FFCP PHASE1:Hg19::chr3:24547235..24547267,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:24547235..24547267,-|id=chr3:24547235..24547267,-|ontology_enrichment_celltype=CL:0002551!4.50e-12!6;CL:0000188!1.58e-10!9;CL:0002570!1.02e-08!8;CL:0000594!1.62e-07!3|ontology_enrichment_celltype_v019=CL:0000594;5.10e-20;3!CL:0000188;1.73e-17;9!CL:0002561;4.54e-14;2!CL:0002551;7.90e-10;6!CL:0000680;7.17e-09;7!CL:0002570;1.06e-07;8!CL:0002574;1.26e-07;1|ontology_enrichment_celltype_v019_2=CL:0000594,4.94e-20,3;CL:0000188,1.95e-17,9;CL:0002561,4.54e-14,2;CL:0002551,6.89e-10,6;CL:0002570,1.01e-07,8;CL:0002574,1.22e-07,1|ontology_enrichment_development_v019=UBERON:0000358;8.28e-08;1|ontology_enrichment_disease=DOID:1036!7.20e-09!8|ontology_enrichment_disease_v019=DOID:1036;1.31e-07;8|ontology_enrichment_disease_v019_2=DOID:1036,1.53e-07,8|ontology_enrichment_uberon=UBERON:0001013!5.53e-08!14;UBERON:0002067!9.91e-08!9;UBERON:0004016!9.91e-08!9;UBERON:0010083!9.91e-08!9;UBERON:0001155!2.89e-07!9|ontology_enrichment_uberon_v019=UBERON:0005933;4.54e-14;2!UBERON:0005942;4.54e-14;2!UBERON:0005932;4.54e-14;2!UBERON:0001134;9.46e-10;16!UBERON:0002036;9.46e-10;16!UBERON:0005409;1.84e-09;22!UBERON:0000160;1.25e-08;17!UBERON:0002385;7.66e-07;31!UBERON:0001015;7.66e-07;31!UBERON:0000383;7.66e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0005933,4.54e-14,2;UBERON:0005942,4.54e-14,2;UBERON:0005932,4.54e-14,2;UBERON:0000160,1.40e-08,17;UBERON:0005409,2.90e-08,25;UBERON:0002329,4.70e-07,71;UBERON:0003059,4.70e-07,71;UBERON:0007282,4.70e-07,71;UBERON:0004290,4.70e-07,71;UBERON:0009618,4.70e-07,71;UBERON:0003077,6.21e-07,72;UBERON:0007285,6.21e-07,72;UBERON:0007524,8.14e-07,73;UBERON:0002067,9.65e-07,9;UBERON:0004016,9.65e-07,9;UBERON:0010083,9.65e-07,9|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0.236482229888585,1.03423704220986,0,0,0,0,0,0.306083892370903,0.641858054152187,1.91801137739712,0,0.199463657621632,0.852449501065388,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,1.5608003841516,0.570471821544449,1.49448680551801,3.52303495931295,0.323745888736263,0.561803226808994,0.816616685019573,0,3.51307655997603,0,0,0,0,0.168336113954066,0.625592599359821,1.10825646193673,0,0,0,0,0,0.213557388818567,0.635795703478686,0,0.618315175430633,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96551892047969,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2080403990784,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,10.7296933755565,3.381211010224,0,0,0,0,0,0.285955987316295,0.542621605391443,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25897397617015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.328508624055237,0,0,10.877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.462145851343933,2.14905144616581,1.10269257987624,44.9016623549384,9.57110179833908,1.36362603865761,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,1.07923474549989,0.274537029736055,0.706874414074119,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,1.35357396370308,0.588187602953219,1.00692952185506,0.75901493089674,0.317873157960757,0,0,0.989471500037586,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,25.4486814322951,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:24547235..24547267,- | |||
|id=chr3:24547235..24547267,- | |||
|ontology_enrichment_celltype=CL:0002551!4.50e-12!6;CL:0000188!1.58e-10!9;CL:0002570!1.02e-08!8;CL:0000594!1.62e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000594;5.10e-20;3!CL:0000188;1.73e-17;9!CL:0002561;4.54e-14;2!CL:0002551;7.90e-10;6!CL:0000680;7.17e-09;7!CL:0002570;1.06e-07;8!CL:0002574;1.26e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000594,4.94e-20,3;CL:0000188,1.95e-17,9;CL:0002561,4.54e-14,2;CL:0002551,6.89e-10,6;CL:0002570,1.01e-07,8;CL:0002574,1.22e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.28e-08;1 | |||
|ontology_enrichment_disease=DOID:1036!7.20e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.31e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.53e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0001013!5.53e-08!14;UBERON:0002067!9.91e-08!9;UBERON:0004016!9.91e-08!9;UBERON:0010083!9.91e-08!9;UBERON:0001155!2.89e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;4.54e-14;2!UBERON:0005942;4.54e-14;2!UBERON:0005932;4.54e-14;2!UBERON:0001134;9.46e-10;16!UBERON:0002036;9.46e-10;16!UBERON:0005409;1.84e-09;22!UBERON:0000160;1.25e-08;17!UBERON:0002385;7.66e-07;31!UBERON:0001015;7.66e-07;31!UBERON:0000383;7.66e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,4.54e-14,2;UBERON:0005942,4.54e-14,2;UBERON:0005932,4.54e-14,2;UBERON:0000160,1.40e-08,17;UBERON:0005409,2.90e-08,25;UBERON:0002329,4.70e-07,71;UBERON:0003059,4.70e-07,71;UBERON:0007282,4.70e-07,71;UBERON:0004290,4.70e-07,71;UBERON:0009618,4.70e-07,71;UBERON:0003077,6.21e-07,72;UBERON:0007285,6.21e-07,72;UBERON:0007524,8.14e-07,73;UBERON:0002067,9.65e-07,9;UBERON:0004016,9.65e-07,9;UBERON:0010083,9.65e-07,9 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0.236482229888585,1.03423704220986,0,0,0,0,0,0.306083892370903,0.641858054152187,1.91801137739712,0,0.199463657621632,0.852449501065388,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,1.5608003841516,0.570471821544449,1.49448680551801,3.52303495931295,0.323745888736263,0.561803226808994,0.816616685019573,0,3.51307655997603,0,0,0,0,0.168336113954066,0.625592599359821,1.10825646193673,0,0,0,0,0,0.213557388818567,0.635795703478686,0,0.618315175430633,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96551892047969,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2080403990784,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,10.7296933755565,3.381211010224,0,0,0,0,0,0.285955987316295,0.542621605391443,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25897397617015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.328508624055237,0,0,10.877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.462145851343933,2.14905144616581,1.10269257987624,44.9016623549384,9.57110179833908,1.36362603865761,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,1.07923474549989,0.274537029736055,0.706874414074119,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,1.35357396370308,0.588187602953219,1.00692952185506,0.75901493089674,0.317873157960757,0,0,0.989471500037586,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,25.4486814322951,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,4.80831033108706,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,7.30336388246517,0,0,0,0,0,4.2322147241232,0,0,0,0,0.218531143927391,0,0.101988829741982,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.286888821570705,0,0,0,1.9307228228694,0,4.69281884806909,0,0,0,0,0 | |||
|short_description=p@chr3:24547235..24547267,- | |||
}} |
Revision as of 23:44, 12 September 2013
Short description: | p@chr3:24547235..24547267, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:24547235..24547267, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle satellite cell | 4.94e-20 | 3 |
cell of skeletal muscle | 1.95e-17 | 9 |
outer root sheath cell | 4.54e-14 | 2 |
fibroblast of dermis | 6.89e-10 | 6 |
mesenchymal stem cell of adipose | 1.01e-07 | 8 |
stromal cell of pancreas | 1.22e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 4.54e-14 | 2 |
hair outer root sheath | 4.54e-14 | 2 |
bulb of hair follicle | 4.54e-14 | 2 |
intestine | 1.40e-08 | 17 |
gastrointestinal system | 2.90e-08 | 25 |
somite | 4.70e-07 | 71 |
presomitic mesoderm | 4.70e-07 | 71 |
presumptive segmental plate | 4.70e-07 | 71 |
dermomyotome | 4.70e-07 | 71 |
trunk paraxial mesoderm | 4.70e-07 | 71 |
paraxial mesoderm | 6.21e-07 | 72 |
presumptive paraxial mesoderm | 6.21e-07 | 72 |
dense mesenchyme tissue | 8.14e-07 | 73 |
dermis | 9.65e-07 | 9 |
dermatome | 9.65e-07 | 9 |
future dermis | 9.65e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.53e-07 | 8 |
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