FFCP PHASE1:Mm9::chr3:94736963..94736995,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20341|HGNC=|MCL_coexpression_id=1724|UniProt=P17563,D6RHN2|association_with_transcript=0bp_to_ENSMUST00000090839,ENSMUST00000139949,ENSMUST00000140757_5end|description=CAGE_peak_1_at_Selenbp1_5end|id=chr3:94736963..94736995,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!8.65e-18!79;UBERON:0009569!4.47e-17!66;UBERON:0005177!7.40e-16!85;UBERON:0001007!9.02e-15!128;UBERON:0001555!9.02e-15!128;UBERON:0007026!9.02e-15!128;UBERON:0004921!2.46e-14!126;UBERON:0004185!2.46e-14!126;UBERON:0004119!2.86e-14!130;UBERON:0000925!2.86e-14!130;UBERON:0006595!2.86e-14!130;UBERON:0002100!9.12e-14!98;UBERON:0009854!3.20e-11!23;UBERON:0009856!3.20e-11!23;UBERON:0005409!1.05e-10!59;UBERON:0003914!1.17e-10!47;UBERON:0002107!1.54e-10!22;UBERON:0007499!1.54e-10!22;UBERON:0006925!1.54e-10!22;UBERON:0009497!1.54e-10!22;UBERON:0000015!1.54e-10!22;UBERON:0002423!1.54e-10!22;UBERON:0006235!1.54e-10!22;UBERON:0008835!1.54e-10!22;UBERON:0003894!1.54e-10!22;UBERON:0004161!1.54e-10!22;UBERON:0008836!1.54e-10!22;UBERON:0005172!3.55e-10!49;UBERON:0005173!3.55e-10!49;UBERON:0002417!3.55e-10!49;UBERON:0000916!3.55e-10!49;UBERON:0002365!3.92e-10!25;UBERON:0002330!3.92e-10!25;UBERON:0000926!1.34e-09!193;UBERON:0004120!1.34e-09!193;UBERON:0006603!1.34e-09!193;UBERON:0000160!1.09e-08!43;UBERON:0000464!1.28e-08!57;UBERON:0005178!6.95e-08!17;UBERON:0005181!6.95e-08!17;UBERON:0002224!6.95e-08!17;UBERON:0000915!6.95e-08!17;UBERON:0008947!6.95e-08!17;UBERON:0003258!6.95e-08!17;UBERON:0003104!8.77e-08!131;UBERON:0009142!8.77e-08!131;UBERON:0001041!1.50e-07!92;UBERON:0000077!2.44e-07!97;UBERON:0002048!2.49e-07!14;UBERON:0000117!2.49e-07!14;UBERON:0000171!2.49e-07!14;UBERON:0000170!2.49e-07!14;UBERON:0005597!2.49e-07!14;UBERON:0000118!2.49e-07!14;UBERON:0005153!3.82e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.91e-19,79;UBERON:0002100,3.71e-17,90;UBERON:0009569,4.36e-17,66;UBERON:0001007,2.04e-12,116;UBERON:0001555,2.04e-12,116;UBERON:0007026,2.04e-12,116;UBERON:0004921,5.09e-12,114;UBERON:0004119,6.10e-12,118;UBERON:0000925,6.10e-12,118;UBERON:0006595,6.10e-12,118;UBERON:0009854,3.15e-11,23;UBERON:0009856,3.15e-11,23;UBERON:0003914,1.15e-10,47;UBERON:0002107,1.52e-10,22;UBERON:0007499,1.52e-10,22;UBERON:0006925,1.52e-10,22;UBERON:0009497,1.52e-10,22;UBERON:0000015,1.52e-10,22;UBERON:0002423,1.52e-10,22;UBERON:0006235,1.52e-10,22;UBERON:0008835,1.52e-10,22;UBERON:0003894,1.52e-10,22;UBERON:0004161,1.52e-10,22;UBERON:0008836,1.52e-10,22;UBERON:0005172,3.50e-10,49;UBERON:0005173,3.50e-10,49;UBERON:0002417,3.50e-10,49;UBERON:0000916,3.50e-10,49;UBERON:0002365,3.86e-10,25;UBERON:0002330,3.86e-10,25;UBERON:0005409,1.22e-08,47;UBERON:0005178,6.88e-08,17;UBERON:0005181,6.88e-08,17;UBERON:0002224,6.88e-08,17;UBERON:0000915,6.88e-08,17;UBERON:0008947,6.88e-08,17;UBERON:0003258,6.88e-08,17;UBERON:0002048,2.47e-07,14;UBERON:0000117,2.47e-07,14;UBERON:0000171,2.47e-07,14;UBERON:0000170,2.47e-07,14;UBERON:0005597,2.47e-07,14;UBERON:0000118,2.47e-07,14;UBERON:0005153,3.78e-07,17;UBERON:0003104,7.87e-07,61;UBERON:0009142,7.87e-07,61;UBERON:0000160,8.99e-07,31|phase1_expression=13.7728008510123,13.9590163055744,16.8349718574128,22.9872800593191,21.0376206577466,13.766100296775,13.5495331545405,0.129123323441576,0,0,0,0,0.171200729931206,0,14.6568295198892,14.1732687172878,19.5877325875881,2.99689057090326,1.50825876966313,2.97072756258621,57.23413427167,26.808556824239,12.7987896678078,17.4391740844813,19.9586074528438,24.1177424928308,27.1380057580217,19.6078821744159,36.6745199550802,27.2192540140725,13.082100128663,12.065582795733,10.4561013889377,0,14.1537293678125,17.6208724080002,21.2336130512864,5.4409111995798,11.720030167857,9.94695113550217,6.47054636834116,8.19654581950135,7.76816564849846,2.51793635951155,2.83855407414641,3.12029478674859,7.04152209913235,7.41285531693518,7.68901639570651,4.6663175777828,3.3596741190087,10.062679505548,0.335565212115473,0,0.336093799142464,8.48956138918625,25.7880095944881,18.5641953219879,1.21389876515759,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,13.9484456178617,12.8552627133707,14.9200824138681,5.09320187881288,9.22123932771731,0.933206510776299,0.945041568321835,1.05162480675691,3.42781181284564,3.09215957332259,2.44981598429908,1.82106394934649,0.919218786610021,2.20231761998777,3.06449611404451,3.07213066512487,1.45074916503213,1.18933936683133,3.12548022334056,4.4669279840221,5.6276261003168,7.94550888439413,2.06240009831567,2.70506193518296,2.42319279572891,0.530083353332288,2.41828992341714,20.2905142091174,98.088321975878,179.512432098846,97.6862776864449,114.36064947079,107.526452903361,34.6897717725427,0.681721290312231,3.63700406444016,3.88673531961374,5.0703631119605,0,0,0,27.0613801264018,23.5624674891842,15.6712577954583,68.510327831436,2.33044095282455,17.9614988268438,8.32729568477452,8.22056791442781,10.3776973765226,13.4143150091834,12.9347577849275,20.7349875693965,41.7759495471092,28.6306726701425,19.4614321428972,7.60304194752823,10.8212344045593,9.21262980956922,363.463934375338,3.51336956413857,4.1889341362691,21.9693067479389,12.4607729486157,13.7977628128484,14.6130761134024,6.14141621559773,4.11750542536764,2.1361239859187,4.34560800480691,3.06858548796397,4.36354893575076,3.89379031362618,15.5814226690984,15.4264643556515,9.35074206204597,14.5204880561667,2.21204753036596,4.13823787980251,3.60124259610698,4.67184935290717,4.150226448231,5.25266253167884,4.77878795254617,10.8655415710387,3.44908788692548,5.10586416453112,5.10258260075452,7.89104636739269,4.17070873838397,9.4028084960985,7.81972118350185,6.17006227137329,12.6398373716382,12.0953516343916,9.94572247884574,8.28503090142008,7.50483391939508,11.884096056427,13.9679393995274,11.4123254413494,26.2254091908543,16.9749779667798,28.4369805483596,34.9128373677837,25.8358964364164,32.833492815819,39.0751662011025,43.128996290473,36.6648692536055,51.8036776415035,5.04695876553905,1.9551876352064,23.1293148088659,10.5780226665418,5.54549451391608,6.50262681209228,13.9176858227861,21.781820659321,23.3496946037114,43.9421196320012,22.7773949541366,39.0336522695906,37.1976109024399,41.1839897125182,38.2129610753476,17.9763881730844,106.772196638099,104.150885912034,6.06937283049861,6.96915926919346,7.88954149711563,8.5533557695032,10.4734343070518,39.2059233186881,37.8154492003059,87.5328177519041,121.831012804907,153.50607191872,114.430714055639,8.67594549723689,18.2799865455279,18.2138311031732,21.3003127457928,32.0765622470714,71.0406126470161,56.9638352152605,61.4492509477384,60.678072314566,37.3797336971122,66.6132296326621,79.8816443173275,100.52639342295,120.016869646159,130.742194289473,218.19351758676,14.9698215298683,12.87423313892,14.9375675482166,34.7341567466983,73.8702595318407,120.926169570095,287.822130590253,61.3200710573083,74.1906710323396,71.9141006645267,194.17802793815,143.328534948693,260.512954505302,9.04747703635634,10.8781136763742,9.34352118736169,19.0396354950265,7.38532713943843,4.92289083687253,0,13.1284882146274,1.26203287766503,0,0.646270193198397,0.716906393857656,1.11399337041197,1.13230612315533,1.21443210502468,0.584511715822624,0.790575555893047,2.24924921495265,12.4907274983276,22.9704628730759,11.8907480328111,22.2709666012923,14.6019652173959,7.76898035695941,16.0231485191318,23.7642400492432,24.8053590019849,20.2907197642992,20.1574068671212,21.0849563096953,29.5892824059319,21.4904995396355,15.8127912862498,23.721174947083,5.44703369206061,1.98067203434441,3.36332577835162,4.92975180572662,3.90148514013002,3.0322698992352,7.24015690649332,8.52501857520878,7.50949465803873,5.93129798418696,21.8323114074412,8.244312647074,7.75029248140347,10.9769523369244,38.5572671130131,28.2322347561505,24.7758711135373,6.86073617438886,17.2579589605831,14.0343070214991,9.4449208958553,36.1667437449007,24.6049609897845,22.1914828010327,21.5872606092196,19.5932033253121,16.8603968041397,38.1868247206045,6.64305586520384,12.1991680276109,19.1169453254588,10.245326504709,10.4814030598165,21.3085667288017,23.0603141473687,27.7461298503071,580.156620454065,15.5334828271731,3.94585057078933,12.2603567756063,14.0639716888533,9.52810822885833,14.0784207590727,14.6991829176977,17.8383002741546,14.7130954873664,11.7442465756796,10.1465330746923,12.3852902690882,1.89606672376907,10.7444364103787,11.0927833738013,4.80707045017842,5.90788095702689,5.16571522431289,2.76449533895928,2.65841148914239,2.01932899896295,1.98137697303,1.81487133246313,0.877120926657772,0.481059208201647,2.22066114144981,50.7876059298073,0,0,0,13.1368923941889,15.2022805115457,17.2162526811229,10.5040505748742,11.034586288778,0.564751842617067,0.920650473014354,0.572895513439397,2.23409137046794,4.7955776383945,1.5107877947794,0.675022500231806,2.2516060161211,1.81256963593682,1.03552062350364,2.38710899443606,1.19707462020309,6.82934423016537,10.2104821168684,14.8825345465867,15.2590112013512,15.1127774905098,13.598313777767,8.98573786857083,18.9522908822848,12.4204856946217,16.2218653592026,17.510961896868,13.2532065478079,20.6767688240208,13.3362233559261,11.240779616651,12.5390993301408,6.59337441285291,13.2479028120958,11.3146853287187,8.69631450180754,6.91464950847231,9.44751708110135,8.84628175904108,8.2922315733843,10.426894453748,12.8904158604543,17.7903389138079,15.7119836064167,13.64302708428,16.6472575214702,11.4584692087513,13.0146946596211,19.6764743200764,8.99318080576605,24.7967504952133,19.3383948643468,12.6250299165437,22.0591419119515,14.3758058084661|short_description=p1@Selenbp1}} | ||
|EntrezGene=20341 | |||
|HGNC= | |||
|MCL_coexpression_id=1724 | |||
|UniProt=P17563,D6RHN2 | |||
|association_with_transcript=0bp_to_ENSMUST00000090839,ENSMUST00000139949,ENSMUST00000140757_5end | |||
|description=CAGE_peak_1_at_Selenbp1_5end | |||
|id=chr3:94736963..94736995,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!8.65e-18!79;UBERON:0009569!4.47e-17!66;UBERON:0005177!7.40e-16!85;UBERON:0001007!9.02e-15!128;UBERON:0001555!9.02e-15!128;UBERON:0007026!9.02e-15!128;UBERON:0004921!2.46e-14!126;UBERON:0004185!2.46e-14!126;UBERON:0004119!2.86e-14!130;UBERON:0000925!2.86e-14!130;UBERON:0006595!2.86e-14!130;UBERON:0002100!9.12e-14!98;UBERON:0009854!3.20e-11!23;UBERON:0009856!3.20e-11!23;UBERON:0005409!1.05e-10!59;UBERON:0003914!1.17e-10!47;UBERON:0002107!1.54e-10!22;UBERON:0007499!1.54e-10!22;UBERON:0006925!1.54e-10!22;UBERON:0009497!1.54e-10!22;UBERON:0000015!1.54e-10!22;UBERON:0002423!1.54e-10!22;UBERON:0006235!1.54e-10!22;UBERON:0008835!1.54e-10!22;UBERON:0003894!1.54e-10!22;UBERON:0004161!1.54e-10!22;UBERON:0008836!1.54e-10!22;UBERON:0005172!3.55e-10!49;UBERON:0005173!3.55e-10!49;UBERON:0002417!3.55e-10!49;UBERON:0000916!3.55e-10!49;UBERON:0002365!3.92e-10!25;UBERON:0002330!3.92e-10!25;UBERON:0000926!1.34e-09!193;UBERON:0004120!1.34e-09!193;UBERON:0006603!1.34e-09!193;UBERON:0000160!1.09e-08!43;UBERON:0000464!1.28e-08!57;UBERON:0005178!6.95e-08!17;UBERON:0005181!6.95e-08!17;UBERON:0002224!6.95e-08!17;UBERON:0000915!6.95e-08!17;UBERON:0008947!6.95e-08!17;UBERON:0003258!6.95e-08!17;UBERON:0003104!8.77e-08!131;UBERON:0009142!8.77e-08!131;UBERON:0001041!1.50e-07!92;UBERON:0000077!2.44e-07!97;UBERON:0002048!2.49e-07!14;UBERON:0000117!2.49e-07!14;UBERON:0000171!2.49e-07!14;UBERON:0000170!2.49e-07!14;UBERON:0005597!2.49e-07!14;UBERON:0000118!2.49e-07!14;UBERON:0005153!3.82e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.91e-19,79;UBERON:0002100,3.71e-17,90;UBERON:0009569,4.36e-17,66;UBERON:0001007,2.04e-12,116;UBERON:0001555,2.04e-12,116;UBERON:0007026,2.04e-12,116;UBERON:0004921,5.09e-12,114;UBERON:0004119,6.10e-12,118;UBERON:0000925,6.10e-12,118;UBERON:0006595,6.10e-12,118;UBERON:0009854,3.15e-11,23;UBERON:0009856,3.15e-11,23;UBERON:0003914,1.15e-10,47;UBERON:0002107,1.52e-10,22;UBERON:0007499,1.52e-10,22;UBERON:0006925,1.52e-10,22;UBERON:0009497,1.52e-10,22;UBERON:0000015,1.52e-10,22;UBERON:0002423,1.52e-10,22;UBERON:0006235,1.52e-10,22;UBERON:0008835,1.52e-10,22;UBERON:0003894,1.52e-10,22;UBERON:0004161,1.52e-10,22;UBERON:0008836,1.52e-10,22;UBERON:0005172,3.50e-10,49;UBERON:0005173,3.50e-10,49;UBERON:0002417,3.50e-10,49;UBERON:0000916,3.50e-10,49;UBERON:0002365,3.86e-10,25;UBERON:0002330,3.86e-10,25;UBERON:0005409,1.22e-08,47;UBERON:0005178,6.88e-08,17;UBERON:0005181,6.88e-08,17;UBERON:0002224,6.88e-08,17;UBERON:0000915,6.88e-08,17;UBERON:0008947,6.88e-08,17;UBERON:0003258,6.88e-08,17;UBERON:0002048,2.47e-07,14;UBERON:0000117,2.47e-07,14;UBERON:0000171,2.47e-07,14;UBERON:0000170,2.47e-07,14;UBERON:0005597,2.47e-07,14;UBERON:0000118,2.47e-07,14;UBERON:0005153,3.78e-07,17;UBERON:0003104,7.87e-07,61;UBERON:0009142,7.87e-07,61;UBERON:0000160,8.99e-07,31 | |||
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| |||
|short_description=p1@Selenbp1 | |||
}} |
Revision as of 03:02, 14 September 2013
Short description: | p1@Selenbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Selenbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1724 |
Association with transcript: | 0bp_to_ENSMUST00000090839, ENSMUST00000139949, ENSMUST00000140757_5end |
EntrezGene: | Selenbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.