FFCP PHASE1:Hg19::chr6:26402565..26402568,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11119|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1138|TSSclassifier=S|UniProt=|association_with_transcript=29bp_to_ENST00000082468_5end|description=CAGE_peak_4_at_BTN3A1_5end|id=chr6:26402565..26402568,+|ontology_enrichment_celltype=CL:0000766!1.72e-08!76;CL:0000839!5.20e-08!70;CL:0000557!1.05e-07!71;CL:0002194!1.75e-07!63;CL:0000576!1.75e-07!63;CL:0000040!1.75e-07!63;CL:0000559!1.75e-07!63;CL:0002393!5.37e-07!9;CL:0002397!5.37e-07!9;CL:0002057!5.54e-07!42;CL:0002009!7.00e-07!65|ontology_enrichment_celltype_v019=CL:0002393;2.55e-22;6!CL:0002397;2.55e-22;6!CL:0000576;1.16e-12;48!CL:0002619;2.33e-12;3!CL:0000766;9.38e-07;69|ontology_enrichment_celltype_v019_2=CL:0002393,1.03e-22,9;CL:0002397,1.03e-22,9;CL:0000766,2.23e-14,72;CL:0002619,2.27e-12,3;CL:0002194,3.34e-12,59;CL:0000576,3.34e-12,59;CL:0000040,3.34e-12,59;CL:0000559,3.34e-12,59;CL:0002009,9.28e-12,61;CL:0000860,1.81e-11,42;CL:0002057,1.81e-11,42;CL:0000839,9.13e-11,66;CL:0000557,1.38e-10,67;CL:0000473,6.58e-10,48;CL:0000234,6.58e-10,48;CL:0000738,2.08e-09,136;CL:0000763,5.84e-09,108;CL:0000049,5.84e-09,108;CL:0002087,3.44e-08,115;CL:0000037,3.65e-07,168|ontology_enrichment_development_v019=CL:0002057;4.06e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!8.20e-10!102;UBERON:0003061!8.20e-10!102;UBERON:0002193!2.45e-08!112;UBERON:0002371!3.90e-07!80;UBERON:0001474!6.82e-07!86|ontology_enrichment_uberon_v019=UBERON:0000178;3.66e-09;15!UBERON:0000179;3.66e-09;15!UBERON:0000463;3.66e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.75e-14,98;UBERON:0003061,6.75e-14,98;UBERON:0002193,2.13e-12,108;UBERON:0002371,3.63e-09,76;UBERON:0000178,4.59e-09,15;UBERON:0000179,4.59e-09,15;UBERON:0000463,4.59e-09,15;UBERON:0001474,2.16e-08,82;UBERON:0004765,1.61e-07,90;UBERON:0002405,3.13e-07,93|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0,0,0,0.619264493264304,0,0,0,0.0774672005803016,0,0.880801318004542,1.10799081706375,0.200544447470142,0.434021741431704,1.34349284543955,0.647787332037959,3.60605794687861,0,0.377875943688809,0.242584061187816,0,0.822335776043652,0.309706370895104,0.863077176966451,0.256160706529101,0.236482229888585,0,0,0,0.564727018627814,0,0,0,0.320929027076094,0,0.989553900560148,0,0,0.580418477257168,0,0,0,1.0429658368404,0.217188844705117,1.81619850790011,0,0.316462387440884,1.47878700418359,1.4882300997553,1.25795187305026,1.12328631146495,0.901061357049038,0.964353520182481,1.14005097496499,0.79566670879636,0.182664153764634,0,0,0,0,0.800791974072025,0,1.32208974556972,0.954053754535364,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0.557052284425868,0,0.221533894583621,0.541607727530031,0.128091319725675,0,0.164437904603676,0.552700035571697,0,0.296573126324121,0,0,0.113309342697566,0.766440987203842,0.34362744548263,0.759059076058509,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0.649094787309367,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,2.63560834872127,0,0,0,0.25326102332916,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0.640672166455702,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0,0,0.194874010322397,0,0.184099797284599,0,0,0.201504196455281,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0,1.56449532329816,0.643240938192885,0,0.928735856063958,0,0.354920400119532,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.404493924480493,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0.231860809950154,0,0.288732895522148,0,0,0,0,0.492434012174795,0.468008530278475,0.743155811443641,0,0,0.141775097242386,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0.144119953416961,0.25248486685276,0,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0.517086863031111,0,0,0.797814349754612,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0.394061520403854,0,0.256686072559497,0.254094624222463,0,0,0,0.637938751653163,0,0,2.07207756718018,0.36807447515742,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,1.55776328755086,0.348631135379878,0,0,0,0.229628896329213,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1138 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENST00000082468_5end | |||
|description=CAGE_peak_4_at_BTN3A1_5end | |||
|id=chr6:26402565..26402568,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.72e-08!76;CL:0000839!5.20e-08!70;CL:0000557!1.05e-07!71;CL:0002194!1.75e-07!63;CL:0000576!1.75e-07!63;CL:0000040!1.75e-07!63;CL:0000559!1.75e-07!63;CL:0002393!5.37e-07!9;CL:0002397!5.37e-07!9;CL:0002057!5.54e-07!42;CL:0002009!7.00e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0002393;2.55e-22;6!CL:0002397;2.55e-22;6!CL:0000576;1.16e-12;48!CL:0002619;2.33e-12;3!CL:0000766;9.38e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.03e-22,9;CL:0002397,1.03e-22,9;CL:0000766,2.23e-14,72;CL:0002619,2.27e-12,3;CL:0002194,3.34e-12,59;CL:0000576,3.34e-12,59;CL:0000040,3.34e-12,59;CL:0000559,3.34e-12,59;CL:0002009,9.28e-12,61;CL:0000860,1.81e-11,42;CL:0002057,1.81e-11,42;CL:0000839,9.13e-11,66;CL:0000557,1.38e-10,67;CL:0000473,6.58e-10,48;CL:0000234,6.58e-10,48;CL:0000738,2.08e-09,136;CL:0000763,5.84e-09,108;CL:0000049,5.84e-09,108;CL:0002087,3.44e-08,115;CL:0000037,3.65e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;4.06e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.20e-10!102;UBERON:0003061!8.20e-10!102;UBERON:0002193!2.45e-08!112;UBERON:0002371!3.90e-07!80;UBERON:0001474!6.82e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.66e-09;15!UBERON:0000179;3.66e-09;15!UBERON:0000463;3.66e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.75e-14,98;UBERON:0003061,6.75e-14,98;UBERON:0002193,2.13e-12,108;UBERON:0002371,3.63e-09,76;UBERON:0000178,4.59e-09,15;UBERON:0000179,4.59e-09,15;UBERON:0000463,4.59e-09,15;UBERON:0001474,2.16e-08,82;UBERON:0004765,1.61e-07,90;UBERON:0002405,3.13e-07,93 | |||
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| |||
|short_description=p4@BTN3A1 | |||
}} |
Revision as of 19:47, 13 September 2013
Short description: | p4@BTN3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_BTN3A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000082468_5end |
EntrezGene: | BTN3A1 |
HGNC: | 1138 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.03e-22 | 9 |
CD14-positive, CD16-positive monocyte | 1.03e-22 | 9 |
myeloid leukocyte | 2.23e-14 | 72 |
adult endothelial progenitor cell | 2.27e-12 | 3 |
monopoietic cell | 3.34e-12 | 59 |
monocyte | 3.34e-12 | 59 |
monoblast | 3.34e-12 | 59 |
promonocyte | 3.34e-12 | 59 |
macrophage dendritic cell progenitor | 9.28e-12 | 61 |
classical monocyte | 1.81e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.81e-11 | 42 |
myeloid lineage restricted progenitor cell | 9.13e-11 | 66 |
granulocyte monocyte progenitor cell | 1.38e-10 | 67 |
defensive cell | 6.58e-10 | 48 |
phagocyte | 6.58e-10 | 48 |
leukocyte | 2.08e-09 | 136 |
myeloid cell | 5.84e-09 | 108 |
common myeloid progenitor | 5.84e-09 | 108 |
nongranular leukocyte | 3.44e-08 | 115 |
hematopoietic stem cell | 3.65e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.75e-14 | 98 |
blood island | 6.75e-14 | 98 |
hemolymphoid system | 2.13e-12 | 108 |
bone marrow | 3.63e-09 | 76 |
blood | 4.59e-09 | 15 |
haemolymphatic fluid | 4.59e-09 | 15 |
organism substance | 4.59e-09 | 15 |
bone element | 2.16e-08 | 82 |
skeletal element | 1.61e-07 | 90 |
immune system | 3.13e-07 | 93 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.