FFCP PHASE1:Hg19::chr8:120221345..120221393,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=13634|TSSclassifier=S|UniProt=|association_with_transcript=237bp_to_ENST00000531508_5end|description=CAGE_peak_3_at_MAL2_5end|id=chr8:120221345..120221393,+|ontology_enrichment_celltype=CL:0000066!5.71e-33!254;CL:0000223!9.17e-17!59;CL:0002076!9.62e-16!43;CL:0002251!8.61e-10!21|ontology_enrichment_celltype_v019=CL:0002076;9.05e-11;42!CL:0002251;1.86e-08;20|ontology_enrichment_celltype_v019_2=CL:0000066,8.94e-33,253;CL:0000223,2.04e-15,58;CL:0002076,1.73e-14,42;CL:0002251,1.98e-08,20|ontology_enrichment_development_v019=UBERON:0008947;7.95e-16;29!UBERON:0006595;1.12e-10;86!CL:0000223;1.28e-08;58!UBERON:0001041;4.78e-07;30|ontology_enrichment_disease=DOID:305!1.28e-49!106;DOID:0050687!6.23e-36!143;DOID:162!3.26e-17!235;DOID:299!1.68e-16!25;DOID:14566!3.27e-16!239;DOID:1749!3.66e-12!14|ontology_enrichment_disease_v019=DOID:299;7.16e-20;25!DOID:1749;1.05e-19;14!DOID:305;1.20e-19;106!DOID:0050687;2.29e-08;143!DOID:3119;2.10e-07;14!DOID:193;3.21e-07;29!DOID:120;8.33e-07;27|ontology_enrichment_disease_v019_2=DOID:305,2.94e-66,106;DOID:0050687,2.27e-45,143;DOID:162,6.12e-27,235;DOID:14566,6.38e-26,239;DOID:299,4.70e-20,25;DOID:1749,1.25e-19,14;DOID:3119,1.76e-07,14;DOID:7,3.17e-07,39;DOID:193,3.88e-07,29;DOID:120,9.00e-07,27|ontology_enrichment_uberon=UBERON:0001007!9.07e-20!155;UBERON:0001555!9.07e-20!155;UBERON:0007026!9.07e-20!155;UBERON:0004119!1.04e-19!169;UBERON:0000925!1.04e-19!169;UBERON:0006595!1.04e-19!169;UBERON:0004921!1.37e-17!129;UBERON:0004185!1.37e-17!129;UBERON:0000077!3.17e-16!130;UBERON:0000065!3.24e-13!53;UBERON:0001041!4.23e-13!98;UBERON:0001004!8.86e-13!72;UBERON:0000062!1.19e-11!511;UBERON:0000072!3.29e-11!46;UBERON:0008947!6.70e-11!38;UBERON:0003258!6.70e-11!38;UBERON:0000064!2.63e-10!219;UBERON:0001737!7.54e-10!9;UBERON:0005911!1.14e-09!82;UBERON:0000344!1.50e-09!12;UBERON:0001557!2.87e-09!19;UBERON:0000466!3.87e-09!126;UBERON:0005177!2.85e-08!107;UBERON:0000481!9.09e-08!347;UBERON:0000464!1.03e-07!104;UBERON:0003929!5.15e-07!54|ontology_enrichment_uberon_v019=UBERON:0001737;2.06e-15;9!UBERON:0001557;2.06e-15;9!UBERON:0000072;1.33e-13;37!UBERON:0000065;2.16e-12;44!UBERON:0002294;2.67e-09;7!UBERON:0001173;2.67e-09;7!UBERON:0001004;1.58e-08;65!UBERON:0000002;2.63e-07;6!UBERON:0001560;2.63e-07;6!UBERON:0003343;2.95e-07;4!UBERON:0004785;2.95e-07;4!UBERON:0000344;5.01e-07;20!UBERON:0000974;6.36e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.53e-18,145;UBERON:0001555,1.53e-18,145;UBERON:0007026,1.53e-18,145;UBERON:0004119,2.42e-18,160;UBERON:0000925,2.42e-18,160;UBERON:0006595,2.42e-18,160;UBERON:0004921,4.58e-18,118;UBERON:0000065,1.36e-17,54;UBERON:0000072,3.38e-16,47;UBERON:0001041,1.20e-15,87;UBERON:0001737,2.21e-15,9;UBERON:0001004,4.54e-15,74;UBERON:0008947,7.14e-15,38;UBERON:0003258,7.14e-15,38;UBERON:0001557,7.78e-13,19;UBERON:0001048,3.18e-07,160;UBERON:0003343,3.86e-07,4;UBERON:0004785,3.86e-07,4;UBERON:0000002,4.40e-07,6;UBERON:0001560,4.40e-07,6;UBERON:0005177,4.67e-07,101;UBERON:0002294,5.09e-07,9;UBERON:0001173,5.09e-07,9;UBERON:0004912,5.09e-07,9;UBERON:0000344,6.06e-07,20|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,6.28021051175185,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0.364295288292542,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0.243947412259191,0.132529768321485,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,5.67872640191251,4.21461725195254,3.37415441836875,3.86028904563379,2.61455332910887,4.03360052488864,4.1797705529651,3.53198637225623,3.8474715694639,0,0,0,0,0,0,0.590789906681404,0,2.09080345523293,0,0.439001141634502,1.1240175325762,0.502644862058154,0.555530670951178,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0,0.141775097242386,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0.40101294060657,3.49907757956406,0,0,0,5.41439535488894,13.7087300045858,0,0,2.74434235121477,0,0,0,0,0,0,4.84264918785573,0.831076008928724,0.671624264166535,0,0,0,0,0,0.618246069886334,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,5.78497203763423,3.65161127993702,0,4.6532579193553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63577591633371,0,1.08890984861323,0.564862804660675,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,2.94048259177238,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=13634 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=237bp_to_ENST00000531508_5end | |||
|description=CAGE_peak_3_at_MAL2_5end | |||
|id=chr8:120221345..120221393,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.71e-33!254;CL:0000223!9.17e-17!59;CL:0002076!9.62e-16!43;CL:0002251!8.61e-10!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.05e-11;42!CL:0002251;1.86e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.94e-33,253;CL:0000223,2.04e-15,58;CL:0002076,1.73e-14,42;CL:0002251,1.98e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.95e-16;29!UBERON:0006595;1.12e-10;86!CL:0000223;1.28e-08;58!UBERON:0001041;4.78e-07;30 | |||
|ontology_enrichment_disease=DOID:305!1.28e-49!106;DOID:0050687!6.23e-36!143;DOID:162!3.26e-17!235;DOID:299!1.68e-16!25;DOID:14566!3.27e-16!239;DOID:1749!3.66e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:299;7.16e-20;25!DOID:1749;1.05e-19;14!DOID:305;1.20e-19;106!DOID:0050687;2.29e-08;143!DOID:3119;2.10e-07;14!DOID:193;3.21e-07;29!DOID:120;8.33e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.94e-66,106;DOID:0050687,2.27e-45,143;DOID:162,6.12e-27,235;DOID:14566,6.38e-26,239;DOID:299,4.70e-20,25;DOID:1749,1.25e-19,14;DOID:3119,1.76e-07,14;DOID:7,3.17e-07,39;DOID:193,3.88e-07,29;DOID:120,9.00e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0001007!9.07e-20!155;UBERON:0001555!9.07e-20!155;UBERON:0007026!9.07e-20!155;UBERON:0004119!1.04e-19!169;UBERON:0000925!1.04e-19!169;UBERON:0006595!1.04e-19!169;UBERON:0004921!1.37e-17!129;UBERON:0004185!1.37e-17!129;UBERON:0000077!3.17e-16!130;UBERON:0000065!3.24e-13!53;UBERON:0001041!4.23e-13!98;UBERON:0001004!8.86e-13!72;UBERON:0000062!1.19e-11!511;UBERON:0000072!3.29e-11!46;UBERON:0008947!6.70e-11!38;UBERON:0003258!6.70e-11!38;UBERON:0000064!2.63e-10!219;UBERON:0001737!7.54e-10!9;UBERON:0005911!1.14e-09!82;UBERON:0000344!1.50e-09!12;UBERON:0001557!2.87e-09!19;UBERON:0000466!3.87e-09!126;UBERON:0005177!2.85e-08!107;UBERON:0000481!9.09e-08!347;UBERON:0000464!1.03e-07!104;UBERON:0003929!5.15e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.06e-15;9!UBERON:0001557;2.06e-15;9!UBERON:0000072;1.33e-13;37!UBERON:0000065;2.16e-12;44!UBERON:0002294;2.67e-09;7!UBERON:0001173;2.67e-09;7!UBERON:0001004;1.58e-08;65!UBERON:0000002;2.63e-07;6!UBERON:0001560;2.63e-07;6!UBERON:0003343;2.95e-07;4!UBERON:0004785;2.95e-07;4!UBERON:0000344;5.01e-07;20!UBERON:0000974;6.36e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.53e-18,145;UBERON:0001555,1.53e-18,145;UBERON:0007026,1.53e-18,145;UBERON:0004119,2.42e-18,160;UBERON:0000925,2.42e-18,160;UBERON:0006595,2.42e-18,160;UBERON:0004921,4.58e-18,118;UBERON:0000065,1.36e-17,54;UBERON:0000072,3.38e-16,47;UBERON:0001041,1.20e-15,87;UBERON:0001737,2.21e-15,9;UBERON:0001004,4.54e-15,74;UBERON:0008947,7.14e-15,38;UBERON:0003258,7.14e-15,38;UBERON:0001557,7.78e-13,19;UBERON:0001048,3.18e-07,160;UBERON:0003343,3.86e-07,4;UBERON:0004785,3.86e-07,4;UBERON:0000002,4.40e-07,6;UBERON:0001560,4.40e-07,6;UBERON:0005177,4.67e-07,101;UBERON:0002294,5.09e-07,9;UBERON:0001173,5.09e-07,9;UBERON:0004912,5.09e-07,9;UBERON:0000344,6.06e-07,20 | |||
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| |||
|short_description=p3@MAL2 | |||
}} |
Revision as of 03:19, 14 September 2013
Short description: | p3@MAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MAL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 237bp_to_ENST00000531508_5end |
EntrezGene: | NA |
HGNC: | 13634 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.94e-33 | 253 |
endodermal cell | 2.04e-15 | 58 |
endo-epithelial cell | 1.73e-14 | 42 |
epithelial cell of alimentary canal | 1.98e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
digestive system | 1.53e-18 | 145 |
digestive tract | 1.53e-18 | 145 |
primitive gut | 1.53e-18 | 145 |
endoderm-derived structure | 2.42e-18 | 160 |
endoderm | 2.42e-18 | 160 |
presumptive endoderm | 2.42e-18 | 160 |
subdivision of digestive tract | 4.58e-18 | 118 |
respiratory tract | 1.36e-17 | 54 |
segment of respiratory tract | 3.38e-16 | 47 |
foregut | 1.20e-15 | 87 |
larynx | 2.21e-15 | 9 |
respiratory system | 4.54e-15 | 74 |
respiratory primordium | 7.14e-15 | 38 |
endoderm of foregut | 7.14e-15 | 38 |
upper respiratory tract | 7.78e-13 | 19 |
primordium | 3.18e-07 | 160 |
mucosa of oral region | 3.86e-07 | 4 |
respiratory system mucosa | 3.86e-07 | 4 |
uterine cervix | 4.40e-07 | 6 |
neck of organ | 4.40e-07 | 6 |
trunk region element | 4.67e-07 | 101 |
biliary system | 5.09e-07 | 9 |
biliary tree | 5.09e-07 | 9 |
biliary bud | 5.09e-07 | 9 |
mucosa | 6.06e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.94e-66 | 106 |
cell type cancer | 2.27e-45 | 143 |
cancer | 6.12e-27 | 235 |
disease of cellular proliferation | 6.38e-26 | 239 |
adenocarcinoma | 4.70e-20 | 25 |
squamous cell carcinoma | 1.25e-19 | 14 |
gastrointestinal system cancer | 1.76e-07 | 14 |
disease of anatomical entity | 3.17e-07 | 39 |
reproductive organ cancer | 3.88e-07 | 29 |
female reproductive organ cancer | 9.00e-07 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.