FFCP PHASE1:Mm9::chr19:11340595..11340604,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12482|HGNC=|MCL_coexpression_id=18|UniProt=P19437,Q542S5|association_with_transcript=36bp_to_ENSMUST00000169159,NM_007641,uc008grw.1,uc008grx.1_5end|description=CAGE_peak_3_at_Ms4a1_5end|id=chr19:11340595..11340604,-|ontology_enrichment_celltype=CL:0000553!1.63e-17!6;CL:0000556!1.63e-17!6;CL:0000050!2.00e-11!9;CL:0000414!3.31e-09!11;CL:0002027!3.46e-09!3;CL:0002006!3.46e-09!3;CL:0002024!3.46e-09!3;CL:0000839!1.14e-07!13|ontology_enrichment_celltype_v019_2=CL:0000553,3.47e-22,6;CL:0000556,3.47e-22,6;CL:0000050,6.35e-15,9;CL:0000839,1.98e-10,13;CL:0000945,1.73e-09,1;CL:0000236,1.73e-09,1;CL:0000826,1.73e-09,1;CL:0000763,1.59e-08,16;CL:0002031,2.97e-08,25;CL:0000049,3.24e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.68e-10!48;UBERON:0002405!7.10e-09!70;UBERON:0001474!8.65e-09!22;UBERON:0004765!8.65e-09!22;UBERON:0001434!8.65e-09!22;UBERON:0002465!9.89e-09!3;UBERON:0002106!4.92e-08!6;UBERON:0004457!4.92e-08!6;UBERON:0000042!4.92e-08!6;UBERON:0004854!4.92e-08!6;UBERON:0009034!4.92e-08!6;UBERON:0002095!4.92e-08!6;UBERON:0004782!4.92e-08!6;UBERON:0003281!4.92e-08!6;UBERON:0009664!4.92e-08!6;UBERON:0002296!4.92e-08!6;UBERON:0005602!4.92e-08!6;UBERON:0001179!4.92e-08!6;UBERON:0006293!4.92e-08!6;UBERON:0003887!5.07e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.14e-21,6;UBERON:0004457,3.14e-21,6;UBERON:0000042,3.14e-21,6;UBERON:0004854,3.14e-21,6;UBERON:0009034,3.14e-21,6;UBERON:0002095,3.14e-21,6;UBERON:0004782,3.14e-21,6;UBERON:0003281,3.14e-21,6;UBERON:0009664,3.14e-21,6;UBERON:0002296,3.14e-21,6;UBERON:0005602,3.14e-21,6;UBERON:0001179,3.14e-21,6;UBERON:0006293,3.14e-21,6;UBERON:0002193,5.82e-13,48;UBERON:0002405,5.82e-13,48;UBERON:0003887,6.72e-13,10;UBERON:0002390,6.31e-11,45;UBERON:0003061,6.31e-11,45;UBERON:0002075,2.40e-10,19;UBERON:0000029,2.09e-09,1;UBERON:0001097,2.09e-09,1;UBERON:0003968,2.09e-09,1;UBERON:0001467,2.09e-09,1;UBERON:0002371,1.59e-08,16;UBERON:0000945,3.55e-08,16;UBERON:0010039,3.55e-08,16|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.82227740650843,0.699561878128147,12.7762176970086,10.8320402548534,9.33657233955666,0,0,0,0.159992422793407,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.21465206048266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88406825470758,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0.318909537314974,0.655453258862952,0.345369963731791,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36696704638282,0,0,1.50694765603753,2.7338845544205,2.74533807847827,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Ms4a1}} | ||
|EntrezGene=12482 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=P19437,Q542S5 | |||
|association_with_transcript=36bp_to_ENSMUST00000169159,NM_007641,uc008grw.1,uc008grx.1_5end | |||
|description=CAGE_peak_3_at_Ms4a1_5end | |||
|id=chr19:11340595..11340604,- | |||
|ontology_enrichment_celltype=CL:0000553!1.63e-17!6;CL:0000556!1.63e-17!6;CL:0000050!2.00e-11!9;CL:0000414!3.31e-09!11;CL:0002027!3.46e-09!3;CL:0002006!3.46e-09!3;CL:0002024!3.46e-09!3;CL:0000839!1.14e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.47e-22,6;CL:0000556,3.47e-22,6;CL:0000050,6.35e-15,9;CL:0000839,1.98e-10,13;CL:0000945,1.73e-09,1;CL:0000236,1.73e-09,1;CL:0000826,1.73e-09,1;CL:0000763,1.59e-08,16;CL:0002031,2.97e-08,25;CL:0000049,3.24e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.68e-10!48;UBERON:0002405!7.10e-09!70;UBERON:0001474!8.65e-09!22;UBERON:0004765!8.65e-09!22;UBERON:0001434!8.65e-09!22;UBERON:0002465!9.89e-09!3;UBERON:0002106!4.92e-08!6;UBERON:0004457!4.92e-08!6;UBERON:0000042!4.92e-08!6;UBERON:0004854!4.92e-08!6;UBERON:0009034!4.92e-08!6;UBERON:0002095!4.92e-08!6;UBERON:0004782!4.92e-08!6;UBERON:0003281!4.92e-08!6;UBERON:0009664!4.92e-08!6;UBERON:0002296!4.92e-08!6;UBERON:0005602!4.92e-08!6;UBERON:0001179!4.92e-08!6;UBERON:0006293!4.92e-08!6;UBERON:0003887!5.07e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.14e-21,6;UBERON:0004457,3.14e-21,6;UBERON:0000042,3.14e-21,6;UBERON:0004854,3.14e-21,6;UBERON:0009034,3.14e-21,6;UBERON:0002095,3.14e-21,6;UBERON:0004782,3.14e-21,6;UBERON:0003281,3.14e-21,6;UBERON:0009664,3.14e-21,6;UBERON:0002296,3.14e-21,6;UBERON:0005602,3.14e-21,6;UBERON:0001179,3.14e-21,6;UBERON:0006293,3.14e-21,6;UBERON:0002193,5.82e-13,48;UBERON:0002405,5.82e-13,48;UBERON:0003887,6.72e-13,10;UBERON:0002390,6.31e-11,45;UBERON:0003061,6.31e-11,45;UBERON:0002075,2.40e-10,19;UBERON:0000029,2.09e-09,1;UBERON:0001097,2.09e-09,1;UBERON:0003968,2.09e-09,1;UBERON:0001467,2.09e-09,1;UBERON:0002371,1.59e-08,16;UBERON:0000945,3.55e-08,16;UBERON:0010039,3.55e-08,16 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.82227740650843,0.699561878128147,12.7762176970086,10.8320402548534,9.33657233955666,0,0,0,0.159992422793407,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.21465206048266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88406825470758,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0.318909537314974,0.655453258862952,0.345369963731791,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36696704638282,0,0,1.50694765603753,2.7338845544205,2.74533807847827,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Ms4a1 | |||
}} |
Revision as of 17:02, 13 September 2013
Short description: | p3@Ms4a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ms4a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 36bp_to_ENSMUST00000169159, NM_007641, uc008grw.1, uc008grx.1_5end |
EntrezGene: | Ms4a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.47e-22 | 6 |
megakaryocyte | 3.47e-22 | 6 |
megakaryocyte-erythroid progenitor cell | 6.35e-15 | 9 |
myeloid lineage restricted progenitor cell | 1.98e-10 | 13 |
lymphocyte of B lineage | 1.73e-09 | 1 |
B cell | 1.73e-09 | 1 |
pro-B cell | 1.73e-09 | 1 |
myeloid cell | 1.59e-08 | 16 |
hematopoietic lineage restricted progenitor cell | 2.97e-08 | 25 |
common myeloid progenitor | 3.24e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.14e-21 | 6 |
cavity lining | 3.14e-21 | 6 |
serous membrane | 3.14e-21 | 6 |
gastrointestinal system mesentery | 3.14e-21 | 6 |
stomach region | 3.14e-21 | 6 |
mesentery | 3.14e-21 | 6 |
gastrointestinal system serosa | 3.14e-21 | 6 |
mesentery of stomach | 3.14e-21 | 6 |
gut mesentery | 3.14e-21 | 6 |
dorsal mesentery | 3.14e-21 | 6 |
dorsal mesogastrium | 3.14e-21 | 6 |
peritoneal cavity | 3.14e-21 | 6 |
spleen primordium | 3.14e-21 | 6 |
hemolymphoid system | 5.82e-13 | 48 |
immune system | 5.82e-13 | 48 |
intraembryonic coelom | 6.72e-13 | 10 |
hematopoietic system | 6.31e-11 | 45 |
blood island | 6.31e-11 | 45 |
viscus | 2.40e-10 | 19 |
lymph node | 2.09e-09 | 1 |
axillary lymph node | 2.09e-09 | 1 |
peripheral lymph node | 2.09e-09 | 1 |
shoulder | 2.09e-09 | 1 |
bone marrow | 1.59e-08 | 16 |
stomach | 3.55e-08 | 16 |
food storage organ | 3.55e-08 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.