FFCP PHASE1:Mm9::chr13:17897362..17897374,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=517|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:17897362..17897374,+|id=chr13:17897362..17897374,+|ontology_enrichment_celltype=CL:0000063!7.98e-11!66;CL:0002563!1.11e-07!9;CL:0002251!1.11e-07!9;CL:0000066!1.16e-07!25;CL:0000988!2.85e-07!32;CL:0002032!2.85e-07!32;CL:0000037!2.85e-07!32;CL:0000566!2.85e-07!32;CL:0000837!2.85e-07!32|ontology_enrichment_celltype_v019_2=CL:0002563,2.03e-15,9;CL:0002251,2.03e-15,9;CL:0000791,7.77e-15,9;CL:0000789,7.77e-15,9;CL:0002420,7.77e-15,9;CL:0002419,7.77e-15,9;CL:0000790,7.77e-15,9;CL:0000988,1.65e-14,32;CL:0002032,1.65e-14,32;CL:0000037,1.65e-14,32;CL:0000837,1.65e-14,32;CL:0000838,3.74e-14,12;CL:0000542,5.76e-13,13;CL:0000051,5.76e-13,13;CL:0000624,8.85e-13,8;CL:0000034,4.79e-12,97;CL:0000084,5.80e-12,11;CL:0000827,5.80e-12,11;CL:0002076,2.99e-11,15;CL:0002320,7.66e-11,46;CL:0000134,7.66e-11,46;CL:0000723,1.08e-10,91;CL:0000048,1.08e-10,91;CL:0000223,2.11e-10,20;CL:0002250,8.14e-10,3;CL:0002031,8.61e-10,25;CL:0000738,1.30e-09,17;CL:0002087,1.30e-09,17;CL:0000219,9.07e-09,54;CL:0000066,5.31e-08,25;CL:0000239,5.95e-08,6;CL:0000677,5.95e-08,6;CL:0000584,5.95e-08,6;CL:0000893,6.21e-08,6;CL:0002489,6.21e-08,6;CL:0000898,6.21e-08,6;CL:0000809,6.21e-08,6;CL:0000810,6.21e-08,6;CL:0000895,6.21e-08,6;CL:0000808,6.21e-08,6;CL:0000894,6.21e-08,6;CL:0000806,6.21e-08,6;CL:0000807,6.21e-08,6;CL:0000805,6.21e-08,6;CL:0002425,6.21e-08,6;CL:0002436,6.21e-08,6;CL:0002427,6.21e-08,6;CL:0002428,6.21e-08,6;CL:0002429,6.21e-08,6;CL:0002433,6.21e-08,6;CL:0002431,6.21e-08,6;CL:0002432,6.21e-08,6;CL:0000075,8.15e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,3.58e-08,6|ontology_enrichment_uberon=UBERON:0000485!4.14e-08!11;UBERON:0003350!1.11e-07!9;UBERON:0004808!1.11e-07!9;UBERON:0001277!1.11e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.03e-15,9;UBERON:0004808,2.03e-15,9;UBERON:0001277,2.03e-15,9;UBERON:0000485,1.97e-12,11;UBERON:0002384,7.66e-11,46;UBERON:0001242,2.31e-10,13;UBERON:0001262,2.31e-10,13;UBERON:0004786,2.31e-10,13;UBERON:0000344,7.59e-09,15|phase1_expression=0.320297694209588,1.04692622291808,0.909998478779072,3.93203474698879,5.50985302940982,0.839396359559449,1.86890112476421,2.32421982194837,2.111830832275,1.63845168425395,0.34243593645101,0.0797721589953364,3.93761678841773,1.83582845079895,0,0.202475267389826,0,0,0.274228867211478,0.42438965179803,0,0.0992909512008853,0.261199789138935,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,3.17515336729816,2.46025915033828,0,6.35473563452804,1.49611180822643,7.35009682544529,2.51118978442145,0.7813353445238,2.09409497589519,6.47054636834116,0.683045484958446,0,0,0.202753862439029,0.367093504323363,0,0.218025156380447,0,0,0,0,2.01339127269284,3.62681071005672,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0.244981598429908,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0.279182999001381,0,0,0,0.142371680799103,0,0.151452386666368,0,4.92769630792852,0,0.679971333707751,0,0,0.448026887097336,0,0.170430322578058,0,0.35333957451034,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,1.01104889002957,0.11418387971906,1.29468941823586,0.148442139064825,0.346970653532272,0.608930956624282,0,0,0.117588707135705,0.628332956648377,0.494389935468748,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,1.31796636956512,2.39961092397363,0.508280908292259,0.149790639404823,0,0.125654352112864,0.173824320192276,0.511430914660661,0,0.162241263067758,0.203678727700633,0,0.252722758433675,0,0.260240885925407,0.459804208866946,0.360124259610698,0,0.272145996605311,0.2562274405697,0,0,0.215567992932842,0.189106080167819,0,0,0.278047249225598,0,0,0.199034266818493,0.702213187313235,1.28673953557358,1.13665399758237,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0,0,0.350296027101508,0.329119699826961,0,0,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0.411618449517138,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0.667134131534611,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0.210407459670956,0.379419222745544,0.295220295959204,0,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0.37898282354097,0.325929952884052,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0.35163505977661,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0,0.668396022247182,0,0.404810701674894,0.292255857911312,1.58115111178609,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,2.10837217149998,0,0,0,0.517434735131018,0,0.354680467284547,0,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0.2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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=517 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:17897362..17897374,+ | |||
|id=chr13:17897362..17897374,+ | |||
|ontology_enrichment_celltype=CL:0000063!7.98e-11!66;CL:0002563!1.11e-07!9;CL:0002251!1.11e-07!9;CL:0000066!1.16e-07!25;CL:0000988!2.85e-07!32;CL:0002032!2.85e-07!32;CL:0000037!2.85e-07!32;CL:0000566!2.85e-07!32;CL:0000837!2.85e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.03e-15,9;CL:0002251,2.03e-15,9;CL:0000791,7.77e-15,9;CL:0000789,7.77e-15,9;CL:0002420,7.77e-15,9;CL:0002419,7.77e-15,9;CL:0000790,7.77e-15,9;CL:0000988,1.65e-14,32;CL:0002032,1.65e-14,32;CL:0000037,1.65e-14,32;CL:0000837,1.65e-14,32;CL:0000838,3.74e-14,12;CL:0000542,5.76e-13,13;CL:0000051,5.76e-13,13;CL:0000624,8.85e-13,8;CL:0000034,4.79e-12,97;CL:0000084,5.80e-12,11;CL:0000827,5.80e-12,11;CL:0002076,2.99e-11,15;CL:0002320,7.66e-11,46;CL:0000134,7.66e-11,46;CL:0000723,1.08e-10,91;CL:0000048,1.08e-10,91;CL:0000223,2.11e-10,20;CL:0002250,8.14e-10,3;CL:0002031,8.61e-10,25;CL:0000738,1.30e-09,17;CL:0002087,1.30e-09,17;CL:0000219,9.07e-09,54;CL:0000066,5.31e-08,25;CL:0000239,5.95e-08,6;CL:0000677,5.95e-08,6;CL:0000584,5.95e-08,6;CL:0000893,6.21e-08,6;CL:0002489,6.21e-08,6;CL:0000898,6.21e-08,6;CL:0000809,6.21e-08,6;CL:0000810,6.21e-08,6;CL:0000895,6.21e-08,6;CL:0000808,6.21e-08,6;CL:0000894,6.21e-08,6;CL:0000806,6.21e-08,6;CL:0000807,6.21e-08,6;CL:0000805,6.21e-08,6;CL:0002425,6.21e-08,6;CL:0002436,6.21e-08,6;CL:0002427,6.21e-08,6;CL:0002428,6.21e-08,6;CL:0002429,6.21e-08,6;CL:0002433,6.21e-08,6;CL:0002431,6.21e-08,6;CL:0002432,6.21e-08,6;CL:0000075,8.15e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,3.58e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000485!4.14e-08!11;UBERON:0003350!1.11e-07!9;UBERON:0004808!1.11e-07!9;UBERON:0001277!1.11e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.03e-15,9;UBERON:0004808,2.03e-15,9;UBERON:0001277,2.03e-15,9;UBERON:0000485,1.97e-12,11;UBERON:0002384,7.66e-11,46;UBERON:0001242,2.31e-10,13;UBERON:0001262,2.31e-10,13;UBERON:0004786,2.31e-10,13;UBERON:0000344,7.59e-09,15 | |||
|phase1_expression=0.320297694209588,1.04692622291808,0.909998478779072,3.93203474698879,5.50985302940982,0.839396359559449,1.86890112476421,2.32421982194837,2.111830832275,1.63845168425395,0.34243593645101,0.0797721589953364,3.93761678841773,1.83582845079895,0,0.202475267389826,0,0,0.274228867211478,0.42438965179803,0,0.0992909512008853,0.261199789138935,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,3.17515336729816,2.46025915033828,0,6.35473563452804,1.49611180822643,7.35009682544529,2.51118978442145,0.7813353445238,2.09409497589519,6.47054636834116,0.683045484958446,0,0,0.202753862439029,0.367093504323363,0,0.218025156380447,0,0,0,0,2.01339127269284,3.62681071005672,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0.244981598429908,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0.279182999001381,0,0,0,0.142371680799103,0,0.151452386666368,0,4.92769630792852,0,0.679971333707751,0,0,0.448026887097336,0,0.170430322578058,0,0.35333957451034,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,1.01104889002957,0.11418387971906,1.29468941823586,0.148442139064825,0.346970653532272,0.608930956624282,0,0,0.117588707135705,0.628332956648377,0.494389935468748,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,1.31796636956512,2.39961092397363,0.508280908292259,0.149790639404823,0,0.125654352112864,0.173824320192276,0.511430914660661,0,0.162241263067758,0.203678727700633,0,0.252722758433675,0,0.260240885925407,0.459804208866946,0.360124259610698,0,0.272145996605311,0.2562274405697,0,0,0.215567992932842,0.189106080167819,0,0,0.278047249225598,0,0,0.199034266818493,0.702213187313235,1.28673953557358,1.13665399758237,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0,0,0.350296027101508,0.329119699826961,0,0,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0.411618449517138,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0.667134131534611,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0.210407459670956,0.379419222745544,0.295220295959204,0,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0.37898282354097,0.325929952884052,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0,0.35163505977661,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0,0.668396022247182,0,0.404810701674894,0.292255857911312,1.58115111178609,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,2.10837217149998,0,0,0,0.517434735131018,0,0.354680467284547,0,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,1.01987057996313,1.53946597556024,0.552799895217695,0,0,0,0.108005340821801,0.209088296014469,0,0.404593039154462,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.5208175393758,0.314578033277133,0,0,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0.228620419965,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0.755393897389701,0,0.45032120322422,0.906284817968409,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr13:17897362..17897374,+ | |||
}} |
Revision as of 00:04, 13 September 2013
Short description: | p@chr13:17897362..17897374, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:17897362..17897374, + |
Coexpression cluster: | MCL_coexpression_mm9:517 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.03e-15 | 9 |
gastrointestinal system epithelium | 2.03e-15 | 9 |
intestinal epithelium | 2.03e-15 | 9 |
simple columnar epithelium | 1.97e-12 | 11 |
connective tissue | 7.66e-11 | 46 |
intestinal mucosa | 2.31e-10 | 13 |
wall of intestine | 2.31e-10 | 13 |
gastrointestinal system mucosa | 2.31e-10 | 13 |
mucosa | 7.59e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 3.58e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.