FFCP PHASE1:Hg19::chr6:13328364..13328407,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51256|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21066|TSSclassifier=S|UniProt=Q5SZM2,Q5SZM1|association_with_transcript=-2bp_to_ENST00000416436,ENST00000428109_5end|description=CAGE_peak_3_at_TBC1D7_5end|id=chr6:13328364..13328407,-|ontology_enrichment_celltype=CL:0000860!3.79e-24!45;CL:0002057!5.52e-22!42;CL:0000766!1.49e-15!76;CL:0002194!3.27e-14!63;CL:0000576!3.27e-14!63;CL:0000040!3.27e-14!63;CL:0000559!3.27e-14!63;CL:0002009!2.49e-13!65;CL:0000839!3.55e-12!70;CL:0000557!8.35e-12!71;CL:0000763!5.81e-11!112;CL:0000049!5.81e-11!112;CL:0000738!1.19e-08!140;CL:0000037!4.21e-08!172;CL:0000566!4.21e-08!172;CL:0002087!1.06e-07!119;CL:0002032!2.23e-07!165;CL:0000837!2.23e-07!165;CL:0000988!6.57e-07!182|ontology_enrichment_celltype_v019=CL:0000860;1.33e-47;33!CL:0002057;1.33e-47;33!CL:0000473;1.16e-31;39!CL:0000234;1.16e-31;39!CL:0000576;1.12e-22;48!CL:0000766;9.55e-17;69!CL:0000148;3.11e-14;10!CL:0002567;5.12e-13;3!CL:0000147;5.92e-10;14!CL:0000771;1.17e-08;2!CL:0000763;2.68e-07;100!CL:0000710;9.60e-07;20|ontology_enrichment_celltype_v019_2=CL:0000860,6.19e-47,42;CL:0002057,6.19e-47,42;CL:0000473,2.75e-40,48;CL:0000234,2.75e-40,48;CL:0000766,1.40e-31,72;CL:0002194,5.50e-31,59;CL:0000576,5.50e-31,59;CL:0000040,5.50e-31,59;CL:0000559,5.50e-31,59;CL:0002009,8.70e-30,61;CL:0000839,4.19e-27,66;CL:0000557,1.29e-26,67;CL:0000763,6.70e-19,108;CL:0000049,6.70e-19,108;CL:0000148,3.01e-14,10;CL:0000541,3.01e-14,10;CL:0000738,1.10e-13,136;CL:0002087,4.02e-13,115;CL:0002567,4.65e-13,3;CL:0002031,2.43e-12,120;CL:0002032,1.40e-10,161;CL:0000837,1.40e-10,161;CL:0000147,5.79e-10,14;CL:0000037,7.01e-10,168;CL:0000988,4.58e-09,177;CL:0000771,1.09e-08,2;CL:0000710,9.46e-07,20|ontology_enrichment_development_v019=CL:0002057;1.25e-33;42|ontology_enrichment_disease=DOID:0050687!6.68e-15!143;DOID:305!4.19e-14!106;DOID:162!1.09e-12!235;DOID:14566!3.62e-12!239|ontology_enrichment_disease_v019=DOID:1909;2.65e-09;2|ontology_enrichment_disease_v019_2=DOID:1909,2.36e-09,2|ontology_enrichment_uberon=UBERON:0001474!2.68e-11!86;UBERON:0002371!3.35e-10!80;UBERON:0004765!1.24e-09!101;UBERON:0001434!1.24e-09!101;UBERON:0001950!2.20e-07!20;UBERON:0002390!3.14e-07!102;UBERON:0003061!3.14e-07!102;UBERON:0002020!3.30e-07!34;UBERON:0003528!3.30e-07!34;UBERON:0002619!4.59e-07!22;UBERON:0001869!4.80e-07!32;UBERON:0002405!8.74e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.67e-23,76;UBERON:0001474,1.23e-22,82;UBERON:0004765,4.32e-20,90;UBERON:0002405,1.42e-17,93;UBERON:0001434,1.75e-17,100;UBERON:0002390,2.19e-16,98;UBERON:0003061,2.19e-16,98;UBERON:0002193,2.43e-14,108;UBERON:0002204,3.85e-08,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0.314843125254717,1.18009283054671,0.767658796194425,0.464448369948228,0,0,1.47901604066715,0,0,0.293600439334847,2.76997704265939,1.20326668482085,0.217010870715852,0,0,0,0.290796477559129,1.51150377475524,0.242584061187816,2.09186133215116,6.57868620834921,5.26500830521676,0.863077176966451,2.56160706529101,3.07426898855161,2.06847408441971,5.80936215225443,4.06279459783025,2.63539275359647,7.36846605156184,7.19115150224271,3.36692281607993,6.41858054152187,5.11469700639233,0.329851300186716,0.598390972864896,0.426224750532694,0.870627715885752,3.97169657283798,4.35975574296902,1.00499466102697,3.12889751052121,3.04064382587163,0.605399502633369,2.94622108790052,3.16462387440884,0.211255286311942,0,0,0.44931452458598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.504867548488229,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.441175890929576,0,0.237270619111097,0.674156540800822,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,1.58040879591855,1.71697232418975,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0.383382679165211,0,0,0.414656231081544,0,0,8.44521994085848,6.49380323449072,5.86087236050235,6.84289784090821,4.21592720083626,0.901029173531752,5.43070221998099,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0,0.431255149719035,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51256 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21066 | |||
|TSSclassifier=S | |||
|UniProt=Q5SZM2,Q5SZM1 | |||
|association_with_transcript=-2bp_to_ENST00000416436,ENST00000428109_5end | |||
|description=CAGE_peak_3_at_TBC1D7_5end | |||
|id=chr6:13328364..13328407,- | |||
|ontology_enrichment_celltype=CL:0000860!3.79e-24!45;CL:0002057!5.52e-22!42;CL:0000766!1.49e-15!76;CL:0002194!3.27e-14!63;CL:0000576!3.27e-14!63;CL:0000040!3.27e-14!63;CL:0000559!3.27e-14!63;CL:0002009!2.49e-13!65;CL:0000839!3.55e-12!70;CL:0000557!8.35e-12!71;CL:0000763!5.81e-11!112;CL:0000049!5.81e-11!112;CL:0000738!1.19e-08!140;CL:0000037!4.21e-08!172;CL:0000566!4.21e-08!172;CL:0002087!1.06e-07!119;CL:0002032!2.23e-07!165;CL:0000837!2.23e-07!165;CL:0000988!6.57e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.33e-47;33!CL:0002057;1.33e-47;33!CL:0000473;1.16e-31;39!CL:0000234;1.16e-31;39!CL:0000576;1.12e-22;48!CL:0000766;9.55e-17;69!CL:0000148;3.11e-14;10!CL:0002567;5.12e-13;3!CL:0000147;5.92e-10;14!CL:0000771;1.17e-08;2!CL:0000763;2.68e-07;100!CL:0000710;9.60e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.19e-47,42;CL:0002057,6.19e-47,42;CL:0000473,2.75e-40,48;CL:0000234,2.75e-40,48;CL:0000766,1.40e-31,72;CL:0002194,5.50e-31,59;CL:0000576,5.50e-31,59;CL:0000040,5.50e-31,59;CL:0000559,5.50e-31,59;CL:0002009,8.70e-30,61;CL:0000839,4.19e-27,66;CL:0000557,1.29e-26,67;CL:0000763,6.70e-19,108;CL:0000049,6.70e-19,108;CL:0000148,3.01e-14,10;CL:0000541,3.01e-14,10;CL:0000738,1.10e-13,136;CL:0002087,4.02e-13,115;CL:0002567,4.65e-13,3;CL:0002031,2.43e-12,120;CL:0002032,1.40e-10,161;CL:0000837,1.40e-10,161;CL:0000147,5.79e-10,14;CL:0000037,7.01e-10,168;CL:0000988,4.58e-09,177;CL:0000771,1.09e-08,2;CL:0000710,9.46e-07,20 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-33;42 | |||
|ontology_enrichment_disease=DOID:0050687!6.68e-15!143;DOID:305!4.19e-14!106;DOID:162!1.09e-12!235;DOID:14566!3.62e-12!239 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.65e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.36e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001474!2.68e-11!86;UBERON:0002371!3.35e-10!80;UBERON:0004765!1.24e-09!101;UBERON:0001434!1.24e-09!101;UBERON:0001950!2.20e-07!20;UBERON:0002390!3.14e-07!102;UBERON:0003061!3.14e-07!102;UBERON:0002020!3.30e-07!34;UBERON:0003528!3.30e-07!34;UBERON:0002619!4.59e-07!22;UBERON:0001869!4.80e-07!32;UBERON:0002405!8.74e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.67e-23,76;UBERON:0001474,1.23e-22,82;UBERON:0004765,4.32e-20,90;UBERON:0002405,1.42e-17,93;UBERON:0001434,1.75e-17,100;UBERON:0002390,2.19e-16,98;UBERON:0003061,2.19e-16,98;UBERON:0002193,2.43e-14,108;UBERON:0002204,3.85e-08,167 | |||
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| |||
|short_description=p3@TBC1D7 | |||
}} |
Revision as of 18:03, 13 September 2013
Short description: | p3@TBC1D7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TBC1D7_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000416436, ENST00000428109_5end |
EntrezGene: | TBC1D7 |
HGNC: | 21066 |
UniProt: | Q5SZM2Q5SZM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.19e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.19e-47 | 42 |
defensive cell | 2.75e-40 | 48 |
phagocyte | 2.75e-40 | 48 |
myeloid leukocyte | 1.40e-31 | 72 |
monopoietic cell | 5.50e-31 | 59 |
monocyte | 5.50e-31 | 59 |
monoblast | 5.50e-31 | 59 |
promonocyte | 5.50e-31 | 59 |
macrophage dendritic cell progenitor | 8.70e-30 | 61 |
myeloid lineage restricted progenitor cell | 4.19e-27 | 66 |
granulocyte monocyte progenitor cell | 1.29e-26 | 67 |
myeloid cell | 6.70e-19 | 108 |
common myeloid progenitor | 6.70e-19 | 108 |
melanocyte | 3.01e-14 | 10 |
melanoblast | 3.01e-14 | 10 |
leukocyte | 1.10e-13 | 136 |
nongranular leukocyte | 4.02e-13 | 115 |
light melanocyte | 4.65e-13 | 3 |
hematopoietic lineage restricted progenitor cell | 2.43e-12 | 120 |
hematopoietic oligopotent progenitor cell | 1.40e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-10 | 161 |
pigment cell | 5.79e-10 | 14 |
hematopoietic stem cell | 7.01e-10 | 168 |
hematopoietic cell | 4.58e-09 | 177 |
eosinophil | 1.09e-08 | 2 |
neurecto-epithelial cell | 9.46e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.67e-23 | 76 |
bone element | 1.23e-22 | 82 |
skeletal element | 4.32e-20 | 90 |
immune system | 1.42e-17 | 93 |
skeletal system | 1.75e-17 | 100 |
hematopoietic system | 2.19e-16 | 98 |
blood island | 2.19e-16 | 98 |
hemolymphoid system | 2.43e-14 | 108 |
musculoskeletal system | 3.85e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.36e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.