FFCP PHASE1:Mm9::chr12:52941704..52941726,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2036|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:52941704..52941726,-|id=chr12:52941704..52941726,-|ontology_enrichment_celltype=CL:0000055!1.99e-24!50;CL:0002319!9.46e-22!43;CL:0000221!1.11e-20!44;CL:0000133!1.11e-20!44;CL:0002321!1.06e-19!70;CL:0000220!1.06e-19!70;CL:0000393!2.96e-19!39;CL:0000211!2.96e-19!39;CL:0000548!2.15e-17!115;CL:0000004!2.15e-17!115;CL:0000255!2.15e-17!115;CL:0002371!6.11e-16!118;CL:0000540!1.08e-15!33;CL:0000047!1.08e-15!33;CL:0000031!1.08e-15!33;CL:0000404!1.08e-15!33;CL:0000144!1.39e-14!121;CL:0000012!1.39e-14!121;CL:0000117!5.99e-13!23;CL:0000337!5.99e-13!23;CL:0000723!1.04e-12!91;CL:0000048!1.04e-12!91;CL:0000034!3.07e-11!97;CL:0000333!5.39e-07!10;CL:0000095!5.39e-07!10;CL:0000243!5.39e-07!10;CL:0000123!5.39e-07!10;CL:0000125!5.39e-07!10;CL:0000030!5.39e-07!10;CL:0000339!5.39e-07!10|ontology_enrichment_celltype_v019_2=CL:0002321,3.15e-39,70;CL:0002319,5.84e-39,43;CL:0000221,9.06e-38,44;CL:0000133,9.06e-38,44;CL:0000393,2.10e-34,39;CL:0000211,2.10e-34,39;CL:0000540,6.66e-28,33;CL:0000047,6.66e-28,33;CL:0000031,6.66e-28,33;CL:0000404,6.66e-28,33;CL:0000723,8.71e-27,91;CL:0000048,8.71e-27,91;CL:0000034,3.08e-25,97;CL:0000117,3.69e-22,23;CL:0000337,3.69e-22,23;CL:0000333,2.13e-11,10;CL:0000095,2.13e-11,10;CL:0000243,2.13e-11,10;CL:0000123,2.13e-11,10;CL:0000125,2.13e-11,10;CL:0000030,2.13e-11,10;CL:0000339,2.13e-11,10;CL:0002453,2.69e-10,8;CL:0000128,3.04e-08,6;CL:0000126,3.04e-08,6;CL:0000127,3.04e-08,6;CL:0000219,5.45e-08,54;CL:0000107,6.72e-08,9;CL:0000680,2.15e-07,6;CL:0000187,2.15e-07,6;CL:0000056,2.15e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.22e-11!75;UBERON:0001016!1.22e-11!75;UBERON:0001017!6.04e-11!73;UBERON:0005743!6.04e-11!73|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.04e-17,75;UBERON:0001017,1.21e-15,73;UBERON:0004121,9.09e-11,95;UBERON:0000924,9.09e-11,95;UBERON:0006601,9.09e-11,95;UBERON:0000010,4.13e-09,11;UBERON:0002020,4.74e-08,34;UBERON:0002410,6.72e-08,9;UBERON:0000073,6.56e-07,54|phase1_expression=0,0,0.454999239389536,5.44435580352294,3.50627010962443,0,3.97141489012394,2.1950964985068,0.140788722151667,1.87251621057595,0,2.6324812468461,0,0.874204024189974,0,0.202475267389826,0,0,0,0,3.31668831589172,0.297872853602656,0.522399578277871,6.87967418011649,7.57050627521661,0.57423196411502,0,0.215471232685889,10.8313349090133,0.504060259519861,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,10.9530231638752,8.92116994731728,7.52541683862894,16.4302182313088,8.06693078607652,4.17403747195497,9.3326351555656,8.53917171914711,7.18762821824858,0,0,0.336093799142464,2.31533492432352,4.01146815914259,6.18806510732931,4.24864567805155,1.5869729378161,4.43681982454325,6.43804610931351,13.3394219416671,5.84934816232909,10.8775299882367,10.6572017241915,7.78960287347852,6.14749288514487,1.45165457231869,2.97013064329719,3.36519938162211,8.2838785477103,8.83474163806454,5.38959516545798,5.07980996396653,8.27296907949019,7.70811166995721,5.61824287574826,6.60508093001847,4.3522474950964,4.11694396210843,3.12548022334056,10.6089539620525,11.8180148106653,6.41752640662602,5.30331453852602,3.41692033917847,2.79599168737951,2.72614295999463,2.11600368298999,0,0,12.9194553404473,8.09554787456726,0,0.448026887097336,10.2524426696179,5.62420064507591,8.57293815189467,6.36011234118612,0,2.56652954828636,0,0,0.216491041011214,0,1.01104889002957,6.8510327831436,0,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0.289198713839823,1.76922110389975,0,0,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0,0.521472960576829,0,0.20778804455956,0.162241263067758,0,0,0.252722758433675,0,0.260240885925407,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0,0,0.154267112887378,0.697601834251224,1.07309360559848,0,0.329119699826961,0.820837320395476,0.162137619091711,0.877199924551994,0.658650345873152,0.536825675041487,0.630869845692382,0.102904612379284,0.330418782983798,8.46241813323342,0.213288250535234,0,0.38660238396628,0.201683524623343,0.667134131534611,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0,0,0.432276099749388,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.493588655687202,0,0.166845105716094,0,0.224862112384854,0,0,0.50925170356284,0.575392274901621,0.162135226775035,0,0,0,0,0.505157755894224,0,0.482443521363367,0,0.189491411770485,0,0.339490171550376,0.234690248288502,1.00503754465089,0,0,0,0,0,0,0,0.289298117163023,1.50791283939272,4.89515115436839,0,0,0,0.468846746368813,2.13115428989678,0.252470927204373,3.15508219416257,4.68526493155966,3.44677436372478,2.15071918157297,2.00518806674155,3.11384183867716,4.45291771842384,2.92255857911312,3.95287777946523,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0.590603785761546,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0,0,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0,0.26175594198403,0.259229946583586,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0.15241361331,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,2.44184548711471,0,0.167884616364078,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0.415149390336707,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0.50695859978048,0,0.561849044819294,0,0.0574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0.824171801606613,0,1.37147700954166,0.177475806159338,0.238436189947321,0.290692833264657,0,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p@chr12:52941704..52941726,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2036 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:52941704..52941726,- | |||
|id=chr12:52941704..52941726,- | |||
|ontology_enrichment_celltype=CL:0000055!1.99e-24!50;CL:0002319!9.46e-22!43;CL:0000221!1.11e-20!44;CL:0000133!1.11e-20!44;CL:0002321!1.06e-19!70;CL:0000220!1.06e-19!70;CL:0000393!2.96e-19!39;CL:0000211!2.96e-19!39;CL:0000548!2.15e-17!115;CL:0000004!2.15e-17!115;CL:0000255!2.15e-17!115;CL:0002371!6.11e-16!118;CL:0000540!1.08e-15!33;CL:0000047!1.08e-15!33;CL:0000031!1.08e-15!33;CL:0000404!1.08e-15!33;CL:0000144!1.39e-14!121;CL:0000012!1.39e-14!121;CL:0000117!5.99e-13!23;CL:0000337!5.99e-13!23;CL:0000723!1.04e-12!91;CL:0000048!1.04e-12!91;CL:0000034!3.07e-11!97;CL:0000333!5.39e-07!10;CL:0000095!5.39e-07!10;CL:0000243!5.39e-07!10;CL:0000123!5.39e-07!10;CL:0000125!5.39e-07!10;CL:0000030!5.39e-07!10;CL:0000339!5.39e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.15e-39,70;CL:0002319,5.84e-39,43;CL:0000221,9.06e-38,44;CL:0000133,9.06e-38,44;CL:0000393,2.10e-34,39;CL:0000211,2.10e-34,39;CL:0000540,6.66e-28,33;CL:0000047,6.66e-28,33;CL:0000031,6.66e-28,33;CL:0000404,6.66e-28,33;CL:0000723,8.71e-27,91;CL:0000048,8.71e-27,91;CL:0000034,3.08e-25,97;CL:0000117,3.69e-22,23;CL:0000337,3.69e-22,23;CL:0000333,2.13e-11,10;CL:0000095,2.13e-11,10;CL:0000243,2.13e-11,10;CL:0000123,2.13e-11,10;CL:0000125,2.13e-11,10;CL:0000030,2.13e-11,10;CL:0000339,2.13e-11,10;CL:0002453,2.69e-10,8;CL:0000128,3.04e-08,6;CL:0000126,3.04e-08,6;CL:0000127,3.04e-08,6;CL:0000219,5.45e-08,54;CL:0000107,6.72e-08,9;CL:0000680,2.15e-07,6;CL:0000187,2.15e-07,6;CL:0000056,2.15e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.22e-11!75;UBERON:0001016!1.22e-11!75;UBERON:0001017!6.04e-11!73;UBERON:0005743!6.04e-11!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.04e-17,75;UBERON:0001017,1.21e-15,73;UBERON:0004121,9.09e-11,95;UBERON:0000924,9.09e-11,95;UBERON:0006601,9.09e-11,95;UBERON:0000010,4.13e-09,11;UBERON:0002020,4.74e-08,34;UBERON:0002410,6.72e-08,9;UBERON:0000073,6.56e-07,54 | |||
|phase1_expression=0,0,0.454999239389536,5.44435580352294,3.50627010962443,0,3.97141489012394,2.1950964985068,0.140788722151667,1.87251621057595,0,2.6324812468461,0,0.874204024189974,0,0.202475267389826,0,0,0,0,3.31668831589172,0.297872853602656,0.522399578277871,6.87967418011649,7.57050627521661,0.57423196411502,0,0.215471232685889,10.8313349090133,0.504060259519861,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,10.9530231638752,8.92116994731728,7.52541683862894,16.4302182313088,8.06693078607652,4.17403747195497,9.3326351555656,8.53917171914711,7.18762821824858,0,0,0.336093799142464,2.31533492432352,4.01146815914259,6.18806510732931,4.24864567805155,1.5869729378161,4.43681982454325,6.43804610931351,13.3394219416671,5.84934816232909,10.8775299882367,10.6572017241915,7.78960287347852,6.14749288514487,1.45165457231869,2.97013064329719,3.36519938162211,8.2838785477103,8.83474163806454,5.38959516545798,5.07980996396653,8.27296907949019,7.70811166995721,5.61824287574826,6.60508093001847,4.3522474950964,4.11694396210843,3.12548022334056,10.6089539620525,11.8180148106653,6.41752640662602,5.30331453852602,3.41692033917847,2.79599168737951,2.72614295999463,2.11600368298999,0,0,12.9194553404473,8.09554787456726,0,0.448026887097336,10.2524426696179,5.62420064507591,8.57293815189467,6.36011234118612,0,2.56652954828636,0,0,0.216491041011214,0,1.01104889002957,6.8510327831436,0,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0.289198713839823,1.76922110389975,0,0,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0,0.521472960576829,0,0.20778804455956,0.162241263067758,0,0,0.252722758433675,0,0.260240885925407,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0,0,0.154267112887378,0.697601834251224,1.07309360559848,0,0.329119699826961,0.820837320395476,0.162137619091711,0.877199924551994,0.658650345873152,0.536825675041487,0.630869845692382,0.102904612379284,0.330418782983798,8.46241813323342,0.213288250535234,0,0.38660238396628,0.201683524623343,0.667134131534611,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0,0,0.432276099749388,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.493588655687202,0,0.166845105716094,0,0.224862112384854,0,0,0.50925170356284,0.575392274901621,0.162135226775035,0,0,0,0,0.505157755894224,0,0.482443521363367,0,0.189491411770485,0,0.339490171550376,0.234690248288502,1.00503754465089,0,0,0,0,0,0,0,0.289298117163023,1.50791283939272,4.89515115436839,0,0,0,0.468846746368813,2.13115428989678,0.252470927204373,3.15508219416257,4.68526493155966,3.44677436372478,2.15071918157297,2.00518806674155,3.11384183867716,4.45291771842384,2.92255857911312,3.95287777946523,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0.590603785761546,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,0,0,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0,0.26175594198403,0.259229946583586,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0.15241361331,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,2.44184548711471,0,0.167884616364078,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0.415149390336707,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0.50695859978048,0,0.561849044819294,0,0.0574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0.824171801606613,0,1.37147700954166,0.177475806159338,0.238436189947321,0.290692833264657,0,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p@chr12:52941704..52941726,- | |||
}} |
Revision as of 22:55, 12 September 2013
Short description: | p@chr12:52941704..52941726, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:52941704..52941726, - |
Coexpression cluster: | MCL_coexpression_mm9:2036 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.15e-39 | 70 |
neural cell | 5.84e-39 | 43 |
ectodermal cell | 9.06e-38 | 44 |
neurectodermal cell | 9.06e-38 | 44 |
electrically responsive cell | 2.10e-34 | 39 |
electrically active cell | 2.10e-34 | 39 |
neuron | 6.66e-28 | 33 |
neuronal stem cell | 6.66e-28 | 33 |
neuroblast | 6.66e-28 | 33 |
electrically signaling cell | 6.66e-28 | 33 |
somatic stem cell | 8.71e-27 | 91 |
multi fate stem cell | 8.71e-27 | 91 |
stem cell | 3.08e-25 | 97 |
CNS neuron (sensu Vertebrata) | 3.69e-22 | 23 |
neuroblast (sensu Vertebrata) | 3.69e-22 | 23 |
migratory neural crest cell | 2.13e-11 | 10 |
neuron associated cell | 2.13e-11 | 10 |
glial cell (sensu Vertebrata) | 2.13e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 2.13e-11 | 10 |
glial cell | 2.13e-11 | 10 |
glioblast | 2.13e-11 | 10 |
glioblast (sensu Vertebrata) | 2.13e-11 | 10 |
oligodendrocyte precursor cell | 2.69e-10 | 8 |
oligodendrocyte | 3.04e-08 | 6 |
macroglial cell | 3.04e-08 | 6 |
astrocyte | 3.04e-08 | 6 |
motile cell | 5.45e-08 | 54 |
autonomic neuron | 6.72e-08 | 9 |
muscle precursor cell | 2.15e-07 | 6 |
muscle cell | 2.15e-07 | 6 |
myoblast | 2.15e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.04e-17 | 75 |
central nervous system | 1.21e-15 | 73 |
ectoderm-derived structure | 9.09e-11 | 95 |
ectoderm | 9.09e-11 | 95 |
presumptive ectoderm | 9.09e-11 | 95 |
peripheral nervous system | 4.13e-09 | 11 |
gray matter | 4.74e-08 | 34 |
autonomic nervous system | 6.72e-08 | 9 |
regional part of nervous system | 6.56e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.