e-08,120;CL:0002032,3.28e-07,161;CL:0000837,3.28e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.58e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.20e-12!102;UBERON:0003061!7.20e-12!102;UBERON:0002193!7.91e-11!112;UBERON:0002371!4.56e-08!80;UBERON:0004765!4.08e-07!101;UBERON:0001434!4.08e-07!101;UBERON:0002204!5.97e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.13e-10;15!UBERON:0000179;1.13e-10;15!UBERON:0000463;1.13e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.07e-17,98;UBERON:0003061,4.07e-17,98;UBERON:0002193,2.50e-15,108;UBERON:0000178,9.22e-11,15;UBERON:0000179,9.22e-11,15;UBERON:0000463,9.22e-11,15;UBERON:0002371,9.23e-11,76;UBERON:0001474,2.03e-09,82;UBERON:0002405,6.79e-09,93;UBERON:0004765,1.02e-08,90;UBERON:0003081,5.74e-08,203;UBERON:0001434,4.13e-07,100;UBERON:0000926,6.12e-07,315;UBERON:0004120,6.12e-07,315;UBERON:0006603,6.12e-07,315 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.491467873003018,0,0,0.263766978228454,0.866364470720326,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0.136874425072884,0.376627918784408,0.840547463227464,0.492603536699674,0.629686250509434,0,0,0.309632246632152,0.919421224478927,0.30120591877825,0.369754010166788,0.0774672005803016,0.284338464974843,0.293600439334847,0,0.401088894940283,0,0.223915474239924,0.971680998056939,0.77272670290256,0.436194716338694,1.13362783106643,0.485168122375632,1.39457422143411,2.05583944010913,1.54853185447552,2.01384674625505,2.30544635876191,2.12834006899727,0.344745680736619,0.645484683583826,1.35426486594342,1.31769637679823,2.45615535052061,0.898893937780338,1.53041946185451,0.962787081228281,1.27867425159808,0.989553900560148,1.19678194572979,0.426224750532694,1.7412554317715,2.26954089876456,2.4912889959823,1.50749199154046,0.521482918420201,2.38907729175628,0.605399502633369,1.47311054395026,0.949387162322653,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,1.09227722252426,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0.334372990781356,0.32592226663359,0,0,0.668462741311041,0.294605907474837,0.664601683750863,0.541607727530031,0.512365278902701,0.390178042679635,0.657751618414705,0,0,0.14828656316206,0,0,0.339928028092699,0,0,0,0,0,0,0.451725357233318,0.255973222308837,0,0.236777252044017,1.64225599384209,0.201606743224732,0,0.289648807765598,0,0,0.639312809217652,0.722878304769133,1.00267582127178,0.724232594804119,0.795285947051099,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.916853528483988,0,0.370784442784429,2.27183175558278,2.78607579678828,1.59549552622638,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0.550236083880135,0,0.516833518338658,0,1.00416183829401,0.805658634218294,0,0.732186172644509,1.47065232138347,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,1.01304409331664,0.397227542439656,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,0.98667019366864,0.311211035399766,1.34710672069688,0.163461903113459,0,0,0.468642863667593,1.24864030732128,0,0.448346041655403,0.23486899728753,0.485618833104395,0.280901613404497,1.22492502752936,0.245668634623536,0.929932030581889,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0.554128230968366,0,0.612975591598039,0.751190294532984,0.453728732640084,0,0.213557388818567,0.211931901159562,1.20036438433761,1.03052529238439,0.515281080091258,0.18611685633159,0.675105328965065,1.85130309806277,0.252433774244115,0.460249493211497,0.323292113637624,0,0.503760491138201,0.67824236924195,0.57978255948989,1.09098448236334,0.573609190778008,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0.857839051492628,0.329250856225877,1.1240175325762,0.904760751704678,1.20364978706088,0.325808305310325,0,0,0.115930404975077,0.352226082707465,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0.984868024349589,2.34004265139238,0.891786973732369,0.93733833986777,1.51183915378974,0.992425680696705,1.16426079513703,1.16253575405585,0.383382679165211,41.8763752211552,1.67292024625129,0.621984346622316,0.144119953416961,0.37872730027914,0.380987365753014,0.381988425558278,0,1.71072446022705,0,1.20137223137567,0.285826432630578,0,0.43596006883328,0.07333828582095,0.517086863031111,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,2.61460037580088,0.899756920638513,1.2162378064119,0,0,0.479249710983165,0,0,0.868687840005475,1.02738161275192,1.96967059563885,0.560425719967636,0.394061520403854,0.646882724578552,0,0,0,0,0.167516265334349,0.637938751653163,0,2.99161459204025,0,0.858840442033979,0,0.271265023699736,0.415941723061614,0.356857977594324,0.630809660135739,0.234282829985426,0,0,0,0,0,0.521301686808497,0,0.343143423810856,0.620304078368662,0.215714200818617,0.213455115606889,0,0,0,0.496215615637554,0.61384789315225,1.12264037773229,0.256278298511402,2.04682899626681,0.64341568457443,1.48418066444991,0.154209693802656,0.710246901252508,0.328508624055237,0.519254429183621,0.581051892299796,0.241718899183244,1.40354529212299,0.460404944679482,0.574072240823034,0,0.524497659837696,0,0.0770153371044148,0,1.46139224653261,0.211103257785751,0,0.340187410553031,0.431831832204279,0,0,0,0.254876273045038,0.831076008928724,0.447749509444357,1.31555925987561,1.3071772551245,0,0,0.325378394664303,0.206082023295445,0.27470839445503,0.330037999682352,0.574265537996172,0.650060246036521,0,0.193341436584244,0.616194468458578,0.7675183736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| |||
|short_description=p4@PDCD10 | |||
}} |
Revision as of 22:35, 12 September 2013
Short description: | p4@PDCD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PDCD10_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000461494_5end |
EntrezGene: | PDCD10 |
HGNC: | 8761 |
UniProt: | Q9BUL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.26e-12 | 66 |
granulocyte monocyte progenitor cell | 2.56e-11 | 67 |
macrophage dendritic cell progenitor | 1.05e-10 | 61 |
defensive cell | 2.40e-10 | 48 |
phagocyte | 2.40e-10 | 48 |
monopoietic cell | 2.92e-10 | 59 |
monocyte | 2.92e-10 | 59 |
monoblast | 2.92e-10 | 59 |
promonocyte | 2.92e-10 | 59 |
myeloid leukocyte | 3.42e-10 | 72 |
classical monocyte | 5.35e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.35e-10 | 42 |
myeloid cell | 1.30e-09 | 108 |
common myeloid progenitor | 1.30e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 1.68e-08 | 120 |
hematopoietic oligopotent progenitor cell | 3.28e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.28e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.07e-17 | 98 |
blood island | 4.07e-17 | 98 |
hemolymphoid system | 2.50e-15 | 108 |
blood | 9.22e-11 | 15 |
haemolymphatic fluid | 9.22e-11 | 15 |
organism substance | 9.22e-11 | 15 |
bone marrow | 9.23e-11 | 76 |
bone element | 2.03e-09 | 82 |
immune system | 6.79e-09 | 93 |
skeletal element | 1.02e-08 | 90 |
lateral plate mesoderm | 5.74e-08 | 203 |
skeletal system | 4.13e-07 | 100 |
mesoderm | 6.12e-07 | 315 |
mesoderm-derived structure | 6.12e-07 | 315 |
presumptive mesoderm | 6.12e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.