FFCP PHASE1:Mm9::chr17:29505934..29505953,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26382|HGNC=|MCL_coexpression_id=477|UniProt=|association_with_transcript=10bp_to_ENSMUST00000140918_5end|description=CAGE_peak_5_at_Fgd2_5end|id=chr17:29505934..29505953,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!5.99e-10!17;UBERON:0005181!5.99e-10!17;UBERON:0002224!5.99e-10!17;UBERON:0000915!5.99e-10!17;UBERON:0008947!5.99e-10!17;UBERON:0003258!5.99e-10!17;UBERON:0005153!1.11e-09!17;UBERON:0002048!1.56e-09!14;UBERON:0000117!1.56e-09!14;UBERON:0000171!1.56e-09!14;UBERON:0000170!1.56e-09!14;UBERON:0005597!1.56e-09!14;UBERON:0000118!1.56e-09!14;UBERON:0000007!3.84e-08!8;UBERON:0003296!3.84e-08!8;UBERON:0010133!3.84e-08!8;UBERON:0001894!5.01e-08!10;UBERON:0006222!5.01e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.85e-23,8;UBERON:0003296,2.85e-23,8;UBERON:0010133,2.85e-23,8;UBERON:0001894,2.53e-18,10;UBERON:0006222,2.53e-18,10;UBERON:0001264,1.35e-12,12;UBERON:0005153,6.21e-09,17;UBERON:0002048,1.92e-08,14;UBERON:0000117,1.92e-08,14;UBERON:0000171,1.92e-08,14;UBERON:0000170,1.92e-08,14;UBERON:0005597,1.92e-08,14;UBERON:0000118,1.92e-08,14;UBERON:0002075,1.69e-07,19;UBERON:0005157,2.12e-07,20;UBERON:0005178,8.77e-07,17;UBERON:0005181,8.77e-07,17;UBERON:0002224,8.77e-07,17;UBERON:0000915,8.77e-07,17;UBERON:0008947,8.77e-07,17;UBERON:0003258,8.77e-07,17|phase1_expression=2.24208385946712,0,0,0,0,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0.244981598429908,0.191690942036473,1.83843757322004,0,0.127687338085188,0.153606533256243,0.395658863190582,0.274462930807229,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,3.94361575374705,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0.628271760564322,0.695297280769106,1.02286182932132,0.20778804455956,0.324482526135515,0.509196819251581,0.124406970610093,0.758168275301024,0,0.390361328888111,0.229902104433473,0,0,0,0,0,0,0,0.378212160335639,0.175951124163949,0.43839146485515,0.834141747676794,0,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0.213288250535234,0.696710015581316,0.515469845288373,0.605050573870028,0.667134131534611,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0,0.898819408654221,0,0,0.758671603812327,0.228497025219458,0,1.4255592949172,0.193952487167626,0.280543279561274,0.505892296994058,0,0.470996183524124,0.246794327843601,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0.757965647081939,0.488894929326078,1.35796068620151,1.40814148973101,2.34508760418542,2.61848004974615,1.36593553500459,1.26108115284953,1.10732344824387,0.637819074629948,0.81931657357869,0.345369963731791,0.578596234326046,0,0,3.44234991113325,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0.164970122972535,0,1.21390318077491,1.209294227859,1.69744571780308,1.18120757152309,2.15204603560749,1.55056975900933,1.09060118843252,1.06949213515416,0.948110273807448,0,0,8.5109901438447,3.06103859853227,5.56242340265844,7.07312215604255,6.7389288784064,6.42127743367454,5.26556865926787,7.00269382963578,0,0,0,0,0.161464426695906,0.603129249281559,0.477489376012546,0.656563598980245,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.540026704109006,0.418176592028937,0.655087691238533,0.404593039154462,0.41326727862668,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0.39061315453185,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0.460325236507177,1.14579102687879,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0,0,1.01078884705519,0.25347929989024,0,0.187283014939765,0.256100609619477,0.34461281373368,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.338458431566706,0.914639864363863,0,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p5@Fgd2}} | ||
|EntrezGene=26382 | |||
|HGNC= | |||
|MCL_coexpression_id=477 | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENSMUST00000140918_5end | |||
|description=CAGE_peak_5_at_Fgd2_5end | |||
|id=chr17:29505934..29505953,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!5.99e-10!17;UBERON:0005181!5.99e-10!17;UBERON:0002224!5.99e-10!17;UBERON:0000915!5.99e-10!17;UBERON:0008947!5.99e-10!17;UBERON:0003258!5.99e-10!17;UBERON:0005153!1.11e-09!17;UBERON:0002048!1.56e-09!14;UBERON:0000117!1.56e-09!14;UBERON:0000171!1.56e-09!14;UBERON:0000170!1.56e-09!14;UBERON:0005597!1.56e-09!14;UBERON:0000118!1.56e-09!14;UBERON:0000007!3.84e-08!8;UBERON:0003296!3.84e-08!8;UBERON:0010133!3.84e-08!8;UBERON:0001894!5.01e-08!10;UBERON:0006222!5.01e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.85e-23,8;UBERON:0003296,2.85e-23,8;UBERON:0010133,2.85e-23,8;UBERON:0001894,2.53e-18,10;UBERON:0006222,2.53e-18,10;UBERON:0001264,1.35e-12,12;UBERON:0005153,6.21e-09,17;UBERON:0002048,1.92e-08,14;UBERON:0000117,1.92e-08,14;UBERON:0000171,1.92e-08,14;UBERON:0000170,1.92e-08,14;UBERON:0005597,1.92e-08,14;UBERON:0000118,1.92e-08,14;UBERON:0002075,1.69e-07,19;UBERON:0005157,2.12e-07,20;UBERON:0005178,8.77e-07,17;UBERON:0005181,8.77e-07,17;UBERON:0002224,8.77e-07,17;UBERON:0000915,8.77e-07,17;UBERON:0008947,8.77e-07,17;UBERON:0003258,8.77e-07,17 | |||
|phase1_expression=2.24208385946712,0,0,0,0,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0.244981598429908,0.191690942036473,1.83843757322004,0,0.127687338085188,0.153606533256243,0.395658863190582,0.274462930807229,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,3.94361575374705,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0.628271760564322,0.695297280769106,1.02286182932132,0.20778804455956,0.324482526135515,0.509196819251581,0.124406970610093,0.758168275301024,0,0.390361328888111,0.229902104433473,0,0,0,0,0,0,0,0.378212160335639,0.175951124163949,0.43839146485515,0.834141747676794,0,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0.213288250535234,0.696710015581316,0.515469845288373,0.605050573870028,0.667134131534611,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0,0.898819408654221,0,0,0.758671603812327,0.228497025219458,0,1.4255592949172,0.193952487167626,0.280543279561274,0.505892296994058,0,0.470996183524124,0.246794327843601,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0.757965647081939,0.488894929326078,1.35796068620151,1.40814148973101,2.34508760418542,2.61848004974615,1.36593553500459,1.26108115284953,1.10732344824387,0.637819074629948,0.81931657357869,0.345369963731791,0.578596234326046,0,0,3.44234991113325,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0.164970122972535,0,1.21390318077491,1.209294227859,1.69744571780308,1.18120757152309,2.15204603560749,1.55056975900933,1.09060118843252,1.06949213515416,0.948110273807448,0,0,8.5109901438447,3.06103859853227,5.56242340265844,7.07312215604255,6.7389288784064,6.42127743367454,5.26556865926787,7.00269382963578,0,0,0,0,0.161464426695906,0.603129249281559,0.477489376012546,0.656563598980245,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.540026704109006,0.418176592028937,0.655087691238533,0.404593039154462,0.41326727862668,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0.39061315453185,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0.460325236507177,1.14579102687879,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0,0,1.01078884705519,0.25347929989024,0,0.187283014939765,0.256100609619477,0.34461281373368,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.338458431566706,0.914639864363863,0,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Fgd2 | |||
}} |
Revision as of 13:59, 13 September 2013
Short description: | p5@Fgd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Fgd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:477 |
Association with transcript: | 10bp_to_ENSMUST00000140918_5end |
EntrezGene: | Fgd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.85e-23 | 8 |
gland of diencephalon | 2.85e-23 | 8 |
neuroendocrine gland | 2.85e-23 | 8 |
diencephalon | 2.53e-18 | 10 |
future diencephalon | 2.53e-18 | 10 |
pancreas | 1.35e-12 | 12 |
epithelial bud | 6.21e-09 | 17 |
lung | 1.92e-08 | 14 |
respiratory tube | 1.92e-08 | 14 |
respiration organ | 1.92e-08 | 14 |
pair of lungs | 1.92e-08 | 14 |
lung primordium | 1.92e-08 | 14 |
lung bud | 1.92e-08 | 14 |
viscus | 1.69e-07 | 19 |
epithelial fold | 2.12e-07 | 20 |
thoracic cavity element | 8.77e-07 | 17 |
thoracic segment organ | 8.77e-07 | 17 |
thoracic cavity | 8.77e-07 | 17 |
thoracic segment of trunk | 8.77e-07 | 17 |
respiratory primordium | 8.77e-07 | 17 |
endoderm of foregut | 8.77e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.