FFCP PHASE1:Hg19::chr7:100609327..100609376,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4584,57876|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13384,7513|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000480291_5end|coexpression_cluster_id=C4326|description=CAGE_peak_2_at_MUC3A_5end,CAGE_peak_2_at_MUC3B_5end|id=chr7:100609327..100609376,+|ontology_enrichment_celltype=CL:0000066!1.70e-14!254;CL:0000039!5.49e-09!7;CL:0000586!5.49e-09!7;CL:0002322!2.86e-07!5|ontology_enrichment_celltype_v019=CL:0000039;8.16e-16;7!CL:0000586;8.16e-16;7!CL:0002322;1.71e-12;5|ontology_enrichment_celltype_v019_2=CL:0000039,8.85e-16,7;CL:0000586,8.85e-16,7;CL:0000066,7.06e-13,253;CL:0002322,1.68e-12,5|ontology_enrichment_development_v019=UBERON:0009847;3.83e-07;3!UBERON:0003353;3.83e-07;3|ontology_enrichment_disease=DOID:0050687!2.33e-13!143;DOID:305!3.13e-12!106;DOID:14566!4.02e-08!239;DOID:162!1.16e-07!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,2.66e-12,106;DOID:0050687,1.63e-11,143|ontology_enrichment_uberon=UBERON:0004119!2.21e-13!169;UBERON:0000925!2.21e-13!169;UBERON:0006595!2.21e-13!169;UBERON:0004921!1.72e-12!129;UBERON:0004185!1.72e-12!129;UBERON:0000160!7.30e-12!27;UBERON:0005409!3.79e-11!35;UBERON:0001007!6.59e-11!155;UBERON:0001555!6.59e-11!155;UBERON:0007026!6.59e-11!155;UBERON:0000077!5.57e-10!130;UBERON:0002108!2.26e-08!14;UBERON:0001008!2.60e-08!45;UBERON:0001737!3.19e-08!9;UBERON:0006554!7.88e-08!44;UBERON:0003101!7.80e-07!22;UBERON:0000079!7.80e-07!22|ontology_enrichment_uberon_v019=UBERON:0005409;6.03e-16;22!UBERON:0000160;1.67e-15;17!UBERON:0000059;2.68e-09;11!UBERON:0001737;3.45e-09;9!UBERON:0001557;3.45e-09;9!UBERON:0004921;8.38e-09;33!UBERON:0000305;1.04e-07;7!UBERON:0005631;1.80e-07;10!UBERON:0000158;1.80e-07;10!UBERON:0000922;2.13e-07;49!UBERON:0002108;2.61e-07;4!UBERON:0004907;2.95e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.68e-15,17;UBERON:0005409,1.15e-13,25;UBERON:0004921,6.95e-11,118;UBERON:0004119,2.28e-10,160;UBERON:0000925,2.28e-10,160;UBERON:0006595,2.28e-10,160;UBERON:0001007,1.95e-09,145;UBERON:0001555,1.95e-09,145;UBERON:0007026,1.95e-09,145;UBERON:0000059,2.51e-09,11;UBERON:0001737,3.77e-09,9;UBERON:0006554,5.20e-08,47;UBERON:0001008,9.22e-08,48;UBERON:0000305,1.13e-07,7;UBERON:0001046,1.25e-07,19;UBERON:0004907,2.72e-07,5;UBERON:0002108,2.86e-07,4|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.491467873003018,1.39560233594486,2.40285509343189,4.74780560811216,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.229240217243854,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.339121184620975,0.57978255948989,0.545492241181669,0,21.8332933971976,14.8433340520063,17.4290914304278,14.2015645371057,17.1578178595427,8.39447925874409,0,0,0,0,0,1.41968160047813,1.85443159085912,1.20505514941741,2.09558548191549,1.52515610864684,0.949082476444386,1.34831308160164,1.56977172100277,0.38474715694639,0,0,0,0,5.07020139287323,0.982827216677626,2.36315962672562,0,10.3310288376215,0,1.42675371031213,0,1.80952150340936,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.179117045405697,0.290633938513962,1.91691339582606,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,1.09970290300263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,5.31781578203138,2.6065841139427,0.552485933615378,0,0,0,2.70719767744447,2.46449078734127,0,0,0.73886140225013,0,0,0,0,0,0,2.29388645740534,4.15538004464362,0.447749509444357,0,0,0.256450125116389,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,1.22386941009813,3.44404298136984,0,1.33029046061003,2.06751060186264,0,0,0,0,0,0,0,0,1.70918513803957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0,0,12.3512756669425,0,0,0,1.13654458722565,61.3573325775863,1.18785872333055,66.0395509513349,0,0,0,0,0,0,6.90709788827869,0,0,0.369254416383208,0,0,4.65455054156584,0,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0,1.74301541630384,0.278847488557207,0.0769502585037971,0,7.37804494041792,4.12885164284952,14.124158349861,11.1650405906172,0,0,0,0,0,1.35357396370308,1.56850027454192,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4584,57876 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13384,7513 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000480291_5end | |||
|coexpression_cluster_id=C4326 | |||
|description=CAGE_peak_2_at_MUC3A_5end,CAGE_peak_2_at_MUC3B_5end | |||
|id=chr7:100609327..100609376,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.70e-14!254;CL:0000039!5.49e-09!7;CL:0000586!5.49e-09!7;CL:0002322!2.86e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.16e-16;7!CL:0000586;8.16e-16;7!CL:0002322;1.71e-12;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.85e-16,7;CL:0000586,8.85e-16,7;CL:0000066,7.06e-13,253;CL:0002322,1.68e-12,5 | |||
|ontology_enrichment_development_v019=UBERON:0009847;3.83e-07;3!UBERON:0003353;3.83e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!2.33e-13!143;DOID:305!3.13e-12!106;DOID:14566!4.02e-08!239;DOID:162!1.16e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.66e-12,106;DOID:0050687,1.63e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.21e-13!169;UBERON:0000925!2.21e-13!169;UBERON:0006595!2.21e-13!169;UBERON:0004921!1.72e-12!129;UBERON:0004185!1.72e-12!129;UBERON:0000160!7.30e-12!27;UBERON:0005409!3.79e-11!35;UBERON:0001007!6.59e-11!155;UBERON:0001555!6.59e-11!155;UBERON:0007026!6.59e-11!155;UBERON:0000077!5.57e-10!130;UBERON:0002108!2.26e-08!14;UBERON:0001008!2.60e-08!45;UBERON:0001737!3.19e-08!9;UBERON:0006554!7.88e-08!44;UBERON:0003101!7.80e-07!22;UBERON:0000079!7.80e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;6.03e-16;22!UBERON:0000160;1.67e-15;17!UBERON:0000059;2.68e-09;11!UBERON:0001737;3.45e-09;9!UBERON:0001557;3.45e-09;9!UBERON:0004921;8.38e-09;33!UBERON:0000305;1.04e-07;7!UBERON:0005631;1.80e-07;10!UBERON:0000158;1.80e-07;10!UBERON:0000922;2.13e-07;49!UBERON:0002108;2.61e-07;4!UBERON:0004907;2.95e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.68e-15,17;UBERON:0005409,1.15e-13,25;UBERON:0004921,6.95e-11,118;UBERON:0004119,2.28e-10,160;UBERON:0000925,2.28e-10,160;UBERON:0006595,2.28e-10,160;UBERON:0001007,1.95e-09,145;UBERON:0001555,1.95e-09,145;UBERON:0007026,1.95e-09,145;UBERON:0000059,2.51e-09,11;UBERON:0001737,3.77e-09,9;UBERON:0006554,5.20e-08,47;UBERON:0001008,9.22e-08,48;UBERON:0000305,1.13e-07,7;UBERON:0001046,1.25e-07,19;UBERON:0004907,2.72e-07,5;UBERON:0002108,2.86e-07,4 | |||
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| |||
|short_description=p2@MUC3A,p2@MUC3B | |||
}} |
Revision as of 22:19, 13 September 2013
Short description: | p2@MUC3A, p2@MUC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MUC3A_5end, CAGE_peak_2_at_MUC3B_5end |
Coexpression cluster: | C4326_amniotic_H9_testicular_pancreatic_iPS_choriocarcinoma_signet |
Association with transcript: | 0bp_to_ENST00000480291_5end |
EntrezGene: | 4584,57876 |
HGNC: | 7513&submit=Submit 13384, 7513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.85e-16 | 7 |
germ cell | 8.85e-16 | 7 |
epithelial cell | 7.06e-13 | 253 |
embryonic stem cell | 1.68e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.68e-15 | 17 |
gastrointestinal system | 1.15e-13 | 25 |
subdivision of digestive tract | 6.95e-11 | 118 |
endoderm-derived structure | 2.28e-10 | 160 |
endoderm | 2.28e-10 | 160 |
presumptive endoderm | 2.28e-10 | 160 |
digestive system | 1.95e-09 | 145 |
digestive tract | 1.95e-09 | 145 |
primitive gut | 1.95e-09 | 145 |
large intestine | 2.51e-09 | 11 |
larynx | 3.77e-09 | 9 |
urinary system structure | 5.20e-08 | 47 |
renal system | 9.22e-08 | 48 |
amnion | 1.13e-07 | 7 |
hindgut | 1.25e-07 | 19 |
lower digestive tract | 2.72e-07 | 5 |
small intestine | 2.86e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.66e-12 | 106 |
cell type cancer | 1.63e-11 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.