FFCP PHASE1:Hg19::chr3:48514924..48514935,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51246|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30376|TSSclassifier=S|UniProt=|association_with_transcript=5bp_to_ENST00000465449,uc011bbk.1_5end|coexpression_cluster_id=C304|description=CAGE_peak_14_at_SHISA5_5end|id=chr3:48514924..48514935,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;1.90e-27;12!CL:0002563;7.15e-10;4|ontology_enrichment_celltype_v019_2=CL:0000182,1.99e-27,12;CL:0000223,1.81e-11,58;CL:0002563,8.56e-10,4|ontology_enrichment_development_v019=UBERON:0004161;7.86e-30;11!UBERON:0009497;3.42e-25;13!UBERON:0003104;6.08e-14;31!UBERON:0001041;1.10e-10;30!CL:0000223;3.26e-07;58|ontology_enrichment_disease=DOID:305!4.94e-09!106;DOID:0050687!2.93e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,4.38e-07,106|ontology_enrichment_uberon=UBERON:0005409!4.73e-07!35|ontology_enrichment_uberon_v019=UBERON:0002107;4.73e-30;19!UBERON:0006925;4.73e-30;19!UBERON:0002423;1.28e-22;25!UBERON:0005409;2.23e-18;22!UBERON:0000160;1.55e-17;17!UBERON:0002365;2.11e-17;31!UBERON:0002330;2.11e-17;31!UBERON:0002368;4.83e-15;33!UBERON:0001007;1.33e-12;81!UBERON:0004921;1.52e-11;33!UBERON:0000949;8.52e-11;43!UBERON:0001242;7.15e-10;4!UBERON:0001262;7.15e-10;4!UBERON:0004786;7.15e-10;4!UBERON:0004808;7.15e-10;4!UBERON:0001277;7.15e-10;4!UBERON:0001155;1.71e-09;9!UBERON:0005172;5.98e-09;52!UBERON:0005173;5.98e-09;52!UBERON:0002108;2.99e-08;4!UBERON:0002417;5.64e-08;58!UBERON:0000916;5.64e-08;58!UBERON:0000059;7.37e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.56e-30,19;UBERON:0006925,4.56e-30,19;UBERON:0008836,4.56e-30,19;UBERON:0008835,7.64e-26,22;UBERON:0003894,7.64e-26,22;UBERON:0009854,1.11e-24,23;UBERON:0007499,1.25e-22,25;UBERON:0009497,1.25e-22,25;UBERON:0000015,1.25e-22,25;UBERON:0002423,1.25e-22,25;UBERON:0006235,1.25e-22,25;UBERON:0004161,1.25e-22,25;UBERON:0009856,1.01e-21,26;UBERON:0002365,4.58e-18,31;UBERON:0002330,4.58e-18,31;UBERON:0000160,1.67e-17,17;UBERON:0005409,4.25e-16,25;UBERON:0002368,6.87e-16,35;UBERON:0003929,1.97e-15,54;UBERON:0004921,1.13e-14,118;UBERON:0001007,2.88e-13,145;UBERON:0001555,2.88e-13,145;UBERON:0007026,2.88e-13,145;UBERON:0005172,1.47e-12,54;UBERON:0005173,1.47e-12,54;UBERON:0000949,3.89e-12,45;UBERON:0004119,8.80e-12,160;UBERON:0000925,8.80e-12,160;UBERON:0006595,8.80e-12,160;UBERON:0002417,3.54e-11,60;UBERON:0000916,3.54e-11,60;UBERON:0001242,8.56e-10,4;UBERON:0001262,8.56e-10,4;UBERON:0004786,8.56e-10,4;UBERON:0004808,8.56e-10,4;UBERON:0001277,8.56e-10,4;UBERON:0005911,1.19e-09,82;UBERON:0001155,1.73e-09,9;UBERON:0002530,5.15e-09,59;UBERON:0002108,2.94e-08,4;UBERON:0000059,7.47e-08,11;UBERON:0011216,1.34e-07,223;UBERON:0001041,2.83e-07,87|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0.382067028739756,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.265059536642971,0.232387885739037,0.414644220061482,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,7.60530208930985,0,1.18157981336281,0,1.10689594688802,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0.333698283423817,0,0,0,0,0,0,0.561421621224659,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0.140669416410513,0,0.16480387422676,0,0.19924798825107,0.276283915531148,2.51932747854276,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0.46112780877612,0,0.108647371922008,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51246 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30376 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENST00000465449,uc011bbk.1_5end | |||
|coexpression_cluster_id=C304 | |||
|description=CAGE_peak_14_at_SHISA5_5end | |||
|id=chr3:48514924..48514935,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.90e-27;12!CL:0002563;7.15e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.99e-27,12;CL:0000223,1.81e-11,58;CL:0002563,8.56e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.86e-30;11!UBERON:0009497;3.42e-25;13!UBERON:0003104;6.08e-14;31!UBERON:0001041;1.10e-10;30!CL:0000223;3.26e-07;58 | |||
|ontology_enrichment_disease=DOID:305!4.94e-09!106;DOID:0050687!2.93e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.38e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005409!4.73e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.73e-30;19!UBERON:0006925;4.73e-30;19!UBERON:0002423;1.28e-22;25!UBERON:0005409;2.23e-18;22!UBERON:0000160;1.55e-17;17!UBERON:0002365;2.11e-17;31!UBERON:0002330;2.11e-17;31!UBERON:0002368;4.83e-15;33!UBERON:0001007;1.33e-12;81!UBERON:0004921;1.52e-11;33!UBERON:0000949;8.52e-11;43!UBERON:0001242;7.15e-10;4!UBERON:0001262;7.15e-10;4!UBERON:0004786;7.15e-10;4!UBERON:0004808;7.15e-10;4!UBERON:0001277;7.15e-10;4!UBERON:0001155;1.71e-09;9!UBERON:0005172;5.98e-09;52!UBERON:0005173;5.98e-09;52!UBERON:0002108;2.99e-08;4!UBERON:0002417;5.64e-08;58!UBERON:0000916;5.64e-08;58!UBERON:0000059;7.37e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.56e-30,19;UBERON:0006925,4.56e-30,19;UBERON:0008836,4.56e-30,19;UBERON:0008835,7.64e-26,22;UBERON:0003894,7.64e-26,22;UBERON:0009854,1.11e-24,23;UBERON:0007499,1.25e-22,25;UBERON:0009497,1.25e-22,25;UBERON:0000015,1.25e-22,25;UBERON:0002423,1.25e-22,25;UBERON:0006235,1.25e-22,25;UBERON:0004161,1.25e-22,25;UBERON:0009856,1.01e-21,26;UBERON:0002365,4.58e-18,31;UBERON:0002330,4.58e-18,31;UBERON:0000160,1.67e-17,17;UBERON:0005409,4.25e-16,25;UBERON:0002368,6.87e-16,35;UBERON:0003929,1.97e-15,54;UBERON:0004921,1.13e-14,118;UBERON:0001007,2.88e-13,145;UBERON:0001555,2.88e-13,145;UBERON:0007026,2.88e-13,145;UBERON:0005172,1.47e-12,54;UBERON:0005173,1.47e-12,54;UBERON:0000949,3.89e-12,45;UBERON:0004119,8.80e-12,160;UBERON:0000925,8.80e-12,160;UBERON:0006595,8.80e-12,160;UBERON:0002417,3.54e-11,60;UBERON:0000916,3.54e-11,60;UBERON:0001242,8.56e-10,4;UBERON:0001262,8.56e-10,4;UBERON:0004786,8.56e-10,4;UBERON:0004808,8.56e-10,4;UBERON:0001277,8.56e-10,4;UBERON:0005911,1.19e-09,82;UBERON:0001155,1.73e-09,9;UBERON:0002530,5.15e-09,59;UBERON:0002108,2.94e-08,4;UBERON:0000059,7.47e-08,11;UBERON:0011216,1.34e-07,223;UBERON:0001041,2.83e-07,87 | |||
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|short_description=p14@SHISA5 | |||
}} |
Revision as of 00:28, 13 September 2013
Short description: | p14@SHISA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_SHISA5_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | 5bp_to_ENST00000465449, uc011bbk.1_5end |
EntrezGene: | SHISA5 |
HGNC: | 30376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.99e-27 | 12 |
endodermal cell | 1.81e-11 | 58 |
intestinal epithelial cell | 8.56e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.38e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.