FFCP PHASE1:Hg19::chr6:154831660..154831728,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=154043|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23034|TSSclassifier=S|UniProt=E9PDQ0,Q6P9H4|association_with_transcript=24bp_to_ENST00000367209,NM_173515,uc003qpy.2_5end|description=CAGE_peak_2_at_CNKSR3_5end|id=chr6:154831660..154831728,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!2.63e-17!365;UBERON:0007023!1.03e-14!115;UBERON:0000481!1.28e-14!347;UBERON:0000468!7.41e-13!659;UBERON:0000062!1.10e-12!511;UBERON:0004111!3.02e-12!241;UBERON:0000477!4.69e-12!286;UBERON:0000467!1.64e-09!625;UBERON:0000480!2.95e-09!626;UBERON:0005177!3.81e-09!107;UBERON:0000064!1.90e-08!219;UBERON:0000033!3.12e-08!123;UBERON:0001007!4.75e-08!155;UBERON:0001555!4.75e-08!155;UBERON:0007026!4.75e-08!155;UBERON:0005172!6.83e-08!55;UBERON:0005173!6.83e-08!55;UBERON:0004119!8.00e-08!169;UBERON:0000925!8.00e-08!169;UBERON:0006595!8.00e-08!169;UBERON:0000153!9.08e-08!129;UBERON:0007811!9.08e-08!129;UBERON:0000119!1.65e-07!312;UBERON:0002417!1.88e-07!61;UBERON:0000916!1.88e-07!61;UBERON:0004121!1.95e-07!169;UBERON:0000483!2.83e-07!309;UBERON:0000924!3.41e-07!173;UBERON:0006601!3.41e-07!173;UBERON:0003104!5.67e-07!238;UBERON:0009142!5.67e-07!238;UBERON:0002100!6.40e-07!216;UBERON:0001049!9.76e-07!57;UBERON:0005068!9.76e-07!57;UBERON:0006241!9.76e-07!57;UBERON:0007135!9.76e-07!57|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.20e-15,114;UBERON:0004111,5.27e-11,240;UBERON:0011216,1.29e-10,223;UBERON:0005172,1.16e-07,54;UBERON:0005173,1.16e-07,54;UBERON:0004121,3.07e-07,171;UBERON:0000924,3.07e-07,171;UBERON:0006601,3.07e-07,171;UBERON:0002417,3.11e-07,60;UBERON:0000916,3.11e-07,60;UBERON:0005177,3.20e-07,101;UBERON:0010314,7.31e-07,132;UBERON:0001049,7.69e-07,56;UBERON:0005068,7.69e-07,56;UBERON:0006241,7.69e-07,56;UBERON:0007135,7.69e-07,56|phase1_expression=2.36181893051724,3.8538094300377,2.39622486963151,4.00293193412522,3.12872766099101,5.23403114460221,0,1.26343974685366,3.65659879479774,1.47440361900905,2.09340350391728,5.02415155899396,2.11013582582763,6.06455129504228,6.2965501388304,0.672325146451775,1.20538905604795,0,2.92759679274304,3.44738962615006,5.50801866359483,3.44800193625897,3.72106783270374,3.14811177667634,4.3939923858181,0,0.0821005894499457,0.157421562627358,0,0,0,1.83884244895785,1.204823675113,2.58827807116751,0,0,2.64240395401362,1.10799081706375,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36305137788922,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,2.30152611318355,2.53007406669196,4.01070328508712,5.5041677205113,0,0.486634870302636,4.15953195521899,3.1042115644759,2.89854792787316,8.64461898284903,3.27865759463288,2.22470665670658,0.97364218096405,1.21890816109487,0.664789802594326,0,0.571994910780128,0,2.18638648103376,3.4409383804245,3.12426451446835,2.26123176769604,2.51699661725944,1.92582629358047,1.67195973229448,2.58416759169329,6.40379272836078,4.68608857870538,2.81980521976403,2.28081631715554,8.7862340717341,2.20597848207521,0.81014194788176,2.67899184852239,2.91888184414021,2.70267553159973,4.5994991239765,1.89853131913626,1.64881569537367,0,0,0.872188104285069,1.98788780678127,3.29239330327907,4.237093786023,4.58938593198102,3.19201543978521,4.48542080113846,0,2.4666754841716,3.11211035399766,2.69421344139376,1.79808093424805,6.35701196108712,2.30470369792,5.15507150034353,3.43376084513353,0,3.43731965269142,3.87533845524424,3.23745888736263,3.08991774744947,6.32877930890169,4.54486974053541,5.6829179646671,8.31602000097437,4.94533858557114,3.64064544775211,3.59309070908119,2.86171393721913,3.75355559615892,2.21651292387346,5.70670907145089,4.59731693698529,6.30999847407706,1.58805056424029,5.202299434977,3.84403299873421,1.27159140695737,4.50136644126603,3.29768093563004,8.50213782150576,3.53622027030021,3.71307930930786,2.43592512902997,7.57301322732343,3.12969655383818,6.46584227275248,7.10019185033229,3.32481924151213,3.73033303083073,0.966304265816484,2.72746120590835,1.43402297694502,1.21973706129595,1.85541675650079,1.85910308591229,2.798848485415,1.00928340350251,2.55484151353081,3.12899064659632,2.57296375277154,2.76269842704961,7.89425477654364,2.88751792667834,1.53798840051797,1.34867752062481,0.482022059766964,1.65440959098591,2.17879444092406,1.89816495288877,0.269662616320329,0.196221465125346,0.38474715694639,3.69077727312324,2.80483547606892,6.173610169971,5.88034845542168,21.5483559197112,1.96565443335525,14.1789577603537,0,2.7057456479485,1.20097467208968,1.86575485194663,2.24803506515239,0.804231779293047,1.29623823221941,3.58389135841357,0,2.88662684050547,3.014190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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=154043 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23034 | |||
|TSSclassifier=S | |||
|UniProt=E9PDQ0,Q6P9H4 | |||
|association_with_transcript=24bp_to_ENST00000367209,NM_173515,uc003qpy.2_5end | |||
|description=CAGE_peak_2_at_CNKSR3_5end | |||
|id=chr6:154831660..154831728,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.63e-17!365;UBERON:0007023!1.03e-14!115;UBERON:0000481!1.28e-14!347;UBERON:0000468!7.41e-13!659;UBERON:0000062!1.10e-12!511;UBERON:0004111!3.02e-12!241;UBERON:0000477!4.69e-12!286;UBERON:0000467!1.64e-09!625;UBERON:0000480!2.95e-09!626;UBERON:0005177!3.81e-09!107;UBERON:0000064!1.90e-08!219;UBERON:0000033!3.12e-08!123;UBERON:0001007!4.75e-08!155;UBERON:0001555!4.75e-08!155;UBERON:0007026!4.75e-08!155;UBERON:0005172!6.83e-08!55;UBERON:0005173!6.83e-08!55;UBERON:0004119!8.00e-08!169;UBERON:0000925!8.00e-08!169;UBERON:0006595!8.00e-08!169;UBERON:0000153!9.08e-08!129;UBERON:0007811!9.08e-08!129;UBERON:0000119!1.65e-07!312;UBERON:0002417!1.88e-07!61;UBERON:0000916!1.88e-07!61;UBERON:0004121!1.95e-07!169;UBERON:0000483!2.83e-07!309;UBERON:0000924!3.41e-07!173;UBERON:0006601!3.41e-07!173;UBERON:0003104!5.67e-07!238;UBERON:0009142!5.67e-07!238;UBERON:0002100!6.40e-07!216;UBERON:0001049!9.76e-07!57;UBERON:0005068!9.76e-07!57;UBERON:0006241!9.76e-07!57;UBERON:0007135!9.76e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.20e-15,114;UBERON:0004111,5.27e-11,240;UBERON:0011216,1.29e-10,223;UBERON:0005172,1.16e-07,54;UBERON:0005173,1.16e-07,54;UBERON:0004121,3.07e-07,171;UBERON:0000924,3.07e-07,171;UBERON:0006601,3.07e-07,171;UBERON:0002417,3.11e-07,60;UBERON:0000916,3.11e-07,60;UBERON:0005177,3.20e-07,101;UBERON:0010314,7.31e-07,132;UBERON:0001049,7.69e-07,56;UBERON:0005068,7.69e-07,56;UBERON:0006241,7.69e-07,56;UBERON:0007135,7.69e-07,56 | |||
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| |||
|short_description=p2@CNKSR3 | |||
}} |
Revision as of 18:53, 13 September 2013
Short description: | p2@CNKSR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CNKSR3_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000367209, NM_173515, uc003qpy.2_5end |
EntrezGene: | CNKSR3 |
HGNC: | 23034 |
UniProt: | E9PDQ0Q6P9H4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.20e-15 | 114 |
anatomical conduit | 5.27e-11 | 240 |
organ system subdivision | 1.29e-10 | 223 |
abdomen element | 1.16e-07 | 54 |
abdominal segment element | 1.16e-07 | 54 |
ectoderm-derived structure | 3.07e-07 | 171 |
ectoderm | 3.07e-07 | 171 |
presumptive ectoderm | 3.07e-07 | 171 |
abdominal segment of trunk | 3.11e-07 | 60 |
abdomen | 3.11e-07 | 60 |
trunk region element | 3.20e-07 | 101 |
structure with developmental contribution from neural crest | 7.31e-07 | 132 |
neural tube | 7.69e-07 | 56 |
neural rod | 7.69e-07 | 56 |
future spinal cord | 7.69e-07 | 56 |
neural keel | 7.69e-07 | 56 |
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