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FFCP PHASE1:Mm9::chr17:36394802..36394816,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=67676|HGNC=|MCL_coexpression_id=1280|UniProt=Q80XY2|association_with_transcript=-1bp_to_ENSMUST00000077535_5end|description=CAGE_peak_2_at_Rpp21_5end|id=chr17:36394802..36394816,-|ontology_enrichment_celltype=CL:0002371!1.01e-18!118;CL:0000144!1.06e-17!121;CL:0000012!1.06e-17!121;CL:0000548!2.36e-17!115;CL:0000004!2.36e-17!115;CL:0000255!2.36e-17!115;CL:0000723!8.26e-14!91;CL:0000048!8.26e-14!91;CL:0000034!3.81e-13!97;CL:0000117!1.42e-12!23;CL:0000337!1.42e-12!23;CL:0000221!1.81e-12!44;CL:0000133!1.81e-12!44;CL:0002319!2.72e-12!43;CL:0000055!1.39e-10!50;CL:0002321!6.66e-10!70;CL:0000220!6.66e-10!70;CL:0000540!7.49e-09!33;CL:0000047!7.49e-09!33;CL:0000031!7.49e-09!33;CL:0000404!7.49e-09!33;CL:0000393!3.04e-07!39;CL:0000211!3.04e-07!39;CL:0000063!5.50e-07!66|ontology_enrichment_celltype_v019_2=CL:0000723,8.22e-14,91;CL:0000048,8.22e-14,91;CL:0000034,3.80e-13,97;CL:0000117,1.42e-12,23;CL:0000337,1.42e-12,23;CL:0000221,1.81e-12,44;CL:0000133,1.81e-12,44;CL:0002319,2.72e-12,43;CL:0002321,6.66e-10,70;CL:0000540,7.49e-09,33;CL:0000047,7.49e-09,33;CL:0000031,7.49e-09,33;CL:0000404,7.49e-09,33;CL:0000393,3.04e-07,39;CL:0000211,3.04e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.16e-10!75;UBERON:0001016!4.16e-10!75;UBERON:0001017!1.71e-09!73;UBERON:0005743!1.71e-09!73;UBERON:0002020!1.62e-08!34;UBERON:0001049!7.88e-07!52;UBERON:0005068!7.88e-07!52;UBERON:0006241!7.88e-07!52;UBERON:0007135!7.88e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.16e-10,75;UBERON:0001017,1.71e-09,73;UBERON:0002020,1.62e-08,34;UBERON:0000073,1.03e-07,54;UBERON:0001049,7.88e-07,52;UBERON:0005068,7.88e-07,52;UBERON:0006241,7.88e-07,52;UBERON:0007135,7.88e-07,52|phase1_expression=5.2849119544582,6.97950815278722,4.09499315450582,3.93203474698879,4.50806156951712,5.37213670118047,4.43864017131499,8.90950931746876,2.67498572088167,2.80877431586392,8.90333434772626,7.33903862757095,7.53283211697305,9.17914225399473,4.99664642723494,5.66930748691513,5.59649502502517,6.30924330716475,6.17014951225825,6.79023442876848,7.22867966284093,4.86525660884338,2.61199789138935,8.47959840805055,5.96464130774642,6.31655160526522,10.3382879078178,5.60225204983311,12.1614988452079,7.81293402255785,8.86922042621219,6.98533740805594,9.22597181376855,0,10.1098066912946,13.1325369833209,14.2918549383658,13.393012183581,10.1573594788094,7.32933241563318,16.4704816648684,10.2456822743767,11.1667381197165,4.15459499319405,3.64956952390252,3.12029478674859,18.7773922643529,13.5175596955877,5.05278220289285,6.22175677037707,7.69925318939494,10.062679505548,5.5368259999053,7.97898356212479,4.7053131879945,5.40244815675489,6.30373567865265,5.15672092277442,12.1389876515759,13.7537654610729,15.2119536841483,10.165335962074,10.6715375533337,21.5975932147536,17.7995945262055,16.3410426437603,10.4860038681442,13.0634223809329,6.84351441235953,11.7455166348571,8.2026734927039,17.424710048632,15.6816664075646,7.7169203505421,9.00947427571422,14.7075005857603,7.70811166995721,8.55505165170758,10.1380311949121,12.924856197559,14.1805847583735,14.5855743755893,15.6342479440773,12.380777420697,7.48711414106369,16.7938293719991,13.0981946335175,12.3023634244698,8.40560745998343,7.55715601067855,2.89864488701678,6.0229671388697,2.03991400112325,10.2543606411185,1.94932925234301,2.68816132258401,5.47733238513832,6.81721290312231,9.87186817490901,9.18682893726885,6.61964072950398,6.41632387071589,2.54805239706646,14.2213340630666,13.4224445426953,10.6411143499541,11.62706223534,4.68153906848146,4.40194402200192,4.45326417194474,4.8575891494518,4.56698217468212,4.38169444786511,5.42601505989441,3.41007250693544,3.64433114856059,1.73036477414062,3.61498392299779,7.96149496754887,2.42650274921114,3.3126227769059,5.33362778448744,9.31958806090611,6.73395833126558,5.65506108396329,4.85368404896324,7.18890747035522,17.3971791988088,7.62421362438388,6.29120685500255,6.8625090422794,7.53926112677186,5.56237824615285,4.09144731728529,7.89594569326328,4.2182728397617,3.46253837091075,4.10543003013307,5.05445516867349,2.94618598241064,3.90361328888111,7.12696523743766,5.22180176435513,6.17889753126432,3.53789795586905,5.12454881139399,4.2165776051878,3.10444044886819,3.66465587985832,3.40390944302075,3.34307135911503,5.2606975782618,5.28289773528636,4.87553033131033,5.14455341019859,5.37392520409932,14.7464769335779,12.0953516343916,7.10408748488982,2.48550927042602,3.98694301967864,5.76198596675248,3.55117103377815,4.9191057936851,6.78775296704464,4.88321283975857,6.43856163359086,4.90414437942112,6.08871444679878,4.10418660197738,5.43161023957233,6.28659945928929,5.48875288227627,4.83143107537338,6.9395683026162,3.49875682089567,3.63460661282178,6.08236303326152,2.34617075588757,2.78684006232526,4.89696353023955,5.04208811558356,5.33707305227689,3.04361001780095,4.2707615539006,5.27036655116835,6.03204501120647,4.57599885694647,6.04388670069272,1.79763881730844,5.18731319699266,5.57595565112228,5.310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|EntrezGene=67676
|HGNC=
|MCL_coexpression_id=1280
|UniProt=Q80XY2
|association_with_transcript=-1bp_to_ENSMUST00000077535_5end
|description=CAGE_peak_2_at_Rpp21_5end
|id=chr17:36394802..36394816,-
|ontology_enrichment_celltype=CL:0002371!1.01e-18!118;CL:0000144!1.06e-17!121;CL:0000012!1.06e-17!121;CL:0000548!2.36e-17!115;CL:0000004!2.36e-17!115;CL:0000255!2.36e-17!115;CL:0000723!8.26e-14!91;CL:0000048!8.26e-14!91;CL:0000034!3.81e-13!97;CL:0000117!1.42e-12!23;CL:0000337!1.42e-12!23;CL:0000221!1.81e-12!44;CL:0000133!1.81e-12!44;CL:0002319!2.72e-12!43;CL:0000055!1.39e-10!50;CL:0002321!6.66e-10!70;CL:0000220!6.66e-10!70;CL:0000540!7.49e-09!33;CL:0000047!7.49e-09!33;CL:0000031!7.49e-09!33;CL:0000404!7.49e-09!33;CL:0000393!3.04e-07!39;CL:0000211!3.04e-07!39;CL:0000063!5.50e-07!66
|ontology_enrichment_celltype_v019_2=CL:0000723,8.22e-14,91;CL:0000048,8.22e-14,91;CL:0000034,3.80e-13,97;CL:0000117,1.42e-12,23;CL:0000337,1.42e-12,23;CL:0000221,1.81e-12,44;CL:0000133,1.81e-12,44;CL:0002319,2.72e-12,43;CL:0002321,6.66e-10,70;CL:0000540,7.49e-09,33;CL:0000047,7.49e-09,33;CL:0000031,7.49e-09,33;CL:0000404,7.49e-09,33;CL:0000393,3.04e-07,39;CL:0000211,3.04e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.16e-10!75;UBERON:0001016!4.16e-10!75;UBERON:0001017!1.71e-09!73;UBERON:0005743!1.71e-09!73;UBERON:0002020!1.62e-08!34;UBERON:0001049!7.88e-07!52;UBERON:0005068!7.88e-07!52;UBERON:0006241!7.88e-07!52;UBERON:0007135!7.88e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.16e-10,75;UBERON:0001017,1.71e-09,73;UBERON:0002020,1.62e-08,34;UBERON:0000073,1.03e-07,54;UBERON:0001049,7.88e-07,52;UBERON:0005068,7.88e-07,52;UBERON:0006241,7.88e-07,52;UBERON:0007135,7.88e-07,52
|phase1_expression=5.2849119544582,6.97950815278722,4.09499315450582,3.93203474698879,4.50806156951712,5.37213670118047,4.43864017131499,8.90950931746876,2.67498572088167,2.80877431586392,8.90333434772626,7.33903862757095,7.53283211697305,9.17914225399473,4.99664642723494,5.66930748691513,5.59649502502517,6.30924330716475,6.17014951225825,6.79023442876848,7.22867966284093,4.86525660884338,2.61199789138935,8.47959840805055,5.96464130774642,6.31655160526522,10.3382879078178,5.60225204983311,12.1614988452079,7.81293402255785,8.86922042621219,6.98533740805594,9.22597181376855,0,10.1098066912946,13.1325369833209,14.2918549383658,13.393012183581,10.1573594788094,7.32933241563318,16.4704816648684,10.2456822743767,11.1667381197165,4.15459499319405,3.64956952390252,3.12029478674859,18.7773922643529,13.5175596955877,5.05278220289285,6.22175677037707,7.69925318939494,10.062679505548,5.5368259999053,7.97898356212479,4.7053131879945,5.40244815675489,6.30373567865265,5.15672092277442,12.1389876515759,13.7537654610729,15.2119536841483,10.165335962074,10.6715375533337,21.5975932147536,17.7995945262055,16.3410426437603,10.4860038681442,13.0634223809329,6.84351441235953,11.7455166348571,8.2026734927039,17.424710048632,15.6816664075646,7.7169203505421,9.00947427571422,14.7075005857603,7.70811166995721,8.55505165170758,10.1380311949121,12.924856197559,14.1805847583735,14.5855743755893,15.6342479440773,12.380777420697,7.48711414106369,16.7938293719991,13.0981946335175,12.3023634244698,8.40560745998343,7.55715601067855,2.89864488701678,6.0229671388697,2.03991400112325,10.2543606411185,1.94932925234301,2.68816132258401,5.47733238513832,6.81721290312231,9.87186817490901,9.18682893726885,6.61964072950398,6.41632387071589,2.54805239706646,14.2213340630666,13.4224445426953,10.6411143499541,11.62706223534,4.68153906848146,4.40194402200192,4.45326417194474,4.8575891494518,4.56698217468212,4.38169444786511,5.42601505989441,3.41007250693544,3.64433114856059,1.73036477414062,3.61498392299779,7.96149496754887,2.42650274921114,3.3126227769059,5.33362778448744,9.31958806090611,6.73395833126558,5.65506108396329,4.85368404896324,7.18890747035522,17.3971791988088,7.62421362438388,6.29120685500255,6.8625090422794,7.53926112677186,5.56237824615285,4.09144731728529,7.89594569326328,4.2182728397617,3.46253837091075,4.10543003013307,5.05445516867349,2.94618598241064,3.90361328888111,7.12696523743766,5.22180176435513,6.17889753126432,3.53789795586905,5.12454881139399,4.2165776051878,3.10444044886819,3.66465587985832,3.40390944302075,3.34307135911503,5.2606975782618,5.28289773528636,4.87553033131033,5.14455341019859,5.37392520409932,14.7464769335779,12.0953516343916,7.10408748488982,2.48550927042602,3.98694301967864,5.76198596675248,3.55117103377815,4.9191057936851,6.78775296704464,4.88321283975857,6.43856163359086,4.90414437942112,6.08871444679878,4.10418660197738,5.43161023957233,6.28659945928929,5.48875288227627,4.83143107537338,6.9395683026162,3.49875682089567,3.63460661282178,6.08236303326152,2.34617075588757,2.78684006232526,4.89696353023955,5.04208811558356,5.33707305227689,3.04361001780095,4.2707615539006,5.27036655116835,6.03204501120647,4.57599885694647,6.04388670069272,1.79763881730844,5.18731319699266,5.57595565112228,5.31070122668629,4.11294645395024,4.50830942692322,5.49858585182348,5.62462212786115,3.08597607517402,4.42655759869801,3.69025369949005,4.70996183524124,4.56569506510662,3.55743152504579,3.83743743147016,3.34150291692445,4.49724224769707,5.47722327748958,5.30589751455317,4.32863948028414,2.30156909960649,2.43202840162553,5.21666685057355,0,3.34926852901653,2.49630138491648,2.77836765741823,3.04975602987251,1.92977408545347,2.58654466233247,6.63219941196697,5.21487924614483,3.39490171550376,6.33663670378956,3.85264392116176,3.33261097240419,3.12213836572478,2.67979744980525,3.98636441367795,0.956728611944923,3.11340297959902,4.31712454664739,3.61622646453779,4.52373851817817,13.053736411649,1.96705709207614,3.03530420935206,5.13761887960934,3.7507739709505,2.62295912602681,2.01976741763498,4.73262329124385,7.41833614163613,4.09304455692318,6.21318874676635,3.7875774594007,5.66153061577665,5.26253912177363,4.09158201075837,1.18586333383957,7.71171159412337,3.83238230062325,5.34196811001766,3.58351310577867,2.96946221350564,3.98235415019888,6.5550771761845,7.25576536715402,7.54420319023592,3.83892460745005,5.53383266299069,4.39328098385976,4.36240475373007,5.70395805415554,4.74055136903724,5.27093042874994,3.09406629744561,3.40439605753788,5.40183282093931,5.43306471887569,4.28674070063185,3.19212420556092,4.63758925765383,4.44282355625727,2.74018454203139,3.75474732901937,3.81297727554876,3.08739757276947,2.96795255294664,2.26050197374268,2.17126529741361,3.58117032009409,1.96969079694074,1.7488850197791,5.56275906031529,4.95525554313773,3.714963623338,2.96311243791539,3.20226376907975,4.78429797023588,2.28778173206523,4.41943917984024,3.91864066506242,3.86959926652387,6.68269432610579,5.06137589729817,3.25311147402958,5.61627772273367,5.01811910434725,4.58561383866973,3.50647300600534,3.30613822901344,4.71160695571253,7.38805347763219,2.4853572523477,37.2037339531566,4.18646328923141,3.14371131868485,2.91676782516071,5.42471258606471,4.73077151374179,3.52071715937262,1.8228613878153,3.56521771047417,11.8376219204743,13.2493802878618,6.00421129193539,4.25722952109345,6.36807934421929,4.67714962720062,4.47566739168704,3.57626438606277,4.92801343031872,4.57837534241189,5.35122184725182,3.12447907285499,4.13387359061046,3.80085734885034,4.04089734889384,4.09069157635491,7.02864189207155,5.10567692760349,9.33024108738547,5.20442310728643,5.60249822693352,3.37828455812128,2.38097111547445,4.93047271881851,3.51100472824754,2.25900737046827,6.44455331110048,8.02053718815155,8.76451229952807,2.74033007908257,6.0431511791176,7.42524750254986,7.65546045481175,4.98456649882625,6.73088405277366,5.60451676954554,7.18244772121856,4.26834014385335,4.37592090722929,5.44994222832754,5.51530525350042,5.11167473943715,3.91466608753899,7.38114182061175,5.30664144703975,5.83002389747551,5.09291121742406,4.21386783614471,5.69823856403337,4.36509564062661,2.85776214769844,3.47652977834566,3.8581844092741,4.12085900803307,4.41596760403192,6.17164654293748,6.92155644021416,4.5302876089991,3.63366041580821,4.42314087952054,4.65380343404221,4.39027134894654,3.15683653725411,4.48153575691344,4.48913817326191,3.91495559809775,3.54616136552028,6.13846564754534,4.49316839439301,5.01557188550968,4.99621155875892,3.27504251823572,4.51229213501426,2.48674831689496,3.97064554415128,2.78241402744506
|short_description=p2@Rpp21
}}

Revision as of 14:29, 13 September 2013

Short description:p2@Rpp21
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rpp21_5end
Coexpression cluster:MCL_coexpression_mm9:1280
Association with transcript: -1bp_to_ENSMUST00000077535_5end
EntrezGene:Rpp21
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rpp21

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.37
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.34
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.53
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.18
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.17
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I110.34
GP2+ M cell, pool3.CNhs13240.11847-124I25.60
Ileum epithelium, pool1.CNhs13199.10252-104B912.16
Ileum epithelium, pool2.CNhs13232.10253-104C17.81
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.11
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.13
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G813.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.52
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C312.14
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C721.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D216.34
Mouse Microglia, donor1.CNhs12629.11718-123C810.49
Mouse Microglia, donor2.CNhs12634.11736-123E813.06
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.20
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.68
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.30
Mouse Schwann, donor1.CNhs12507.11728-123D98.41
Mouse Schwann, donor2.CNhs12573.11746-123F97.56
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.68
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I33.64
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D117.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.62
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F17.54
cortex, adult.CNhs10473.12-14D55.56
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.11
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D46.18
eyeball, neonate N00.CNhs11207.633-15C63.54
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G84.22
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I65.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.10
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C66.79
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E34.90
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G15.43
heart, neonate N20.CNhs11127.821-26I66.29
heart, neonate N25.CNhs11196.1351-25D35.49
heart, neonate N30.CNhs11202.1390-42D24.83
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E95.27
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G15.58
kidney, embryo E14.CNhs10606.411-4I95.31
kidney, embryo E15.CNhs10997.434-16F84.11
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G73.09
kidney, neonate N10.CNhs11206.758-6D54.43
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G26.63
lung, embryo E14.CNhs10604.404-26F85.21
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B66.34
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.05
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.21
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I73.83
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F46.56
pancreas, embryo E15.CNhs11042.1556-45F27.26
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E65.40
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I53.58
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G24.96
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H14.78
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.87
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D45.62
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A93.31
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I17.39
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G537.20
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I55.42
testis, embryo E18.CNhs11027.503-18G54.73
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H311.84
testis, neonate N30.CNhs11130.1391-42E213.25
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I26.37
thymus, embryo E16.CNhs11002.456-26C54.68
thymus, embryo E17.CNhs10581.478-18C14.48
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F84.93
thymus, neonate N03.CNhs11137.2104-43C74.58
thymus, neonate N06.CNhs11197.681-26C45.35
thymus, neonate N07.CNhs11211.713-19D33.12
thymus, neonate N10.CNhs11194.748-24E44.13
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G74.04
thymus, neonate N30.CNhs11132.1393-42G24.09
tongue, adult.CNhs10499.32-1B47.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.33
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.20
urinary bladder, adult.CNhs10481.879-12E45.60
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I85.60
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
somatic stem cell8.22e-1491
multi fate stem cell8.22e-1491
stem cell3.80e-1397
CNS neuron (sensu Vertebrata)1.42e-1223
neuroblast (sensu Vertebrata)1.42e-1223
ectodermal cell1.81e-1244
neurectodermal cell1.81e-1244
neural cell2.72e-1243
embryonic cell6.66e-1070
neuron7.49e-0933
neuronal stem cell7.49e-0933
neuroblast7.49e-0933
electrically signaling cell7.49e-0933
electrically responsive cell3.04e-0739
electrically active cell3.04e-0739

Uber anatomy
Ontology termp-valuen
nervous system4.16e-1075
central nervous system1.71e-0973
gray matter1.62e-0834
regional part of nervous system1.03e-0754
neural tube7.88e-0752
neural rod7.88e-0752
future spinal cord7.88e-0752
neural keel7.88e-0752







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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