FFCP PHASE1:Hg19::chr6:31239114..31239134,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3107|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=4933|TSSclassifier=S|UniProt=Q14838|association_with_transcript=-132bp_to_M12679_5end|coexpression_cluster_id=C4591|description=CAGE_peak_6_at_HLA-C_5end|id=chr6:31239114..31239134,-|ontology_enrichment_celltype=CL:0002057!1.32e-22!42;CL:0000766!1.71e-19!76;CL:0000860!1.87e-19!45;CL:0002009!4.24e-19!65;CL:0000738!9.09e-19!140;CL:0002194!1.28e-18!63;CL:0000576!1.28e-18!63;CL:0000040!1.28e-18!63;CL:0000559!1.28e-18!63;CL:0002087!8.96e-17!119;CL:0000557!1.85e-16!71;CL:0000839!6.97e-16!70;CL:0002031!1.80e-15!124;CL:0002032!9.91e-11!165;CL:0000837!9.91e-11!165;CL:0000037!1.38e-10!172;CL:0000566!1.38e-10!172;CL:0000763!8.36e-10!112;CL:0000049!8.36e-10!112;CL:0000988!4.95e-09!182|ontology_enrichment_celltype_v019=CL:0000860;1.08e-26;33!CL:0002057;1.08e-26;33!CL:0000576;1.29e-21;48!CL:0000473;1.46e-21;39!CL:0000234;1.46e-21;39!CL:0000766;4.57e-16;69!CL:0002087;3.27e-09;104!CL:0000791;7.76e-07;18!CL:0000789;7.76e-07;18!CL:0002419;7.76e-07;18!CL:0000763;9.57e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,3.42e-35,42;CL:0002057,3.42e-35,42;CL:0000473,6.92e-35,48;CL:0000234,6.92e-35,48;CL:0000766,8.22e-29,72;CL:0002194,1.34e-26,59;CL:0000576,1.34e-26,59;CL:0000040,1.34e-26,59;CL:0000559,1.34e-26,59;CL:0002009,2.61e-25,61;CL:0000738,4.63e-25,136;CL:0002087,8.23e-24,115;CL:0000839,1.94e-22,66;CL:0000557,6.45e-22,67;CL:0002031,5.06e-21,120;CL:0002032,2.59e-17,161;CL:0000837,2.59e-17,161;CL:0000037,1.25e-16,168;CL:0000763,2.15e-15,108;CL:0000049,2.15e-15,108;CL:0000988,7.43e-15,177;CL:0002393,3.64e-07,9;CL:0002397,3.64e-07,9;CL:0000094,6.86e-07,8;CL:0000791,7.70e-07,18;CL:0000789,7.70e-07,18;CL:0002420,7.70e-07,18;CL:0002419,7.70e-07,18;CL:0000790,7.70e-07,18;CL:0000624,9.14e-07,6|ontology_enrichment_development_v019=CL:0002057;9.51e-26;42!CL:0000790;7.76e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.18e-11!80;UBERON:0002390!1.98e-11!102;UBERON:0003061!1.98e-11!102;UBERON:0002193!1.04e-10!112;UBERON:0001474!1.54e-10!86;UBERON:0002405!6.41e-10!115;UBERON:0003081!4.41e-08!216;UBERON:0004765!9.38e-08!101;UBERON:0001434!9.38e-08!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.26e-18,76;UBERON:0002390,3.49e-17,98;UBERON:0003061,3.49e-17,98;UBERON:0001474,1.00e-16,82;UBERON:0002193,2.72e-15,108;UBERON:0002405,2.80e-15,93;UBERON:0004765,4.57e-15,90;UBERON:0001434,3.90e-13,100;UBERON:0003081,1.63e-09,203|phase1_expression=0.54503513781167,0.642301571672949,0,0,0,0,0,0,0,0,4.18680700783456,0.218441372130172,1.05506791291381,0,0,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,0,0,0.626909442956176,0,0.410623275218653,0.251085279189606,0.916960868975415,0.492603536699674,0.865818594450472,3.14691421479123,4.60595277716655,1.85779347979291,0,0.30120591877825,0,0.0774672005803016,0,0,0.553995408531877,2.80762226458198,3.25516306073778,1.11957737119962,0.647787332037959,0,1.01778767145695,2.26725566213286,1.21292030593908,0.464858073811369,3.28934310417461,2.47765096716083,1.7261543539329,6.91633907628572,3.31075121844019,1.03423704220986,2.5819387343353,4.06279459783025,1.31769637679823,5.18521685109907,2.47195832889593,2.44867113896722,1.92557416245656,0.639337125799041,2.30895910130701,5.78444607102732,1.70489900213078,2.03146467040009,4.53908179752912,0.622822248995575,2.26123798731069,8.34372669472322,2.6062661364614,1.81619850790011,4.05105399586321,2.84816148696796,2.74631872205524,5.52771179909113,1.04829322754188,1.90958672949042,4.20495299956218,0.803627933485401,0.570025487482497,8.15558376516269,1.27864907635244,0,0,0,1.70692089026603,0.800791974072025,0,0,0,0,0,3.05818582500183,2.64342657158052,1.12101712596307,1.58030450865046,0.590129310341499,2.75107533924415,11.5136839439725,0.501559486172034,3.2592226663359,6.62826928028627,0,1.22551502573691,3.82987679717288,7.3106185212595,1.62482318259009,4.73937882984998,1.30059347559878,5.09757504271396,1.93445012450094,0.869409257205157,1.63115219478266,4.54819407752512,4.18142095219907,1.0197840842781,3.83220493601921,6.18529401868734,1.51811815211702,0.318565414324097,0,0,2.10805166708882,4.47953139040464,0,0.236777252044017,0,2.21767417547206,4.27904313253612,3.62061009706997,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.724232594804119,0,3.89307896242109,0.189069634328136,0,0.087834785693126,0.458426764241994,0.364295288292542,0.370784442784429,0.97364218096405,0.696518949197069,0.797747763113191,0.238490624305342,0,0.74291500265913,0.39752481473341,0,0,0,0,0.550236083880135,0,0.258416759169329,2.49036383880697,0,0.402829317109147,0,2.4406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0.949265659568129,0,15.8136500923276,0,0.436094052142534,0.993943903390637,0.25326102332916,0.397227542439656,0.860509862246441,0.354668382198357,2.24271040056923,0,0.74000264525148,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3107 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4933 | |||
|TSSclassifier=S | |||
|UniProt=Q14838 | |||
|association_with_transcript=-132bp_to_M12679_5end | |||
|coexpression_cluster_id=C4591 | |||
|description=CAGE_peak_6_at_HLA-C_5end | |||
|id=chr6:31239114..31239134,- | |||
|ontology_enrichment_celltype=CL:0002057!1.32e-22!42;CL:0000766!1.71e-19!76;CL:0000860!1.87e-19!45;CL:0002009!4.24e-19!65;CL:0000738!9.09e-19!140;CL:0002194!1.28e-18!63;CL:0000576!1.28e-18!63;CL:0000040!1.28e-18!63;CL:0000559!1.28e-18!63;CL:0002087!8.96e-17!119;CL:0000557!1.85e-16!71;CL:0000839!6.97e-16!70;CL:0002031!1.80e-15!124;CL:0002032!9.91e-11!165;CL:0000837!9.91e-11!165;CL:0000037!1.38e-10!172;CL:0000566!1.38e-10!172;CL:0000763!8.36e-10!112;CL:0000049!8.36e-10!112;CL:0000988!4.95e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-26;33!CL:0002057;1.08e-26;33!CL:0000576;1.29e-21;48!CL:0000473;1.46e-21;39!CL:0000234;1.46e-21;39!CL:0000766;4.57e-16;69!CL:0002087;3.27e-09;104!CL:0000791;7.76e-07;18!CL:0000789;7.76e-07;18!CL:0002419;7.76e-07;18!CL:0000763;9.57e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.42e-35,42;CL:0002057,3.42e-35,42;CL:0000473,6.92e-35,48;CL:0000234,6.92e-35,48;CL:0000766,8.22e-29,72;CL:0002194,1.34e-26,59;CL:0000576,1.34e-26,59;CL:0000040,1.34e-26,59;CL:0000559,1.34e-26,59;CL:0002009,2.61e-25,61;CL:0000738,4.63e-25,136;CL:0002087,8.23e-24,115;CL:0000839,1.94e-22,66;CL:0000557,6.45e-22,67;CL:0002031,5.06e-21,120;CL:0002032,2.59e-17,161;CL:0000837,2.59e-17,161;CL:0000037,1.25e-16,168;CL:0000763,2.15e-15,108;CL:0000049,2.15e-15,108;CL:0000988,7.43e-15,177;CL:0002393,3.64e-07,9;CL:0002397,3.64e-07,9;CL:0000094,6.86e-07,8;CL:0000791,7.70e-07,18;CL:0000789,7.70e-07,18;CL:0002420,7.70e-07,18;CL:0002419,7.70e-07,18;CL:0000790,7.70e-07,18;CL:0000624,9.14e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;9.51e-26;42!CL:0000790;7.76e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-11!80;UBERON:0002390!1.98e-11!102;UBERON:0003061!1.98e-11!102;UBERON:0002193!1.04e-10!112;UBERON:0001474!1.54e-10!86;UBERON:0002405!6.41e-10!115;UBERON:0003081!4.41e-08!216;UBERON:0004765!9.38e-08!101;UBERON:0001434!9.38e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.26e-18,76;UBERON:0002390,3.49e-17,98;UBERON:0003061,3.49e-17,98;UBERON:0001474,1.00e-16,82;UBERON:0002193,2.72e-15,108;UBERON:0002405,2.80e-15,93;UBERON:0004765,4.57e-15,90;UBERON:0001434,3.90e-13,100;UBERON:0003081,1.63e-09,203 | |||
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| |||
|short_description=p6@HLA-C | |||
}} |
Revision as of 20:08, 13 September 2013
Short description: | p6@HLA-C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_HLA-C_5end |
Coexpression cluster: | C4591_Neutrophils_Basophils_Eosinophils_migratory_CD14_CD4_CD8 |
Association with transcript: | -132bp_to_M12679_5end |
EntrezGene: | HLA-C |
HGNC: | 4933 |
UniProt: | Q14838 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.26e-18 | 76 |
hematopoietic system | 3.49e-17 | 98 |
blood island | 3.49e-17 | 98 |
bone element | 1.00e-16 | 82 |
hemolymphoid system | 2.72e-15 | 108 |
immune system | 2.80e-15 | 93 |
skeletal element | 4.57e-15 | 90 |
skeletal system | 3.90e-13 | 100 |
lateral plate mesoderm | 1.63e-09 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.